# $CVSHeader: pal8e/etc/pssdconf,v 1.23 2005/02/15 01:10:24 indraneel Rel $

[Input]
## pdb input files are here
pdbdir = ../../dat/testpdb/
listfiledir = ../../dat/lists/
listfile = unq_fold_B_AB_chains
#filename_prefilter = pdb
filename_postfilter = .pdb
# for weekly updates
PDBstatusdir = /mnt/e13/data/pdb/data/status/
# weekly update info file
WeeklyInfoFile = /mnt/e13/data/pssdinfo

[Output]
## outputs go here
compression = 0
secfilename_posttag = .ssd
secoutdir = ../../pssd-out/0/
#ps files required?
psfilereqd = 1
psoutdir = ../../pssd-out/0/
#insight log files?
insfilereqd = 1
insoutdir = ../../pssd-out/0/
#pymol scripts required?
pmlfilereqd = 1
pmloutdir = ../../pssd-out/0/
# overwrite files?
overwrite = 1

[Debug]
logfile = pssdlog
## debug checkpoints here
dbgdir = ../../pssd-dbg/0/
#dbgitems = critical info element peptides quad quadtrace debug compare none all
dbgitems = critical trace info quad peptides element compare

[Data]
## cutoffs and other data
datdir = ../dat/

[Display]
## relative path from display program to pdbdir
inspdbdir = wrk/dat/testpdb/
pmlpdbdir = ../../../wrk/dat/testpdb/

[Compare]
#prerun files
use_dssp = 0
dsspdir = ../../pssd-compare/dsspout/
dssptail = .dssp

use_stride = 0
stridedir = ../../pssd-compare/strideout/
stridetail = .str

use_sstruc = 0
sstrucdir = ../../pssd-compare/sstrucout/
sstructail = .sst

use_pross = 0
prossdir = ../../pssd-compare/prossout/
prosstail = .pross

use_molauto = 0
molautodir = ../../pssd-compare/molautout/
molautotail = .mauto

[Process]
children = 3
#use_pvm = 1
