BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 537021.9.peg.913_1
         (102 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>537021.9.peg.913_1 
          Length = 102

 Score =  196 bits (498), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 1   VYFLLFWENVFFITIFSFLALFGSSVSFFSCSENCFLGFSCDSITFFSCSESSFFSFSAD 60
           VYFLLFWENVFFITIFSFLALFGSSVSFFSCSENCFLGFSCDSITFFSCSESSFFSFSAD
Sbjct: 1   VYFLLFWENVFFITIFSFLALFGSSVSFFSCSENCFLGFSCDSITFFSCSESSFFSFSAD 60

Query: 61  SDSKAMWGRGELFKLSSSMPHGFIALLTNNIVKIVKYFFIPS 102
           SDSKAMWGRGELFKLSSSMPHGFIALLTNNIVKIVKYFFIPS
Sbjct: 61  SDSKAMWGRGELFKLSSSMPHGFIALLTNNIVKIVKYFFIPS 102


>537021.9.peg.916_1 
          Length = 46

 Score = 25.4 bits (54), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 11/17 (64%), Positives = 16/17 (94%)

Query: 44 ITFFSCSESSFFSFSAD 60
          +TFFSCS+++FFSFS +
Sbjct: 3  VTFFSCSKNAFFSFSDN 19



 Score = 21.9 bits (45), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 10/15 (66%), Positives = 12/15 (80%)

Query: 26 VSFFSCSENCFLGFS 40
          V+FFSCS+N F  FS
Sbjct: 3  VTFFSCSKNAFFSFS 17


>gi|254780974|ref|YP_003065387.1| adenylosuccinate lyase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 435

 Score = 23.9 bits (50), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 74  KLSSSMPHGFIALLTNNIV---KIVKYFFIPS 102
           K SSSMPH    +LT N+    ++++   IP+
Sbjct: 263 KGSSSMPHKRNPILTENLTGLSRLIRSHVIPA 294


>gi|254780918|ref|YP_003065331.1| glycosyl transferase family protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 623

 Score = 21.2 bits (43), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 63  SKAMWGRGELFKLSSSMPHGFIALLTNNI 91
           ++  + R +L+K S  + HG + +  NNI
Sbjct: 443 ARLWYRRKKLWKRSKRLQHGGVIMGINNI 471


>gi|254780439|ref|YP_003064852.1| carbamoyl phosphate synthase large subunit [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 1162

 Score = 20.8 bits (42), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 29  FSCSENCFLGFSCDSITFFSCSESSFFSFSADSD 62
           F C + C   FS  +   +S  E++F +     D
Sbjct: 580 FKCVDTCAGEFSSPTSYMYSTYETNFINKPVSED 613


>gi|254781159|ref|YP_003065572.1| hypothetical protein CLIBASIA_05330 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 67

 Score = 20.0 bits (40), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 6  FWENVFFITIFSFLAL 21
           W  VF IT+FS + L
Sbjct: 1  MWRRVFAITLFSSIPL 16


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.333    0.141    0.454 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,034
Number of Sequences: 1233
Number of extensions: 2041
Number of successful extensions: 15
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 102
length of database: 328,796
effective HSP length: 62
effective length of query: 40
effective length of database: 252,350
effective search space: 10094000
effective search space used: 10094000
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 32 (16.9 bits)