BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 537021.9.peg.916_1
         (46 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>537021.9.peg.916_1 
          Length = 46

 Score = 85.9 bits (211), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/46 (100%), Positives = 46/46 (100%)

Query: 1  LLVTFFSCSKNAFFSFSDNVFNSLVILSNSLSLFSFSAHSCANREE 46
          LLVTFFSCSKNAFFSFSDNVFNSLVILSNSLSLFSFSAHSCANREE
Sbjct: 1  LLVTFFSCSKNAFFSFSDNVFNSLVILSNSLSLFSFSAHSCANREE 46


>537021.9.peg.913_1 
          Length = 102

 Score = 22.3 bits (46), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 10/15 (66%), Positives = 12/15 (80%)

Query: 3  VTFFSCSKNAFFSFS 17
          V+FFSCS+N F  FS
Sbjct: 26 VSFFSCSENCFLGFS 40


>gi|254780395|ref|YP_003064808.1| organic solvent tolerance protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 762

 Score = 20.4 bits (41), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 24  LVILSNSLSLFSFSAH 39
           LVI  NS + F+FS H
Sbjct: 248 LVISDNSDATFTFSPH 263


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.327    0.131    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,879
Number of Sequences: 1233
Number of extensions: 644
Number of successful extensions: 7
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 46
length of database: 328,796
effective HSP length: 19
effective length of query: 27
effective length of database: 305,369
effective search space:  8244963
effective search space used:  8244963
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 31 (16.5 bits)