RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.97_1
         (55 letters)



>gnl|CDD|165485 PHA03222, PHA03222, single-stranded binding protein UL29;
           Provisional.
          Length = 337

 Score = 25.7 bits (56), Expect = 2.8
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 25  DIKAVVSVFFNILIDIWRFLNIG 47
           D+KA V +   +LID +R+ NIG
Sbjct: 293 DLKAFVRIGLALLIDDFRYENIG 315


>gnl|CDD|173589 PTZ00398, PTZ00398, phosphoenolpyruvate carboxylase; Provisional.
          Length = 974

 Score = 25.1 bits (55), Expect = 4.1
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 22 LKLDIKAVVSVFFNILIDIWR--FLNIGKNIKKL 53
          L LDIKA+  + F+++ D W      I  +I KL
Sbjct: 50 LDLDIKALEFLLFDLVKDHWPEDGFEIIFDILKL 83


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.333    0.147    0.450 

Gapped
Lambda     K      H
   0.267   0.0600    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 875,331
Number of extensions: 38004
Number of successful extensions: 114
Number of sequences better than 10.0: 1
Number of HSP's gapped: 114
Number of HSP's successfully gapped: 11
Length of query: 55
Length of database: 5,994,473
Length adjustment: 27
Effective length of query: 28
Effective length of database: 5,411,057
Effective search space: 151509596
Effective search space used: 151509596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 50 (23.3 bits)