Query 537021.9.peg.916_1 Match_columns 46 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed May 25 04:05:39 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_916.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1zcza2 c.97.1.4 (A:158-452) A 7.7 28 0.002 14.9 -0.8 12 9-20 240-251 (295) 2 d1g8ma2 c.97.1.4 (A:201-593) A 7.4 31 0.0023 14.7 -0.7 13 8-20 337-349 (393) 3 d1cuka3 b.40.4.2 (A:1-64) DNA 7.4 80 0.0058 12.8 2.3 19 19-37 46-64 (64) 4 d1bvsa3 b.40.4.2 (A:1-63) DNA 5.1 1.1E+02 0.008 12.1 2.0 19 19-37 45-63 (63) 5 d1ni3a2 d.15.10.2 (A:307-388) 3.3 1.6E+02 0.012 11.4 1.7 14 2-15 1-14 (82) 6 d1dmla1 d.131.1.2 (A:29-169) U 2.9 1.8E+02 0.013 11.2 0.7 15 5-19 22-36 (141) 7 d2qfia2 f.59.1.1 (A:5-208) Fer 2.8 88 0.0064 12.6 -1.1 17 26-42 28-44 (204) 8 d2je8a2 b.1.4.1 (A:784-864) Be 2.8 1.8E+02 0.013 11.1 0.8 10 14-23 39-48 (81) 9 d1jala2 d.15.10.2 (A:279-363) 2.5 2E+02 0.015 10.9 1.8 10 2-11 1-10 (85) 10 d1g1pa_ g.3.6.1 (A:) Conotoxin 2.3 1.6E+02 0.012 11.4 -0.3 11 21-31 9-19 (32) No 1 >d1zcza2 c.97.1.4 (A:158-452) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]} Probab=7.71 E-value=28 Score=14.88 Aligned_cols=12 Identities=42% Similarity=0.971 Sum_probs=7.2 Q ss_pred CCCEEEEECCCC Q ss_conf 565045650221 Q 537021.9.peg.9 9 SKNAFFSFSDNV 20 (46) Q Consensus 9 sknaffsfsdnv 20 (46) .-.|||.|.|++ T Consensus 240 aSDAFFPF~D~i 251 (295) T d1zcza2 240 ASDAFFPFPDSL 251 (295) T ss_dssp EESSCCSSHHHH T ss_pred ECCCCCCCCHHH T ss_conf 724576885689 No 2 >d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} Probab=7.40 E-value=31 Score=14.67 Aligned_cols=13 Identities=62% Similarity=0.986 Sum_probs=8.6 Q ss_pred ECCCEEEEECCCC Q ss_conf 1565045650221 Q 537021.9.peg.9 8 CSKNAFFSFSDNV 20 (46) Q Consensus 8 csknaffsfsdnv 20 (46) +.-.|||.|.|++ T Consensus 337 lASDAFFPF~D~i 349 (393) T d1g8ma2 337 LSSDAFFPFRDNV 349 (393) T ss_dssp EEESSCCSSTHHH T ss_pred EEECCCCCCCHHH T ss_conf 9802686875689 No 3 >d1cuka3 b.40.4.2 (A:1-64) DNA helicase RuvA subunit, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=7.39 E-value=80 Score=12.77 Aligned_cols=19 Identities=26% Similarity=0.551 Sum_probs=14.9 Q ss_pred CCEEEEEEEECCEEEEEEE Q ss_conf 2102565641540477862 Q 537021.9.peg.9 19 NVFNSLVILSNSLSLFSFS 37 (46) Q Consensus 19 nvfnslvilsnslslfsfs 37 (46) .+|-.+.+-.++.+||.|| T Consensus 46 ~l~t~~~vrED~~~LyGFs 64 (64) T d1cuka3 46 IVFTHFVVREDAQLLYGFN 64 (64) T ss_dssp EEEEEEEEETTEEEEEEES T ss_pred EEEEEEEEEECCCEEECCC T ss_conf 9999999900898935619 No 4 >d1bvsa3 b.40.4.2 (A:1-63) DNA helicase RuvA subunit, N-terminal domain {Mycobacterium leprae [TaxId: 1769]} Probab=5.08 E-value=1.1e+02 Score=12.10 Aligned_cols=19 Identities=26% Similarity=0.676 Sum_probs=14.9 Q ss_pred CCEEEEEEEECCEEEEEEE Q ss_conf 2102565641540477862 Q 537021.9.peg.9 19 NVFNSLVILSNSLSLFSFS 37 (46) Q Consensus 19 nvfnslvilsnslslfsfs 37 (46) .++-.+++-.++.+||.|+ T Consensus 45 ~l~t~~~vrED~~~LyGFs 63 (63) T d1bvsa3 45 RLVTAMVVREDSMTLYGFS 63 (63) T ss_dssp CCCEEEEEETTEEEEEECS T ss_pred EEEEEEEEECCCCEEEEEC T ss_conf 9999999921897766229 No 5 >d1ni3a2 d.15.10.2 (A:307-388) YchF GTP-binding protein, C-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Probab=3.33 E-value=1.6e+02 Score=11.37 Aligned_cols=14 Identities=29% Similarity=0.847 Sum_probs=9.6 Q ss_pred EEEEEEECCCEEEE Q ss_conf 78999615650456 Q 537021.9.peg.9 2 LVTFFSCSKNAFFS 15 (46) Q Consensus 2 lvtffscsknaffs 15 (46) |.|||.|..+---+ T Consensus 1 LitffT~G~~Evra 14 (82) T d1ni3a2 1 LINYFTCGEDEVRS 14 (82) T ss_dssp EEEEEECCSSEEEE T ss_pred CCEEECCCCCCEEE T ss_conf 91077479770467 No 6 >d1dmla1 d.131.1.2 (A:29-169) UL42 {Human herpesvirus type 1 [TaxId: 10298]} Probab=2.92 E-value=1.8e+02 Score=11.15 Aligned_cols=15 Identities=7% Similarity=0.213 Sum_probs=12.0 Q ss_pred EEEECCCEEEEECCC Q ss_conf 996156504565022 Q 537021.9.peg.9 5 FFSCSKNAFFSFSDN 19 (46) Q Consensus 5 ffscsknaffsfsdn 19 (46) +.+|-||+|..|++. T Consensus 22 l~~~Lkd~~LvF~e~ 36 (141) T d1dmla1 22 LRTSLLDSLLVMGDR 36 (141) T ss_dssp GTTTTSSCEEEEETT T ss_pred HHHHHCCCEEEECCC T ss_conf 888620738986388 No 7 >d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Probab=2.84 E-value=88 Score=12.57 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=12.0 Q ss_pred EEECCEEEEEEECCCCC Q ss_conf 64154047786222224 Q 537021.9.peg.9 26 ILSNSLSLFSFSAHSCA 42 (46) Q Consensus 26 ilsnslslfsfsahsca 42 (46) +++||+++++...|+.. T Consensus 28 ~~t~S~allada~~s~~ 44 (204) T d2qfia2 28 WYTGSVSILAALVDSLV 44 (204) T ss_dssp CCTTSSCCCCCCCTTHH T ss_pred HHHCHHHHHHHHHHHHH T ss_conf 99552999999999999 No 8 >d2je8a2 b.1.4.1 (A:784-864) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]} Probab=2.79 E-value=1.8e+02 Score=11.08 Aligned_cols=10 Identities=40% Similarity=0.683 Sum_probs=7.0 Q ss_pred EEECCCCEEE Q ss_conf 5650221025 Q 537021.9.peg.9 14 FSFSDNVFNS 23 (46) Q Consensus 14 fsfsdnvfns 23 (46) -.||||-|.- T Consensus 39 g~fSDN~FdL 48 (81) T d2je8a2 39 ARYSDNFFDL 48 (81) T ss_dssp CEESCCSEEE T ss_pred CEEECCEEEE T ss_conf 6680676876 No 9 >d1jala2 d.15.10.2 (A:279-363) YchF GTP-binding protein, C-terminal domain {Haemophilus influenzae [TaxId: 727]} Probab=2.51 E-value=2e+02 Score=10.90 Aligned_cols=10 Identities=30% Similarity=0.620 Sum_probs=0.0 Q ss_pred EEEEEEECCC Q ss_conf 7899961565 Q 537021.9.peg.9 2 LVTFFSCSKN 11 (46) Q Consensus 2 lvtffscskn 11 (46) |.|||.|..+ T Consensus 1 L~tFfT~G~~ 10 (85) T d1jala2 1 LQTYFTAGVK 10 (85) T ss_dssp EEEEEEECSS T ss_pred CCCEECCCCC T ss_conf 9556557998 No 10 >d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]} Probab=2.30 E-value=1.6e+02 Score=11.38 Aligned_cols=11 Identities=64% Similarity=0.785 Sum_probs=0.0 Q ss_pred EEEEEEEECCE Q ss_conf 02565641540 Q 537021.9.peg.9 21 FNSLVILSNSL 31 (46) Q Consensus 21 fnslvilsnsl 31 (46) |-||-||.|.| T Consensus 9 fcslpilkngl 19 (32) T d1g1pa_ 9 FCSLPILKNGL 19 (32) T ss_dssp BCCCSSSSCCC T ss_pred CEECHHHCCCC T ss_conf 15033335771 Done!