RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= 537021.9.peg.937_1 (48 letters) >3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprotein, oxidoreductase; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus} (A:) Length = 114 Score = 24.1 bits (52), Expect = 7.2 Identities = 5/13 (38%), Positives = 7/13 (53%) Query: 29 LFHSMTGYYIDNP 41 H++T Y NP Sbjct: 16 FNHAVTFGYPLNP 28 >2hj3_A Sulfhydryl oxidase ERV1P; four-helix bundle, flavin adenine dinucleotide, oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} (A:) Length = 125 Score = 24.1 bits (52), Expect = 7.3 Identities = 3/13 (23%), Positives = 6/13 (46%) Query: 29 LFHSMTGYYIDNP 41 H++ Y + P Sbjct: 20 FLHTLAAQYPEKP 32 >1oqc_A ALR, augmenter of liver regeneration; sulfhydryl oxidase, helix-turn- helix, oxidoreductase; HET: FAD; 1.80A {Rattus norvegicus} (A:) Length = 125 Score = 23.7 bits (51), Expect = 8.6 Identities = 5/13 (38%), Positives = 7/13 (53%) Query: 29 LFHSMTGYYIDNP 41 H++ YY D P Sbjct: 29 FLHTLAAYYPDMP 41 >3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V} (A:) Length = 106 Score = 23.7 bits (51), Expect = 10.0 Identities = 3/13 (23%), Positives = 5/13 (38%) Query: 29 LFHSMTGYYIDNP 41 H ++ D P Sbjct: 14 SLHLYAIFFSDAP 26 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.331 0.143 0.423 Gapped Lambda K H 0.267 0.0594 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 342,095 Number of extensions: 9119 Number of successful extensions: 41 Number of sequences better than 10.0: 1 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 5 Length of query: 48 Length of database: 4,956,049 Length adjustment: 19 Effective length of query: 29 Effective length of database: 4,313,754 Effective search space: 125098866 Effective search space used: 125098866 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 50 (23.3 bits)