Query         537021.9.peg.913_1
Match_columns 102
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Wed May 25 02:41:18 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_913.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2qqra2 b.34.9.1 (A:956-1011)   12.8      42   0.003   13.2   3.4   37   44-80     20-56  (56)
  2 g1tme.1 b.121.4.1 (4:,2:) Thei  11.3     7.5 0.00055   17.3  -2.6   19   77-95    201-219 (280)
  3 g1d4m.1 b.121.4.1 (4:,2:) Huma  10.5     8.3  0.0006   17.1  -2.6   19   77-95    242-260 (320)
  4 g1ncq.1 b.121.4.1 (D:,B:) Rhin  10.2     8.6 0.00063   17.0  -2.6   19   78-96    216-234 (295)
  5 d1bdsa_ g.9.1.1 (A:) BDs-I def   9.9      50  0.0037   12.8   1.2   18   67-84     10-27  (43)
  6 d1qled_ f.23.8.1 (D:) Bacteria   8.5      60  0.0044   12.4   1.5   18    7-24     26-43  (43)
  7 g1aym.1 b.121.4.1 (4:,2:) Rhin   7.7      13 0.00092   16.1  -2.6   19   78-96    219-237 (296)
  8 d1m56d_ f.23.8.1 (D:) Bacteria   7.4      68   0.005   12.1   1.6   18    7-24     25-42  (42)
  9 g1pvc.1 b.121.4.1 (4:,2:) Poli   7.2      14   0.001   15.9  -2.6   19   78-96    254-272 (334)
 10 d1foea2 b.55.1.1 (A:1240-1401)   7.1      70  0.0051   12.0   2.9   35   57-96    107-152 (162)

No 1  
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.82  E-value=42  Score=13.23  Aligned_cols=37  Identities=14%  Similarity=0.395  Sum_probs=31.3

Q ss_pred             EEEEEECCCCEEEEECCCCCCEEECCCEEEEECCCCC
Q ss_conf             5888725651256413765310115531465313586
Q 537021.9.peg.9   44 ITFFSCSESSFFSFSADSDSKAMWGRGELFKLSSSMP   80 (102)
Q Consensus        44 itffscsessffsfsadsdskamwgrgelfklsssmp   80 (102)
                      -.|.++.-+..+.-.-+..|.-|--|.++++|.-.+|
T Consensus        20 A~f~~~~~~~~YqVeFEDgSql~vKR~dIytl~EeLP   56 (56)
T d2qqra2          20 AKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELP   56 (56)
T ss_dssp             EEEEEEEEEEEEEEEETTSCEEEECGGGEEETTSCCC
T ss_pred             EEEEECCEEEEEEEEECCCCEEEEEHHHEECCCCCCC
T ss_conf             8997010169999998479688774457021356497


No 2  
>g1tme.1 b.121.4.1 (4:,2:) Theilovirus capsid proteins {Theiler's murine encephalomyelitis virus, strain da [TaxId: 12124]}
Probab=11.28  E-value=7.5  Score=17.30  Aligned_cols=19  Identities=32%  Similarity=0.513  Sum_probs=15.8

Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q ss_conf             3586021435654288776
Q 537021.9.peg.9   77 SSMPHGFIALLTNNIVKIV   95 (102)
Q Consensus        77 ssmphgfialltnnivkiv   95 (102)
                      .--||.+|-|-|||.+.|+
T Consensus       201 tifPHQ~INlRTNnsAti~  219 (280)
T g1tme.1         201 TVYPHQILNLRTNTTVDLE  219 (280)
T ss_dssp             GGSSEEEEETTTCSEEEEE
T ss_pred             EECCCCEECCCCCCEEEEE
T ss_conf             2247204117768847899


No 3  
>g1d4m.1 b.121.4.1 (4:,2:) Human enterovirus B coat proteins {Human coxsackievirus A9 [TaxId: 12067]}
Probab=10.53  E-value=8.3  Score=17.07  Aligned_cols=19  Identities=47%  Similarity=0.651  Sum_probs=16.1

Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q ss_conf             3586021435654288776
Q 537021.9.peg.9   77 SSMPHGFIALLTNNIVKIV   95 (102)
Q Consensus        77 ssmphgfialltnnivkiv   95 (102)
                      .-.||.+|-|-|||.+.|+
T Consensus       242 tifPHQ~INlRTNnsAti~  260 (320)
T g1d4m.1         242 TIYPHQWINLRTNNSATIV  260 (320)
T ss_dssp             GGSSEEEEETTTCSEEEEE
T ss_pred             HHCCCCCCCCCCCCEEEEE
T ss_conf             2121102444668735898


No 4  
>g1ncq.1 b.121.4.1 (D:,B:) Rhinovirus coat proteins {Human rhinovirus B 14 (HRV-14) [TaxId: 12131]}
Probab=10.25  E-value=8.6  Score=16.98  Aligned_cols=19  Identities=53%  Similarity=0.700  Sum_probs=16.0

Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q ss_conf             5860214356542887764
Q 537021.9.peg.9   78 SMPHGFIALLTNNIVKIVK   96 (102)
Q Consensus        78 smphgfialltnnivkivk   96 (102)
                      -.||.+|-|-|||.+.|+-
T Consensus       216 ifPHQ~INlRTNnsAti~v  234 (295)
T g1ncq.1         216 IFPHQFINLRTNNTATIVI  234 (295)
T ss_dssp             GSSEEEEETTTCSEEEEEE
T ss_pred             CCCHHCCCCCCCCEEEEEE
T ss_conf             2656400377687578997


No 5  
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=9.92  E-value=50  Score=12.80  Aligned_cols=18  Identities=39%  Similarity=0.728  Sum_probs=15.2

Q ss_pred             ECCCEEEEECCCCCHHHH
Q ss_conf             155314653135860214
Q 537021.9.peg.9   67 WGRGELFKLSSSMPHGFI   84 (102)
Q Consensus        67 wgrgelfklsssmphgfi   84 (102)
                      =|||+|.-|...-|.|+-
T Consensus        10 pgrgdlwilrgtcpggyg   27 (43)
T d1bdsa_          10 PGRGDLWILRGTCPGGYG   27 (43)
T ss_dssp             CSCCEEECSCSSCCTTTC
T ss_pred             CCCCCEEEEECCCCCCCC
T ss_conf             887747899532688753


No 6  
>d1qled_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Paracoccus denitrificans [TaxId: 266]}
Probab=8.55  E-value=60  Score=12.37  Aligned_cols=18  Identities=39%  Similarity=0.776  Sum_probs=10.4

Q ss_pred             ECCCHHHHHHHHHHHHCC
Q ss_conf             500099999999998538
Q 537021.9.peg.9    7 WENVFFITIFSFLALFGS   24 (102)
Q Consensus         7 wenvffitifsflalfgs   24 (102)
                      |-.+.-|.+.-|||+|.+
T Consensus        26 ~~~i~~i~~liflAi~ns   43 (43)
T d1qled_          26 WVSILSIAVLVFLALANS   43 (43)
T ss_dssp             HHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999629


No 7  
>g1aym.1 b.121.4.1 (4:,2:) Rhinovirus coat proteins {Human rhinovirus 16, (HRV-16) [TaxId: 31708]}
Probab=7.67  E-value=13  Score=16.06  Aligned_cols=19  Identities=37%  Similarity=0.642  Sum_probs=15.7

Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q ss_conf             5860214356542887764
Q 537021.9.peg.9   78 SMPHGFIALLTNNIVKIVK   96 (102)
Q Consensus        78 smphgfialltnnivkivk   96 (102)
                      -.||.+|-|-|||.+.|+-
T Consensus       219 ifPHQ~INlRTNnsAti~v  237 (296)
T g1aym.1         219 IFPHQFINLRSNNSATLIV  237 (296)
T ss_dssp             GSSEEEEETTTCSEEEEEE
T ss_pred             ECCHHEECCCCCCEEEEEE
T ss_conf             5475410177687478997


No 8  
>d1m56d_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=7.40  E-value=68  Score=12.08  Aligned_cols=18  Identities=33%  Similarity=0.706  Sum_probs=10.3

Q ss_pred             ECCCHHHHHHHHHHHHCC
Q ss_conf             500099999999998538
Q 537021.9.peg.9    7 WENVFFITIFSFLALFGS   24 (102)
Q Consensus         7 wenvffitifsflalfgs   24 (102)
                      |--+.-|.+.-|||+|.|
T Consensus        25 ~~~i~~i~~liflAi~ns   42 (42)
T d1m56d_          25 WAAVVIVAALIFLALANA   42 (42)
T ss_dssp             HHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999639


No 9  
>g1pvc.1 b.121.4.1 (4:,2:) Poliovirus coat proteins {Poliovirus type 3, strain Sabin [TaxId: 12086]}
Probab=7.23  E-value=14  Score=15.88  Aligned_cols=19  Identities=47%  Similarity=0.557  Sum_probs=16.0

Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q ss_conf             5860214356542887764
Q 537021.9.peg.9   78 SMPHGFIALLTNNIVKIVK   96 (102)
Q Consensus        78 smphgfialltnnivkivk   96 (102)
                      -.||-+|-|-|||...|+-
T Consensus       254 ifPHQ~INLRTNnsAtI~v  272 (334)
T g1pvc.1         254 VYPHQIINLRTNNSATIVL  272 (334)
T ss_dssp             GSSEEEEETTTCSEEEEEE
T ss_pred             CCCHHEEECCCCCEEEEEE
T ss_conf             0565545367787578997


No 10 
>d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.11  E-value=70  Score=12.00  Aligned_cols=35  Identities=37%  Similarity=0.561  Sum_probs=23.8

Q ss_pred             EECCCCCCEEE----------CCCE-EEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             41376531011----------5531-4653135860214356542887764
Q 537021.9.peg.9   57 FSADSDSKAMW----------GRGE-LFKLSSSMPHGFIALLTNNIVKIVK   96 (102)
Q Consensus        57 fsadsdskamw----------grge-lfklsssmphgfialltnnivkivk   96 (102)
                      -.+|+++.++|          ||-| .|.|.+|-|.     ..|+++|.++
T Consensus       107 ~~~~~es~~vwEiiH~kSe~egRpE~vfqlc~St~E-----~K~~flK~Ir  152 (162)
T d1foea2         107 PSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPE-----SRKDFLKSVH  152 (162)
T ss_dssp             CCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHH-----HHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHH-----HHHHHHHHHH
T ss_conf             666787655799996023115886059998629978-----9888999999


Done!