Query 537021.9.peg.889_1
Match_columns 42
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 05:42:52 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_889.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2i6ha1 a.118.8.5 (A:1-179) Hy 4.2 89 0.0065 12.7 0.1 16 21-36 105-120 (179)
2 d1wi9a_ a.4.5.47 (A:) Hypothet 2.9 1.8E+02 0.013 11.3 0.6 11 12-22 12-22 (72)
3 d1eara2 d.58.38.1 (A:75-142) U 2.8 1.8E+02 0.013 11.2 1.1 19 6-24 12-30 (68)
4 d1jgta1 c.26.2.1 (A:210-508) b 2.5 2E+02 0.015 11.0 0.8 17 18-34 212-228 (299)
5 d3pvia_ c.52.1.6 (A:) Restrict 1.8 2.7E+02 0.019 10.4 0.7 14 15-28 137-150 (156)
6 d2etsa1 a.24.26.1 (A:1-110) Hy 1.7 2.8E+02 0.021 10.3 1.0 17 13-29 92-108 (110)
7 d1d8ja_ a.4.5.18 (A:) The cent 1.6 2.9E+02 0.021 10.3 0.2 11 10-20 14-24 (81)
8 d1rk8c_ b.72.3.1 (C:) Pym (Wit 1.6 2.7E+02 0.02 10.3 0.0 5 28-32 29-33 (33)
9 d1gzga_ c.1.10.3 (A:) 5-aminol 1.6 1.4E+02 0.01 11.8 -1.6 9 18-26 1-9 (329)
10 d1ug2a_ a.4.1.3 (A:) 2610100b2 1.6 2.9E+02 0.021 10.2 0.3 17 12-28 69-85 (95)
No 1
>d2i6ha1 a.118.8.5 (A:1-179) Hypothetical protein Atu0120 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=4.23 E-value=89 Score=12.74 Aligned_cols=16 Identities=19% Similarity=0.231 Sum_probs=9.2
Q ss_pred CHHHHHHHHHCCHHHH
Q ss_conf 4399998433008988
Q 537021.9.peg.8 21 YPLKRLLEGYMPLQHM 36 (42)
Q Consensus 21 yplkrllegymplqhm 36 (42)
.+...-.=-|||+.|.
T Consensus 105 l~~~~r~F~~mPl~HS 120 (179)
T d2i6ha1 105 VSEDLRVFFYLPFSHA 120 (179)
T ss_dssp SCHHHHGGGTHHHHTS
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 9999999988217630
No 2
>d1wi9a_ a.4.5.47 (A:) Hypothetical protein C20orf116 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.88 E-value=1.8e+02 Score=11.26 Aligned_cols=11 Identities=36% Similarity=0.322 Sum_probs=8.1
Q ss_pred HHHHHHCCCCH
Q ss_conf 99864224143
Q 537021.9.peg.8 12 TVNHIKNRKYP 22 (42)
Q Consensus 12 tvnhiknrkyp 22 (42)
-+|+||.+|.-
T Consensus 12 FI~~Ik~~Kvv 22 (72)
T d1wi9a_ 12 FINYIKKSKVV 22 (72)
T ss_dssp HHHHHHHCSEE
T ss_pred HHHHHHHCCEE
T ss_conf 99999987876
No 3
>d1eara2 d.58.38.1 (A:75-142) Urease metallochaperone UreE, C-terminal domain {Bacillus pasteurii [TaxId: 1474]}
Probab=2.85 E-value=1.8e+02 Score=11.20 Aligned_cols=19 Identities=21% Similarity=0.025 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHCCCCHHH
Q ss_conf 9999999986422414399
Q 537021.9.peg.8 6 LVHMMLTVNHIKNRKYPLK 24 (42)
Q Consensus 6 lvhmmltvnhiknrkyplk 24 (42)
..+|....-||-||--|+.
T Consensus 12 ~~el~~~a~hlGNRH~p~q 30 (68)
T d1eara2 12 MQEMGKMAFEIGNRHTMCI 30 (68)
T ss_dssp HHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHCCCCCCEE
T ss_conf 9999999998737770619
No 4
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=2.49 E-value=2e+02 Score=10.97 Aligned_cols=17 Identities=18% Similarity=0.432 Sum_probs=13.5
Q ss_pred CCCCHHHHHHHHHCCHH
Q ss_conf 24143999984330089
Q 537021.9.peg.8 18 NRKYPLKRLLEGYMPLQ 34 (42)
Q Consensus 18 nrkyplkrllegymplq 34 (42)
..|+.|++.++++.|-.
T Consensus 212 ~~K~iLR~a~~~~lP~~ 228 (299)
T d1jgta1 212 RDKWVLRAAMADALPAE 228 (299)
T ss_dssp EETHHHHHHHTTTSCHH
T ss_pred CCCHHHHHHHHCCCCHH
T ss_conf 76361699876525899
No 5
>d3pvia_ c.52.1.6 (A:) Restriction endonuclease PvuII {Proteus vulgaris [TaxId: 585]}
Probab=1.79 E-value=2.7e+02 Score=10.40 Aligned_cols=14 Identities=43% Similarity=0.705 Sum_probs=9.7
Q ss_pred HHHCCCCHHHHHHH
Q ss_conf 64224143999984
Q 537021.9.peg.8 15 HIKNRKYPLKRLLE 28 (42)
Q Consensus 15 hiknrkyplkrlle 28 (42)
.|.|.|-|||-..|
T Consensus 137 DINNPKIPlkyV~e 150 (156)
T d3pvia_ 137 DINNPKIPVKYVME 150 (156)
T ss_dssp CBCCCCEEHHHHHH
T ss_pred CCCCCCCCHHHHHH
T ss_conf 46898753799984
No 6
>d2etsa1 a.24.26.1 (A:1-110) Hypothetical protein MW1337 {Staphylococcus aureus [TaxId: 1280]}
Probab=1.65 E-value=2.8e+02 Score=10.26 Aligned_cols=17 Identities=29% Similarity=0.784 Sum_probs=10.8
Q ss_pred HHHHHCCCCHHHHHHHH
Q ss_conf 98642241439999843
Q 537021.9.peg.8 13 VNHIKNRKYPLKRLLEG 29 (42)
Q Consensus 13 vnhiknrkyplkrlleg 29 (42)
..+++.-+|-|+.++|+
T Consensus 92 ~e~~kSv~YtL~~i~d~ 108 (110)
T d2etsa1 92 IEKLKSVQYDLQNILDG 108 (110)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999851
No 7
>d1d8ja_ a.4.5.18 (A:) The central core domain of TFIIE beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.65 E-value=2.9e+02 Score=10.26 Aligned_cols=11 Identities=36% Similarity=0.398 Sum_probs=6.5
Q ss_pred HHHHHHHHCCC
Q ss_conf 99998642241
Q 537021.9.peg.8 10 MLTVNHIKNRK 20 (42)
Q Consensus 10 mltvnhiknrk 20 (42)
---|+|.|+|.
T Consensus 14 aKIV~~MK~RH 24 (81)
T d1d8ja_ 14 AKIVNYMKTRH 24 (81)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999887
No 8
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=1.62 E-value=2.7e+02 Score=10.33 Aligned_cols=5 Identities=60% Similarity=1.750 Sum_probs=0.0
Q ss_pred HHHCC
Q ss_conf 43300
Q 537021.9.peg.8 28 EGYMP 32 (42)
Q Consensus 28 egymp 32 (42)
|||.|
T Consensus 29 ~gyvP 33 (33)
T d1rk8c_ 29 DGYVP 33 (33)
T ss_dssp TTCCC
T ss_pred CCCCC
T ss_conf 57688
No 9
>d1gzga_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=1.59 E-value=1.4e+02 Score=11.82 Aligned_cols=9 Identities=67% Similarity=1.195 Sum_probs=0.0
Q ss_pred CCCCHHHHH
Q ss_conf 241439999
Q 537021.9.peg.8 18 NRKYPLKRL 26 (42)
Q Consensus 18 nrkyplkrl 26 (42)
||+||..|+
T Consensus 1 n~~fP~~R~ 9 (329)
T d1gzga_ 1 NRAYPYTRL 9 (329)
T ss_dssp CCCTTTCCT
T ss_pred CCCCCCCCC
T ss_conf 999999886
No 10
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=1.59 E-value=2.9e+02 Score=10.19 Aligned_cols=17 Identities=24% Similarity=0.254 Sum_probs=0.0
Q ss_pred HHHHHHCCCCHHHHHHH
Q ss_conf 99864224143999984
Q 537021.9.peg.8 12 TVNHIKNRKYPLKRLLE 28 (42)
Q Consensus 12 tvnhiknrkyplkrlle 28 (42)
+.+.|+||-.-|-+|.+
T Consensus 69 s~~qvr~Rf~~Lm~lf~ 85 (95)
T d1ug2a_ 69 TPVEVSHRFRELMQLFH 85 (95)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
Done!