Query 537021.9.peg.931_1 Match_columns 45 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 33803 Date Wed May 25 04:11:46 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_931.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >1i5p_A Pesticidial crystal pr 19.8 27 0.0008 17.1 0.1 15 27-41 17-31 (239) 2 >1ckm_A MRNA capping enzyme; n 18.8 28 0.00084 16.9 0.0 12 13-24 56-67 (78) 3 >2cw1_A SN4M; lambda CRO fold, 11.8 91 0.0027 14.2 1.1 22 8-29 6-32 (65) 4 >1lfk_A OXYB, P450 monooxygena 9.0 1.1E+02 0.0032 13.8 0.7 20 24-43 31-55 (149) 5 >2wb6_A AFV1-102; archaeal vir 7.9 1.8E+02 0.0052 12.7 1.4 25 12-36 29-53 (77) 6 >2gu0_A Nonstructural protein 7.4 1.4E+02 0.0041 13.3 0.6 15 6-20 28-42 (148) 7 >1wr8_A Phosphoglycolate phosp 6.6 2.1E+02 0.0061 12.3 1.4 10 33-42 5-14 (69) 8 >1l9v_A Rotavirus-NSP2; alpha/ 5.8 1.6E+02 0.0048 12.9 0.2 14 7-20 29-42 (148) 9 >2hx6_A Ribonuclease, GP61.9; 5.6 2.3E+02 0.0069 12.0 1.3 11 35-45 63-73 (153) 10 >2i3o_A Gamma-glutamyltransfer 5.2 2.5E+02 0.0074 11.9 2.0 13 21-33 12-24 (61) No 1 >>1i5p_A Pesticidial crystal protein CRY2AA; helical bundle, beta prism, lectin-like beta sandwich, jelly roll, toxin; 2.20A {Bacillus thuringiensis serovarkurstaki} (A:234-472) Probab=19.76 E-value=27 Score=17.08 Aligned_cols=15 Identities=40% Similarity=0.919 Sum_probs=11.5 Q ss_pred HHHHHHHHHHHHHHH Q ss_conf 999999999999998 Q 537021.9.peg.9 27 IESFALVILWSIFKK 41 (45) Q Consensus 27 iesfalvilwsifkk 41 (45) ..-|.+|-.||.||- T Consensus 17 LNv~d~VSiWSL~KY 31 (239) T 1i5p_A 17 LNVFEYVSIWSLFKY 31 (239) T ss_dssp HHTHHHHHHHTTTTC T ss_pred HHHHHHHHHHHHHHH T ss_conf 889888899998755 No 2 >>1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} (A:240-317) Probab=18.76 E-value=28 Score=16.95 Aligned_cols=12 Identities=58% Similarity=0.628 Sum_probs=9.2 Q ss_pred HCCHHHHHHHHH Q ss_conf 111001010599 Q 537021.9.peg.9 13 VDDKNQANARCA 24 (45) Q Consensus 13 vddknqanarca 24 (45) -.||+|||.|-. T Consensus 56 R~DK~qANdrlT 67 (78) T 1ckm_A 56 RSDKNQANDRLT 67 (78) T ss_dssp CTTCSSCCBHHH T ss_pred ECCCCCCCHHHH T ss_conf 389998635889 No 3 >>2cw1_A SN4M; lambda CRO fold, de novo protein; NMR {Synthetic} (A:) Probab=11.81 E-value=91 Score=14.24 Aligned_cols=22 Identities=55% Similarity=0.524 Sum_probs=15.0 Q ss_pred HHHHHHCCHHHHHHHHH-----HHHHH Q ss_conf 66664111001010599-----99999 Q 537021.9.peg.9 8 VLTKKVDDKNQANARCA-----DLIES 29 (45) Q Consensus 8 vltkkvddknqanarca-----dlies 29 (45) -|.|-|.||||.-|.-| .|||. T Consensus 6 dlkkfvedknqeyaaralglsqkliee 32 (65) T 2cw1_A 6 DLKKFVEDKNQEYAARALGLSQKLIEE 32 (65) T ss_dssp CHHHHHTTSCHHHHHHHSSSCHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHH T ss_conf 288887600288999984116999999 No 4 >>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} (A:107-144,A:238-284,A:335-398) Probab=9.02 E-value=1.1e+02 Score=13.81 Aligned_cols=20 Identities=35% Similarity=0.356 Sum_probs=14.3 Q ss_pred HHHHHHHH-----HHHHHHHHHHHH Q ss_conf 99999999-----999999999852 Q 537021.9.peg.9 24 ADLIESFA-----LVILWSIFKKLK 43 (45) Q Consensus 24 adliesfa-----lvilwsifkklk 43 (45) +||+|.|| -+|-|+++--.. T Consensus 31 ~~~~~~~a~dTt~~~I~~~i~~l~~ 55 (149) T 1lfk_A 31 ADLIAFVADDNISGMIGLGVLAMLR 55 (149) T ss_dssp EEHHHHTTSHHHHHHHHHHHHHHHH T ss_pred EEHHHHHHCHHHHHHHHHHHHHHHH T ss_conf 7619999906788999988988720 No 5 >>2wb6_A AFV1-102; archaeal virus, viral protein; 1.95A {Acidianus filamentous virus 1} (A:1-52,A:106-130) Probab=7.89 E-value=1.8e+02 Score=12.69 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=19.9 Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 4111001010599999999999999 Q 537021.9.peg.9 12 KVDDKNQANARCADLIESFALVILW 36 (45) Q Consensus 12 kvddknqanarcadliesfalvilw 36 (45) ..-|||.......|+..|.-|||-- T Consensus 29 givdknk~~ip~s~~ldsmflviek 53 (77) T 2wb6_A 29 GIVDKNKIVIPMSEFLDSMFLVIEK 53 (77) T ss_dssp SEECSSEEEEEHHHHHHHHHHHHHG T ss_pred CCCCCCCEECCHHHHHHHHHHHHHC T ss_conf 2135674024489988879999983 No 6 >>2gu0_A Nonstructural protein 2; NSP2, HIT motif, bristol, viral protein; 2.80A {Human rotavirus C} (A:1-148) Probab=7.42 E-value=1.4e+02 Score=13.28 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=9.4 Q ss_pred HHHHHHHHCCHHHHH Q ss_conf 236666411100101 Q 537021.9.peg.9 6 QAVLTKKVDDKNQAN 20 (45) Q Consensus 6 qavltkkvddknqan 20 (45) +..|+.|||.+++.+ T Consensus 28 kcML~AKVdK~~~~~ 42 (148) T 2gu0_A 28 QTMLCAKVEKDQRSN 42 (148) T ss_dssp HHHHHSCCCGGGTTS T ss_pred HHHHHHHCCHHHCCC T ss_conf 878763206422136 No 7 >>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomics; 1.60A {Pyrococcus horikoshii OT3} (A:83-151) Probab=6.60 E-value=2.1e+02 Score=12.33 Aligned_cols=10 Identities=40% Similarity=0.750 Sum_probs=7.1 Q ss_pred HHHHHHHHHH Q ss_conf 9999999985 Q 537021.9.peg.9 33 VILWSIFKKL 42 (45) Q Consensus 33 vilwsifkkl 42 (45) -||||-.||- T Consensus 5 wilw~elkkr 14 (69) T 1wr8_A 5 WILWNEIRKR 14 (69) T ss_dssp HHHHHHHHHH T ss_pred HHHHHHHHHH T ss_conf 9999877765 No 8 >>1l9v_A Rotavirus-NSP2; alpha/beta protein, HIT-like fold, octamer, two domain protein, viral protein; 2.60A {Simian 11 rotavirus} (A:1-148) Probab=5.75 E-value=1.6e+02 Score=12.88 Aligned_cols=14 Identities=50% Similarity=0.638 Sum_probs=8.3 Q ss_pred HHHHHHHCCHHHHH Q ss_conf 36666411100101 Q 537021.9.peg.9 7 AVLTKKVDDKNQAN 20 (45) Q Consensus 7 avltkkvddknqan 20 (45) ..|+-|||.++|.+ T Consensus 29 cML~AKVdK~~~~k 42 (148) T 1l9v_A 29 AMLTAKVDKKDMDK 42 (148) T ss_dssp HHTTCCCCGGGTTS T ss_pred HHHHHHCCHHHCCC T ss_conf 89875306433136 No 9 >>2hx6_A Ribonuclease, GP61.9; alpha/beta fold, hydrolase; NMR {Enterobacteria phage T4} (A:) Probab=5.64 E-value=2.3e+02 Score=12.02 Aligned_cols=11 Identities=36% Similarity=1.011 Sum_probs=8.2 Q ss_pred HHHHHHHHHCC Q ss_conf 99999985249 Q 537021.9.peg.9 35 LWSIFKKLKNH 45 (45) Q Consensus 35 lwsifkklknh 45 (45) ..+.|+|+++| T Consensus 63 v~~Lf~ki~~h 73 (153) T 2hx6_A 63 VFELFHKIKDH 73 (153) T ss_dssp HHHHHHHGGGG T ss_pred HHHHHHHHHHH T ss_conf 99999999874 No 10 >>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} (A:128-141,A:186-232) Probab=5.17 E-value=2.5e+02 Score=11.85 Aligned_cols=13 Identities=54% Similarity=0.695 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHHH Q ss_conf 0599999999999 Q 537021.9.peg.9 21 ARCADLIESFALV 33 (45) Q Consensus 21 arcadliesfalv 33 (45) |...||-|||.|. T Consensus 12 asapdlaesfrl~ 24 (61) T 2i3o_A 12 ASAPDLAESFRLX 24 (61) T ss_dssp HHHHHHHHHHHHH T ss_pred HCCHHHHHHHHHH T ss_conf 1147787999999 Done!