RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= 537021.9.peg.889_1 (42 letters) >gnl|CDD|36217 KOG0999, KOG0999, KOG0999, Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]. Length = 772 Score = 24.3 bits (52), Expect = 7.7 Identities = 6/27 (22%), Positives = 13/27 (48%) Query: 10 MLTVNHIKNRKYPLKRLLEGYMPLQHM 36 + T+ + +K LK+ L Y + + Sbjct: 235 LETLQQEREQKNALKKELSQYRNAEDI 261 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.333 0.144 0.459 Gapped Lambda K H 0.267 0.0775 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 532,084 Number of extensions: 15745 Number of successful extensions: 72 Number of sequences better than 10.0: 1 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 2 Length of query: 42 Length of database: 6,263,737 Length adjustment: 16 Effective length of query: 26 Effective length of database: 5,917,993 Effective search space: 153867818 Effective search space used: 153867818 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 51 (23.3 bits)