RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.905_1
         (56 letters)



>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
           carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 532

 Score = 26.2 bits (56), Expect = 0.82
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 8   GVHGVDVEYVKHIESIMASLRKEEYEKMKEVRKSYNSFLKH 48
           G HG ++  V     +     +EE    K V K + +F ++
Sbjct: 445 GDHGDELFSVFGAPFLKEGASEEEIRLSKMVMKFWANFARN 485


>d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia
           trachomatis [TaxId: 813]}
          Length = 213

 Score = 23.3 bits (49), Expect = 5.0
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query: 12  VDVEYVKHIESIMASLRKEEYEKMKE 37
            DV + +  ++++  L K++ +K+ E
Sbjct: 171 ADVRHAREEKALIEMLLKDDADKVLE 196


>d1znna1 c.1.2.6 (A:18-271) Pyridoxal biosynthesis lyase PdxS
           {Bacillus stearothermophilus [TaxId: 1422]}
          Length = 254

 Score = 23.6 bits (51), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 1   MIIIDGLGVHGVDVEYVKHIESIMASLRK 29
           M+   G    G  VE V+H+  + A +RK
Sbjct: 128 MLRTKGEPGTGNIVEAVRHMRKVNAQIRK 156


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.136    0.365 

Gapped
Lambda     K      H
   0.267   0.0397    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 207,555
Number of extensions: 7042
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 10
Length of query: 56
Length of database: 2,407,596
Length adjustment: 27
Effective length of query: 29
Effective length of database: 2,036,886
Effective search space: 59069694
Effective search space used: 59069694
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.8 bits)