Query         537021.9.peg.961_1
Match_columns 32
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Wed May 25 04:20:26 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_961.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2bcgg3 d.16.1.6 (G:302-399) G   7.5      31  0.0023   15.5  -0.6   24    6-29     18-45  (98)
  2 d1d5ta2 d.16.1.6 (A:292-388) G   7.3      32  0.0023   15.4  -0.6   23    6-28     17-43  (97)
  3 d2gnoa1 a.80.1.1 (A:209-306) g   3.5 1.6E+02   0.012   12.0   0.9   12    4-15     75-86  (98)
  4 d1khba1 c.91.1.1 (A:260-622) C   3.4 1.6E+02   0.011   12.0   0.7   18   12-29     83-100 (363)
  5 d1ef1a3 d.15.1.4 (A:4-87) Moes   3.3 1.8E+02   0.013   11.8   1.1   22    9-30     19-40  (84)
  6 d1h4ra3 d.15.1.4 (A:20-103) Me   2.8   2E+02   0.015   11.5   1.1   21    9-29     20-40  (84)
  7 d1fs1a1 a.158.1.1 (A:109-149)    2.8   2E+02   0.015   11.5   0.7   18    6-23     13-30  (41)
  8 d1gg3a3 d.15.1.4 (A:1-81) Eryt   2.7   2E+02   0.014   11.6   0.7   19   10-28     20-38  (81)
  9 d1kxpd1 a.126.1.1 (D:17-214) V   2.5 1.7E+02   0.013   11.9   0.1   18   11-28     70-87  (198)
 10 d1qhka_ d.100.1.2 (A:) N-termi   2.4 1.3E+02  0.0097   12.4  -0.5    9   22-30     10-18  (47)

No 1  
>d2bcgg3 d.16.1.6 (G:302-399) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.53  E-value=31  Score=15.51  Aligned_cols=24  Identities=25%  Similarity=0.425  Sum_probs=14.1

Q ss_pred             HHCCCCHHH----HHHHHHHCCCCHHHH
Q ss_conf             523672267----999997302222355
Q 537021.9.peg.9    6 IANMNTESS----LLLNQVCRKNTIFST   29 (32)
Q Consensus         6 ianmntess----lllnqvcrkntifst   29 (32)
                      |.|.+..+|    +--+||-|||.||-.
T Consensus        18 ipnt~~a~S~QIIiPq~Qv~Rk~DIYv~   45 (98)
T d2bcgg3          18 VPNTSNADSLQIIIPQSQLGRKSDIYVA   45 (98)
T ss_dssp             CTTSTTCSSEEEEECGGGTTCSSCEEEE
T ss_pred             CCCCCCCCEEEEEEEHHHHCCCCCEEEE
T ss_conf             5898988507899736781977688999


No 2  
>d1d5ta2 d.16.1.6 (A:292-388) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.35  E-value=32  Score=15.44  Aligned_cols=23  Identities=43%  Similarity=0.483  Sum_probs=13.7

Q ss_pred             HHCCCCHHHH----HHHHHHCCCCHHH
Q ss_conf             5236722679----9999730222235
Q 537021.9.peg.9    6 IANMNTESSL----LLNQVCRKNTIFS   28 (32)
Q Consensus         6 ianmntessl----llnqvcrkntifs   28 (32)
                      |.|.+..+|.    --+||-|||.||-
T Consensus        17 Ipnt~~a~S~QIIiPq~Qv~Rk~DIYv   43 (97)
T d1d5ta2          17 IKNTNDANSCQIIIPQNQVNRKSDIYV   43 (97)
T ss_dssp             CTTSTTCSSEEEEECGGGTTCSSCEEE
T ss_pred             CCCCCCCCCEEEEEEHHHHCCCCCEEE
T ss_conf             699898840789963178365798899


No 3  
>d2gnoa1 a.80.1.1 (A:209-306) gamma subunit {Thermotoga maritima [TaxId: 2336]}
Probab=3.48  E-value=1.6e+02  Score=11.99  Aligned_cols=12  Identities=50%  Similarity=0.645  Sum_probs=7.6

Q ss_pred             HHHHCCCCHHHH
Q ss_conf             765236722679
Q 537021.9.peg.9    4 EKIANMNTESSL   15 (32)
Q Consensus         4 ekianmntessl   15 (32)
                      -|+||.|+.-.|
T Consensus        75 vk~anln~~~tl   86 (98)
T d2gnoa1          75 VKIANLNNKLTL   86 (98)
T ss_dssp             CCGGGCCHHHHH
T ss_pred             HHHCCCCCHHHH
T ss_conf             986033540226


No 4  
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.40  E-value=1.6e+02  Score=12.05  Aligned_cols=18  Identities=28%  Similarity=0.348  Sum_probs=11.2

Q ss_pred             HHHHHHHHHHCCCCHHHH
Q ss_conf             267999997302222355
Q 537021.9.peg.9   12 ESSLLLNQVCRKNTIFST   29 (32)
Q Consensus        12 esslllnqvcrkntifst   29 (32)
                      ++.-..-..+++|+||+.
T Consensus        83 ~tnp~am~~l~~~~IFTN  100 (363)
T d1khba1          83 KTNPNAIKTIQKNTIFTN  100 (363)
T ss_dssp             TTCHHHHHHTTBSCEEES
T ss_pred             CCCHHHHHHHCCCCEEEE
T ss_conf             889999997536852443


No 5  
>d1ef1a3 d.15.1.4 (A:4-87) Moesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.26  E-value=1.8e+02  Score=11.78  Aligned_cols=22  Identities=27%  Similarity=0.454  Sum_probs=14.6

Q ss_pred             CCCHHHHHHHHHHCCCCHHHHH
Q ss_conf             6722679999973022223553
Q 537021.9.peg.9    9 MNTESSLLLNQVCRKNTIFSTW   30 (32)
Q Consensus         9 mntesslllnqvcrkntifstw   30 (32)
                      -.+...-|+++||+.-.|..+|
T Consensus        19 ~~a~G~~l~~~Vc~~l~L~E~d   40 (84)
T d1ef1a3          19 PNTTGKQLFDQVVKTIGLREVW   40 (84)
T ss_dssp             TTCBHHHHHHHHHHHHTCCCGG
T ss_pred             CCCHHHHHHHHHHHHCCCCCCC
T ss_conf             8991999999999885976356


No 6  
>d1h4ra3 d.15.1.4 (A:20-103) Merlin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.83  E-value=2e+02  Score=11.54  Aligned_cols=21  Identities=29%  Similarity=0.379  Sum_probs=14.1

Q ss_pred             CCCHHHHHHHHHHCCCCHHHH
Q ss_conf             672267999997302222355
Q 537021.9.peg.9    9 MNTESSLLLNQVCRKNTIFST   29 (32)
Q Consensus         9 mntesslllnqvcrkntifst   29 (32)
                      -.+...-|+++||+.-.|...
T Consensus        20 ~~a~G~~L~d~Vc~~L~L~E~   40 (84)
T d1h4ra3          20 MKWKGKDLFDLVCRTLGLRET   40 (84)
T ss_dssp             TTCBHHHHHHHHHHHHTCCCG
T ss_pred             CCCHHHHHHHHHHHHCCCCCC
T ss_conf             899189999999988597524


No 7  
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.76  E-value=2e+02  Score=11.53  Aligned_cols=18  Identities=17%  Similarity=0.399  Sum_probs=11.1

Q ss_pred             HHCCCCHHHHHHHHHHCC
Q ss_conf             523672267999997302
Q 537021.9.peg.9    6 IANMNTESSLLLNQVCRK   23 (32)
Q Consensus         6 ianmntesslllnqvcrk   23 (32)
                      ...++..+-.-+.+|||.
T Consensus        13 f~~L~~~dl~~~~~Vcr~   30 (41)
T d1fs1a1          13 FSCLCLPELLKVSGVCKR   30 (41)
T ss_dssp             HTTSCGGGHHHHHTTCHH
T ss_pred             HHCCCHHHHHHHHHHHHH
T ss_conf             986999999999999999


No 8  
>d1gg3a3 d.15.1.4 (A:1-81) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.75  E-value=2e+02  Score=11.56  Aligned_cols=19  Identities=21%  Similarity=0.497  Sum_probs=13.1

Q ss_pred             CCHHHHHHHHHHCCCCHHH
Q ss_conf             7226799999730222235
Q 537021.9.peg.9   10 NTESSLLLNQVCRKNTIFS   28 (32)
Q Consensus        10 ntesslllnqvcrkntifs   28 (32)
                      .+...-|+++||+.-.|..
T Consensus        20 ~~~G~~l~~~Vc~~l~l~E   38 (81)
T d1gg3a3          20 HAKGQDLLKRVCEHLNLLE   38 (81)
T ss_dssp             TCCHHHHHHHHHHHHTTCS
T ss_pred             CCCHHHHHHHHHHHCCCCC
T ss_conf             9919999999998869863


No 9  
>d1kxpd1 a.126.1.1 (D:17-214) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.49  E-value=1.7e+02  Score=11.86  Aligned_cols=18  Identities=33%  Similarity=0.549  Sum_probs=13.3

Q ss_pred             CHHHHHHHHHHCCCCHHH
Q ss_conf             226799999730222235
Q 537021.9.peg.9   11 TESSLLLNQVCRKNTIFS   28 (32)
Q Consensus        11 tesslllnqvcrkntifs   28 (32)
                      .+.+++++++|+....++
T Consensus        70 ~~~~~~~~~iC~~~~~~~   87 (198)
T d1kxpd1          70 TRTSALSAKSCESNSPFP   87 (198)
T ss_dssp             HHHHHHHHHTTSTTCSSC
T ss_pred             HHHHHHHHHHHCCCCCCC
T ss_conf             689999998736887788


No 10 
>d1qhka_ d.100.1.2 (A:) N-terminal domain of RNase HI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.42  E-value=1.3e+02  Score=12.40  Aligned_cols=9  Identities=44%  Similarity=1.184  Sum_probs=0.0

Q ss_pred             CCCCHHHHH
Q ss_conf             022223553
Q 537021.9.peg.9   22 RKNTIFSTW   30 (32)
Q Consensus        22 rkntifstw   30 (32)
                      |+..||++|
T Consensus        10 ~~~GIy~~W   18 (47)
T d1qhka_          10 RETGIYNTW   18 (47)
T ss_dssp             SSCEEEEEH
T ss_pred             CCCCCCCCH
T ss_conf             988833899


Done!