Query 537021.9.peg.912_1
Match_columns 47
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 02:30:32 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_912.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a6bb_ g.40.1.1 (B:) Zinc fin 8.4 56 0.0041 14.1 1.0 23 8-31 4-26 (40)
2 d2zjrz1 g.41.8.5 (Z:2-59) Ribo 6.2 82 0.006 13.3 1.0 18 8-25 38-55 (58)
3 d1vr3a1 b.82.1.6 (A:1-179) Aci 5.2 1.1E+02 0.0082 12.6 1.2 18 7-24 13-30 (179)
4 d2j0151 g.41.8.5 (5:2-60) Ribo 4.5 1.2E+02 0.0089 12.4 0.9 18 8-25 38-55 (59)
5 d1lp9e2 b.1.1.2 (E:118-198) T- 4.2 1.4E+02 0.0099 12.2 1.0 13 14-26 2-14 (79)
6 d1ikpa1 b.29.1.7 (A:2-251) Exo 3.7 1.6E+02 0.011 11.9 1.3 26 22-47 182-210 (250)
7 d1x4ta1 a.2.15.1 (A:7-86) Pre- 2.9 81 0.0059 13.3 -1.2 10 19-28 57-66 (80)
8 d1ewqa3 c.55.6.1 (A:121-266) D 2.5 1.6E+02 0.012 11.9 -0.0 19 23-41 125-143 (146)
9 d2vlqa1 a.28.2.1 (A:4-84) ImmE 2.3 2E+02 0.015 11.4 0.2 11 37-47 32-42 (81)
10 d1k81a_ g.59.1.1 (A:) Zinc-bin 1.9 2.7E+02 0.02 10.8 0.7 14 14-27 7-20 (36)
No 1
>d1a6bb_ g.40.1.1 (B:) Zinc finger protein ncp10 {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=8.42 E-value=56 Score=14.09 Aligned_cols=23 Identities=30% Similarity=0.520 Sum_probs=15.2
Q ss_pred HHCCCCCCCCCCEEECCCCHHHHH
Q ss_conf 407776777611001122001112
Q 537021.9.peg.9 8 TRLPHHKDPNTALYREKSHWTGLV 31 (47)
Q Consensus 8 trlphhkdpntalyrekshwtglv 31 (47)
-|.+-.|| .-|...|+.||.--.
T Consensus 4 rr~~L~kD-QCAyCke~GHW~~dC 26 (40)
T d1a6bb_ 4 RRSQLDRD-QCAYCKEKGHWAKDC 26 (40)
T ss_dssp TCCSCCSS-SCSSSCCTTCCTTSC
T ss_pred CCCCCCCH-HHHHHHHCCCHHHHC
T ss_conf 56766601-637775347054308
No 2
>d2zjrz1 g.41.8.5 (Z:2-59) Ribosomal protein L32p {Deinococcus radiodurans [TaxId: 1299]}
Probab=6.24 E-value=82 Score=13.30 Aligned_cols=18 Identities=33% Similarity=0.647 Sum_probs=13.6
Q ss_pred HHCCCCCCCCCCEEECCC
Q ss_conf 407776777611001122
Q 537021.9.peg.9 8 TRLPHHKDPNTALYREKS 25 (47)
Q Consensus 8 trlphhkdpntalyreks 25 (47)
..+||+-.|+...|+.+.
T Consensus 38 ~~lpHrvC~~CG~YkGr~ 55 (58)
T d2zjrz1 38 KKLSHHICPNCGYYDGRQ 55 (58)
T ss_dssp EECTTBCCTTTCBSSSBC
T ss_pred CCCCEEECCCCCCCCCEE
T ss_conf 756605679888399999
No 3
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.23 E-value=1.1e+02 Score=12.63 Aligned_cols=18 Identities=28% Similarity=0.552 Sum_probs=12.2
Q ss_pred HHHCCCCCCCCCCEEECC
Q ss_conf 540777677761100112
Q 537021.9.peg.9 7 RTRLPHHKDPNTALYREK 24 (47)
Q Consensus 7 rtrlphhkdpntalyrek 24 (47)
--|+|||..|+-.+--+.
T Consensus 13 d~r~ph~~~p~~~v~~~~ 30 (179)
T d1vr3a1 13 DPRKPHRAQPDRPVSLEQ 30 (179)
T ss_dssp CTTSCCBCSSCCBCCHHH
T ss_pred CCCCCCCCCCCCCCCHHH
T ss_conf 646676669897169999
No 4
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=4.49 E-value=1.2e+02 Score=12.45 Aligned_cols=18 Identities=22% Similarity=0.480 Sum_probs=13.3
Q ss_pred HHCCCCCCCCCCEEECCC
Q ss_conf 407776777611001122
Q 537021.9.peg.9 8 TRLPHHKDPNTALYREKS 25 (47)
Q Consensus 8 trlphhkdpntalyreks 25 (47)
..+||+-.|+...|+.+.
T Consensus 38 ~~~pHrvC~~CG~YkGr~ 55 (59)
T d2j0151 38 MKPPHTVCPECGYYAGRK 55 (59)
T ss_dssp CBCTTCBCTTTCCSSSCC
T ss_pred CCCCEEECCCCCEECCEE
T ss_conf 106606879898099998
No 5
>d1lp9e2 b.1.1.2 (E:118-198) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}
Probab=4.23 E-value=1.4e+02 Score=12.22 Aligned_cols=13 Identities=31% Similarity=0.657 Sum_probs=9.7
Q ss_pred CCCCCCEEECCCC
Q ss_conf 7776110011220
Q 537021.9.peg.9 14 KDPNTALYREKSH 26 (47)
Q Consensus 14 kdpntalyreksh 26 (47)
+||+.+.|+-++-
T Consensus 2 ~~p~p~vyql~~p 14 (79)
T d1lp9e2 2 QNPEPAVYQLKDP 14 (79)
T ss_dssp SSCCCEEEEEECT
T ss_pred CCCCCCEEECCCC
T ss_conf 8898645772688
No 6
>d1ikpa1 b.29.1.7 (A:2-251) Exotoxin A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=3.75 E-value=1.6e+02 Score=11.94 Aligned_cols=26 Identities=42% Similarity=0.612 Sum_probs=17.8
Q ss_pred ECC--CCH-HHHHHHHHCCCHHHHHHHCC
Q ss_conf 112--200-11122311130100576239
Q 537021.9.peg.9 22 REK--SHW-TGLVSATRRNLDLHFNKIVQ 47 (47)
Q Consensus 22 rek--shw-tglvsatrrnldlhfnkivq 47 (47)
||| ||| +|++-.---.+|--+|-|.|
T Consensus 182 R~KRWs~W~sG~~LC~L~~~D~vYNYl~Q 210 (250)
T d1ikpa1 182 REKRWSEWASGKVLCLLDQLDGVYNYLAQ 210 (250)
T ss_dssp --CCCHHHHSGGGGGGCGGGTTHHHHHHS
T ss_pred HHHHHHHHHCCCEEEEEEEHHHHHHHHHH
T ss_conf 02245654047158998403688888877
No 7
>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.92 E-value=81 Score=13.33 Aligned_cols=10 Identities=60% Similarity=1.185 Sum_probs=5.5
Q ss_pred CEEECCCCHH
Q ss_conf 1001122001
Q 537021.9.peg.9 19 ALYREKSHWT 28 (47)
Q Consensus 19 alyrekshwt 28 (47)
-|.+||.||-
T Consensus 57 kL~reK~~WE 66 (80)
T d1x4ta1 57 KLLREKGHWE 66 (80)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 8
>d1ewqa3 c.55.6.1 (A:121-266) DNA repair protein MutS, domain II {Thermus aquaticus [TaxId: 271]}
Probab=2.53 E-value=1.6e+02 Score=11.87 Aligned_cols=19 Identities=26% Similarity=0.380 Sum_probs=12.3
Q ss_pred CCCCHHHHHHHHHCCCHHH
Q ss_conf 1220011122311130100
Q 537021.9.peg.9 23 EKSHWTGLVSATRRNLDLH 41 (47)
Q Consensus 23 ekshwtglvsatrrnldlh 41 (47)
+.+..--+-++|+|||.|-
T Consensus 125 ~~~~~l~iD~~T~rnLEL~ 143 (146)
T d1ewqa3 125 DPGAFMRLPEATLRALEVF 143 (146)
T ss_dssp CGGGSCBCCHHHHHHTTSS
T ss_pred CCCCEEEECHHHHHHHCCC
T ss_conf 8999898688899874777
No 9
>d2vlqa1 a.28.2.1 (A:4-84) ImmE9 protein (Im9) {Escherichia coli [TaxId: 562]}
Probab=2.30 E-value=2e+02 Score=11.38 Aligned_cols=11 Identities=27% Similarity=0.603 Sum_probs=7.6
Q ss_pred CCHHHHHHHCC
Q ss_conf 30100576239
Q 537021.9.peg.9 37 NLDLHFNKIVQ 47 (47)
Q Consensus 37 nldlhfnkivq 47 (47)
+|-.||.+|++
T Consensus 32 ~l~~hF~~ite 42 (81)
T d2vlqa1 32 KLVTHFEEMTE 42 (81)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHCC
T ss_conf 99999999714
No 10
>d1k81a_ g.59.1.1 (A:) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=1.92 E-value=2.7e+02 Score=10.78 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=0.0
Q ss_pred CCCCCCEEECCCCH
Q ss_conf 77761100112200
Q 537021.9.peg.9 14 KDPNTALYREKSHW 27 (47)
Q Consensus 14 kdpntalyrekshw 27 (47)
+.|+|.|-+|.--|
T Consensus 7 ~spDT~l~ke~R~~ 20 (36)
T d1k81a_ 7 GKPDTKIIKEGRVH 20 (36)
T ss_dssp CSCEEEEEEETTEE
T ss_pred CCCCCEEEECCCEE
T ss_conf 89988989729889
Done!