Query 537021.9.peg.930_1
Match_columns 51
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 02:56:26 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_930.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hq4a1 d.342.1.1 (A:1-152) Hy 11.1 9.7 0.00071 17.2 -2.1 12 6-17 123-134 (152)
2 d1x62a1 g.39.1.3 (A:43-73) PDZ 5.6 36 0.0027 14.2 -1.1 11 7-17 6-16 (31)
3 d1x64a2 g.39.1.3 (A:53-83) PDZ 5.1 39 0.0028 14.0 -1.3 11 7-17 6-16 (31)
4 d2es4d1 a.137.15.1 (D:53-332) 4.4 1.2E+02 0.0084 11.5 0.8 10 15-24 35-44 (280)
5 d2jfga2 c.59.1.1 (A:298-437) U 3.7 1.3E+02 0.0097 11.2 2.1 14 9-22 124-137 (140)
6 d1tlta2 d.81.1.5 (A:128-267) V 3.4 1.4E+02 0.01 11.0 2.2 26 6-31 22-49 (140)
7 d2bw3a1 a.270.1.1 (A:79-162) T 3.3 1.3E+02 0.0094 11.3 0.3 26 24-49 23-48 (84)
8 d1k8ke_ a.148.1.1 (E:) Arp2/3 3.1 1.5E+02 0.011 10.9 2.8 30 3-32 52-81 (174)
9 d1nkra1 b.1.1.4 (A:6-101) Kill 2.9 55 0.004 13.2 -2.1 18 3-20 59-76 (96)
10 d1ugna1 b.1.1.4 (A:2-97) Ligan 2.9 55 0.004 13.2 -2.1 17 3-19 59-75 (96)
No 1
>d2hq4a1 d.342.1.1 (A:1-152) Hypothetical protein PH1570 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=11.15 E-value=9.7 Score=17.19 Aligned_cols=12 Identities=58% Similarity=1.052 Sum_probs=7.9
Q ss_pred CCCCHHHHHHHH
Q ss_conf 366842303399
Q 537021.9.peg.9 6 NNYNLDERGRFF 17 (51)
Q Consensus 6 nnynldergrff 17 (51)
+|+-||+|||.|
T Consensus 123 knFiLD~rg~Lf 134 (152)
T d2hq4a1 123 NYFILDPRGRLF 134 (152)
T ss_dssp SSEEECTTSEEE
T ss_pred CCEEECCCCEEE
T ss_conf 403677886399
No 2
>d1x62a1 g.39.1.3 (A:43-73) PDZ and LIM domain protein 1 Elfin {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.63 E-value=36 Score=14.17 Aligned_cols=11 Identities=45% Similarity=0.981 Sum_probs=8.0
Q ss_pred CCCHHHHHHHH
Q ss_conf 66842303399
Q 537021.9.peg.9 7 NYNLDERGRFF 17 (51)
Q Consensus 7 nynldergrff 17 (51)
.-||..||-||
T Consensus 6 g~NLKqrG~Ff 16 (31)
T d1x62a1 6 GTNLKQKGHFF 16 (31)
T ss_dssp CCCHHHHCCEE
T ss_pred CCCHHHCCEEE
T ss_conf 54831344378
No 3
>d1x64a2 g.39.1.3 (A:53-83) PDZ and LIM domain protein 3, PDLIM3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.13 E-value=39 Score=14.03 Aligned_cols=11 Identities=55% Similarity=1.068 Sum_probs=7.9
Q ss_pred CCCHHHHHHHH
Q ss_conf 66842303399
Q 537021.9.peg.9 7 NYNLDERGRFF 17 (51)
Q Consensus 7 nynldergrff 17 (51)
.-||..||-||
T Consensus 6 g~NLKqrG~Ff 16 (31)
T d1x64a2 6 NLNLKQKGYFF 16 (31)
T ss_dssp CCCTTTSCCEE
T ss_pred CCCHHHCCEEE
T ss_conf 53831354488
No 4
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) {Burkholderia glumae [TaxId: 337]}
Probab=4.40 E-value=1.2e+02 Score=11.52 Aligned_cols=10 Identities=40% Similarity=0.697 Sum_probs=7.8
Q ss_pred HHHHHHHHHH
Q ss_conf 3999999999
Q 537021.9.peg.9 15 RFFCYFLSLL 24 (51)
Q Consensus 15 rffcyflsll 24 (51)
.||-||||.+
T Consensus 35 ~~fdYfls~~ 44 (280)
T d2es4d1 35 EFFDYCLTAQ 44 (280)
T ss_dssp HHHHHHHTTG
T ss_pred HHHHHHCCCC
T ss_conf 7887861477
No 5
>d2jfga2 c.59.1.1 (A:298-437) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=3.70 E-value=1.3e+02 Score=11.20 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=10.1
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 84230339999999
Q 537021.9.peg.9 9 NLDERGRFFCYFLS 22 (51)
Q Consensus 9 nldergrffcyfls 22 (51)
|..|||..|.-...
T Consensus 124 nfeeRG~~F~~lV~ 137 (140)
T d2jfga2 124 NFEQRGNEFARLAK 137 (140)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
T ss_conf 99999999999999
No 6
>d1tlta2 d.81.1.5 (A:128-267) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=3.41 E-value=1.4e+02 Score=11.05 Aligned_cols=26 Identities=23% Similarity=-0.042 Sum_probs=18.6
Q ss_pred CCCCH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 36684--230339999999999985667
Q 537021.9.peg.9 6 NNYNL--DERGRFFCYFLSLLIVDTLRS 31 (51)
Q Consensus 6 nnynl--dergrffcyflsllivdtlrs 31 (51)
|-.|. ...-|||-|=.-+-+|||+|-
T Consensus 22 nR~n~~~P~d~r~~l~DDfIHvvDT~~~ 49 (140)
T d1tlta2 22 HRSNSVGPHDLYFTLLDDYLHVVDTALW 49 (140)
T ss_dssp CCSSCCCSSCHHHHHHHTHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEHHHHHHHHHHHHH
T ss_conf 3568889886013402435678888898
No 7
>d2bw3a1 a.270.1.1 (A:79-162) Transposase Hermes, dimerisation domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=3.35 E-value=1.3e+02 Score=11.28 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99985667799999999999988740
Q 537021.9.peg.9 24 LIVDTLRSFSLFQHLWLKRLSSILVQ 49 (51)
Q Consensus 24 livdtlrsfslfqhlwlkrlssilvq 49 (51)
-.|..-|+||.+..--||.|-++++.
T Consensus 23 W~V~nCRp~siv~dsGlkklv~~fl~ 48 (84)
T d2bw3a1 23 WVVRDCRPFSAVSGSGFIDMIKFFIK 48 (84)
T ss_dssp HHHHTTCCGGGGGCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHCCCCHHHHHHHHHH
T ss_conf 99964855300035229999999999
No 8
>d1k8ke_ a.148.1.1 (E:) Arp2/3 complex 21 kDa subunit ARPC3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.14 E-value=1.5e+02 Score=10.89 Aligned_cols=30 Identities=23% Similarity=0.578 Sum_probs=18.8
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 121366842303399999999999856677
Q 537021.9.peg.9 3 FFFNNYNLDERGRFFCYFLSLLIVDTLRSF 32 (51)
Q Consensus 3 fffnnynldergrffcyflsllivdtlrsf 32 (51)
-||.||....-+--.--++.+.|-+-|+.+
T Consensus 52 ~fFrnfeik~~aDR~LIYltlyiseCL~kl 81 (174)
T d1k8ke_ 52 VFFKNYEIKNEADRTLIYITLYISECLKKL 81 (174)
T ss_dssp TTCSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCEEEEEHHHHHHHHHHHH
T ss_conf 776326457863146623699999999998
No 9
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Probab=2.89 E-value=55 Score=13.24 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=14.1
Q ss_pred EEECCCCHHHHHHHHHHH
Q ss_conf 121366842303399999
Q 537021.9.peg.9 3 FFFNNYNLDERGRFFCYF 20 (51)
Q Consensus 3 fffnnynldergrffcyf 20 (51)
|.+.+-+-...|++-||.
T Consensus 59 F~l~~v~~~~~G~Y~C~y 76 (96)
T d1nkra1 59 FSISRMTQDLAGTYRCYG 76 (96)
T ss_dssp EEESSCCGGGCEEEEEEE
T ss_pred EEECCCCCCCCEEEEEEE
T ss_conf 997446736696799977
No 10
>d1ugna1 b.1.1.4 (A:2-97) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.88 E-value=55 Score=13.23 Aligned_cols=17 Identities=29% Similarity=0.759 Sum_probs=0.0
Q ss_pred EEECCCCHHHHHHHHHH
Q ss_conf 12136684230339999
Q 537021.9.peg.9 3 FFFNNYNLDERGRFFCY 19 (51)
Q Consensus 3 fffnnynldergrffcy 19 (51)
|.+.+-.....|++-||
T Consensus 59 F~i~~v~~~~~G~Y~C~ 75 (96)
T d1ugna1 59 FPIPSITWEHTGRYRCY 75 (96)
T ss_dssp EEESSCCGGGCEEEEEE
T ss_pred EEEEECCHHHCCEEEEE
T ss_conf 99970487889739999
Done!