No 1: Query=mol1A Sbjct=mol2A Z-score=5.5

DSSP  leeellleeeeeeeeEEELL.........lLEEE.EEEEEE.EELLlLLEEEEEEEEEEE
Query nienigaevvkrtedTSSDK.........wGVTQ.NIQFDF.VKDKkYNKDALILKMQGF   49
ident                                             |               
Sbjct .............glDNELSlvdgqdrtltVQQWdTFLNGVfPLDR.NRLTREWFHSGRA   46
DSSP  .............leEEEEEeellllleeeEEEEeEEEEEElLLLL.LLLLEEEEEEEEE


DSSP  EElLLEEEelllllleeeEEEEeEEEEEEEELLLLeeeeeeelllllllleeeeeeeeel
Query INsKTTYYnykntdhikaMRWPfQYNIGLKTNDPNvdlinylpknkidsvnvsqtlgyni  109
ident                            |     |                          
Sbjct KY.IVAGP.......gadEFEG.TLELGYQIGFPW..slgvginfsyttpniliddgdit   95
DSSP  EE.EEELL.......lhhHLEE.EEEEEEEEELLE..eeeeeeeeelllllleellllll


DSSP  lleeelllleeeeeeeellleeeeeeeelLLEEE.EEEEEleellleellllllllllll
Query ggnfnssfnysktisynqqnyisevehqnSKSVQ.WGIKAnsfitkmsghdpnlfvgykp  168
ident                                 |                           
Sbjct rppfglnsvitpnlfpgvsisadlgngpgIQEVAtFSVDV....................  135
DSSP  lllllllleelllllleeeeeeeeeelllLEEEEeEEEEE....................


DSSP  llllhhhhlllhhhllhhHHLEELLEE.EEEEEEElllLLEEEEEEEEEEEEEeeeeeee
Query ysqnprdyfvpdnelpplVHSGFNPSF.IATVSHEkgsGDTSEFEITYGRNMDvthatrr  227
ident                      |                                      
Sbjct .................sGAEGGVAVSnAHGTVTG..aAGGVLLRPFARLIAS.......  169
DSSP  .................eLLEEEEEEEeEEEEELL..eELLLEEEEEEEEEEL.......


DSSP  llleeeeeeeeEEEEeEEEEE.EEEEEllllleeeeeel
Query tnsylegsrihNAFVnRNYTV.KYEVNwktheikvkghn  265
ident                           |            
Sbjct ...........TGDS.VTTYGePWNMN............  184
DSSP  ...........LLLE.EEEELlLEELL............


No 2: Query=mol1A Sbjct=mol2A Z-score=2.3

DSSP  leeelllEEEEEEEEEEElllLEEEEEEEEEEEL.............lllLEEEEEEEEE
Query nienigaEVVKRTEDTSSdkwGVTQNIQFDFVKD.............kkyNKDALILKMQ   47
ident                                                             
Sbjct .......GLDNELSLVDG...QDRTLTVQQWDTFlngvfpldrnrltrewFHSGRAKYIV   50
DSSP  .......LEEEEEEEELL...LLLEEEEEEEEEEeeeellllllllleeeEEEEEEEEEE


DSSP  EEeellleeeelllllleeeeeeeeeeeeeeeelllleeeeeeelllllllleeeeeeee
Query GFinskttyynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgy  107
ident                                                             
Sbjct AG..........................................................   52
DSSP  EL..........................................................


DSSP  ellleeelllleeeeeeeellleeeeeeeellleeeeeeeeleellleelllllllllll
Query niggnfnssfnysktisynqqnyisevehqnsksvqwgikansfitkmsghdpnlfvgyk  167
ident                                                             
Sbjct ............................................................   52
DSSP  ............................................................


DSSP  lllllhhhhlllhhhllhhhhlEELL..................................
Query pysqnprdyfvpdnelpplvhsGFNP..................................  193
ident                                                             
Sbjct ......................PGADefegtlelgyqigfpwslgvginfsyttpnilid   90
DSSP  ......................LLHHhleeeeeeeeeeelleeeeeeeeeelllllleel


DSSP  ...............................................EEEEEEEEELL..
Query ...............................................SFIATVSHEKG..  204
ident                                                             
Sbjct dgditrppfglnsvitpnlfpgvsisadlgngpgiqevatfsvdvsgAEGGVAVSNAHgt  150
DSSP  llllllllllllleelllllleeeeeeeeeelllleeeeeeeeeeelLEEEEEEEEEEee


DSSP  ........lLLEEeEEEEEeeeeeeeeeeeellleeeeeeeeeeeeeeEEEEEEEEELLl
Query ........sGDTSeFEITYgrnmdvthatrrtnsylegsrihnafvnrNYTVKYEVNWKt  256
ident                 |                                           
Sbjct vtgaaggvlLRPFaRLIAS.............................TGDSVTTYGEP.  180
DSSP  elleellleEEEEeEEEEL.............................LLLEEEEELLL.


DSSP  lleeeeeel
Query heikvkghn  265
ident          
Sbjct .....wnmn  184
DSSP  .....eell


No 3: Query=mol1A Sbjct=mol2A Z-score=2.1

DSSP  .....LEEEL..LLEEEEEEE.EEEELL..........LLEEEEEEEEEEELLL.LLEE.
Query .....NIENI..GAEVVKRTE.DTSSDK..........WGVTQNIQFDFVKDKK.YNKD.   40
ident                                                  |          
Sbjct gldneLSLVDgqDRTLTVQQWdTFLNGVfpldrnrltrEWFHSGRAKYIVAGPGaDEFEg   60
DSSP  leeeeEEEELllLLEEEEEEEeEEEEEEllllllllleEEEEEEEEEEEEELLLhHHLEe


DSSP  ............................................................
Query ............................................................   40
ident                                                             
Sbjct tlelgyqigfpwslgvginfsyttpniliddgditrppfglnsvitpnlfpgvsisadlg  120
DSSP  eeeeeeeeelleeeeeeeeeelllllleelllllllllllllleelllllleeeeeeeee


DSSP  .................EEEEEEEE.EEELlleeeelllllleeeeeeeeeeeeeeeell
Query .................ALILKMQG.FINSkttyynykntdhikamrwpfqyniglktnd   82
ident                  |                                          
Sbjct ngpgiqevatfsvdvsgAEGGVAVSnAHGT..............................  150
DSSP  elllleeeeeeeeeeelLEEEEEEEeEEEE..............................


DSSP  lleeeeeeelllllllleeeeeeeeellleeelllleeeeeeeellleeeeeeeelllee
Query pnvdlinylpknkidsvnvsqtlgyniggnfnssfnysktisynqqnyisevehqnsksv  142
ident                                                             
Sbjct ............................................................  150
DSSP  ............................................................


DSSP  eeeeeeleellleellllllllllllllllhhhhlllhhhllhhhhleelleeeeeeeee
Query qwgikansfitkmsghdpnlfvgykpysqnprdyfvpdnelpplvhsgfnpsfiatvshe  202
ident                                                             
Sbjct ............................................................  150
DSSP  ............................................................


DSSP  llllleeeeeeeeeEEeeeeeeeeellleeeeeeeeeeeEE......eeeeeeeeeellL
Query kgsgdtsefeitygRNmdvthatrrtnsylegsrihnafVN......rnytvkyevnwkT  256
ident                                                             
Sbjct ..............VT.......................GAaggvllrpfarliastgdS  173
DSSP  ..............EL.......................LEellleeeeeeeeeellllE


DSSP  LLEEEEEEL..
Query HEIKVKGHN..  265
ident         |  
Sbjct VTTYGEPWNmn  184
DSSP  EEEELLLEEll