HEADER OXIDOREDUCTASE 11-SEP-08 3EH5 TITLE Structure of the reduced form of cytochrome ba3 oxidase from Thermus TITLE 2 thermophilus COMPND MOL_ID: 3; COMPND 2 MOLECULE: Cytochrome c oxidase polypeptide 2A; COMPND 3 CHAIN: C; COMPND 4 EC: 1.9.3.1; COMPND 5 FRAGMENT: UNP residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.80 ANGSTORMS DBREF 3EH5 C 2 34 UNP P82543 COXA_THET8 2 34 SEQRES 1 C 33 GLU GLU LYS PRO LYS GLY ALA LEU ALA VAL ILE LEU VAL SEQRES 2 C 33 LEU THR LEU THR ILE LEU VAL PHE TRP LEU GLY VAL TYR SEQRES 3 C 33 ALA VAL PHE PHE ALA ARG GLY ATOM 1 N GLU C 1 -16.453 7.578 -34.274 1.00142.58 ATOM 2 CA GLU C 1 -17.365 8.090 -35.347 1.00142.53 ATOM 3 C GLU C 1 -17.122 9.594 -35.598 1.00141.36 ATOM 4 O GLU C 1 -16.026 9.986 -36.025 1.00141.34 ATOM 5 CB GLU C 1 -18.838 7.825 -34.986 1.00143.15 ATOM 6 CG GLU C 1 -19.121 6.426 -34.429 1.00144.88 ATOM 7 CD GLU C 1 -20.352 6.354 -33.509 1.00146.36 ATOM 8 OE1 GLU C 1 -21.126 7.338 -33.456 1.00147.47 ATOM 9 OE2 GLU C 1 -20.547 5.306 -32.840 1.00145.84 ATOM 10 N GLU C 2 -18.143 10.418 -35.329 1.00139.46 ATOM 11 CA GLU C 2 -18.056 11.888 -35.467 1.00137.21 ATOM 12 C GLU C 2 -18.674 12.657 -34.258 1.00133.42 ATOM 13 O GLU C 2 -18.015 12.869 -33.222 1.00133.09 ATOM 14 CB GLU C 2 -18.654 12.344 -36.832 1.00138.25 ATOM 15 CG GLU C 2 -18.835 13.881 -37.051 1.00141.04 ATOM 16 CD GLU C 2 -17.519 14.677 -37.047 1.00143.39 ATOM 17 OE1 GLU C 2 -16.869 14.757 -38.125 1.00145.86 ATOM 18 OE2 GLU C 2 -17.154 15.238 -35.979 1.00141.31 ATOM 19 N LYS C 3 -19.951 13.019 -34.406 1.00128.57 ATOM 20 CA LYS C 3 -20.660 13.985 -33.572 1.00122.95 ATOM 21 C LYS C 3 -21.235 13.352 -32.295 1.00117.81 ATOM 22 O LYS C 3 -21.941 12.334 -32.374 1.00117.73 ATOM 23 CB LYS C 3 -21.785 14.601 -34.419 1.00123.17 ATOM 24 CG LYS C 3 -22.315 15.907 -33.885 1.00127.96 ATOM 25 CD LYS C 3 -23.140 16.677 -34.914 1.00129.27 ATOM 26 CE LYS C 3 -23.426 18.101 -34.399 1.00130.18 ATOM 27 NZ LYS C 3 -24.254 18.940 -35.337 1.00131.08 ATOM 28 N PRO C 4 -20.962 13.964 -31.114 1.00112.62 ATOM 29 CA PRO C 4 -21.538 13.448 -29.863 1.00107.31 ATOM 30 C PRO C 4 -22.928 14.028 -29.752 1.00103.11 ATOM 31 O PRO C 4 -23.167 14.891 -28.904 1.00102.86 ATOM 32 CB PRO C 4 -20.649 14.062 -28.795 1.00107.15 ATOM 33 CG PRO C 4 -20.285 15.409 -29.369 1.00109.53 ATOM 34 CD PRO C 4 -20.159 15.185 -30.880 1.00111.93 ATOM 35 N LYS C 5 -23.825 13.589 -30.634 1.00 98.11 ATOM 36 CA LYS C 5 -25.123 14.228 -30.761 1.00 94.23 ATOM 37 C LYS C 5 -26.114 13.836 -29.653 1.00 90.01 ATOM 38 O LYS C 5 -27.039 14.587 -29.352 1.00 88.98 ATOM 39 CB LYS C 5 -25.719 14.030 -32.165 1.00 95.28 ATOM 40 CG LYS C 5 -25.911 12.579 -32.609 1.00100.76 ATOM 41 CD LYS C 5 -27.002 12.472 -33.690 1.00107.49 ATOM 42 CE LYS C 5 -26.554 12.997 -35.089 1.00109.54 ATOM 43 NZ LYS C 5 -27.678 13.612 -35.885 1.00109.77 ATOM 44 N GLY C 6 -25.928 12.667 -29.050 1.00 86.11 ATOM 45 CA GLY C 6 -26.729 12.277 -27.907 1.00 83.74 ATOM 46 C GLY C 6 -26.568 13.324 -26.828 1.00 83.50 ATOM 47 O GLY C 6 -27.564 13.831 -26.318 1.00 82.09 ATOM 48 N ALA C 7 -25.308 13.671 -26.512 1.00 84.17 ATOM 49 CA ALA C 7 -24.953 14.714 -25.515 1.00 84.84 ATOM 50 C ALA C 7 -25.498 16.126 -25.836 1.00 86.07 ATOM 51 O ALA C 7 -25.837 16.896 -24.919 1.00 86.24 ATOM 52 CB ALA C 7 -23.419 14.750 -25.258 1.00 82.73 ATOM 53 N LEU C 8 -25.571 16.464 -27.122 1.00 86.82 ATOM 54 CA LEU C 8 -26.228 17.707 -27.557 1.00 88.46 ATOM 55 C LEU C 8 -27.751 17.735 -27.305 1.00 87.80 ATOM 56 O LEU C 8 -28.276 18.718 -26.849 1.00 89.60 ATOM 57 CB LEU C 8 -25.918 17.989 -29.029 1.00 88.71 ATOM 58 CG LEU C 8 -24.511 18.529 -29.257 1.00 90.95 ATOM 59 CD1 LEU C 8 -23.992 18.070 -30.612 1.00 93.71 ATOM 60 CD2 LEU C 8 -24.492 20.050 -29.157 1.00 92.33 ATOM 61 N ALA C 9 -28.458 16.657 -27.596 1.00 86.44 ATOM 62 CA ALA C 9 -29.857 16.583 -27.271 1.00 85.58 ATOM 63 C ALA C 9 -30.072 16.605 -25.756 1.00 86.01 ATOM 64 O ALA C 9 -31.128 17.029 -25.290 1.00 87.74 ATOM 65 CB ALA C 9 -30.455 15.349 -27.877 1.00 86.26 ATOM 66 N VAL C 10 -29.077 16.160 -24.985 1.00 85.16 ATOM 67 CA VAL C 10 -29.142 16.268 -23.529 1.00 82.47 ATOM 68 C VAL C 10 -29.065 17.720 -23.177 1.00 83.58 ATOM 69 O VAL C 10 -29.977 18.218 -22.503 1.00 86.05 ATOM 70 CB VAL C 10 -28.059 15.468 -22.789 1.00 81.34 ATOM 71 CG1 VAL C 10 -28.071 15.781 -21.294 1.00 82.45 ATOM 72 CG2 VAL C 10 -28.301 13.999 -22.949 1.00 82.31 ATOM 73 N ILE C 11 -28.026 18.424 -23.646 1.00 82.58 ATOM 74 CA ILE C 11 -27.827 19.827 -23.219 1.00 81.50 ATOM 75 C ILE C 11 -28.877 20.726 -23.835 1.00 81.21 ATOM 76 O ILE C 11 -29.109 21.841 -23.386 1.00 83.95 ATOM 77 CB ILE C 11 -26.378 20.401 -23.408 1.00 81.62 ATOM 78 CG1 ILE C 11 -25.969 20.505 -24.884 1.00 81.98 ATOM 79 CG2 ILE C 11 -25.356 19.633 -22.549 1.00 81.33 ATOM 80 CD1 ILE C 11 -24.503 20.833 -25.067 1.00 78.72 ATOM 81 N LEU C 12 -29.564 20.204 -24.828 1.00 79.31 ATOM 82 CA LEU C 12 -30.678 20.910 -25.420 1.00 79.09 ATOM 83 C LEU C 12 -31.935 20.894 -24.516 1.00 78.10 ATOM 84 O LEU C 12 -32.601 21.932 -24.316 1.00 77.71 ATOM 85 CB LEU C 12 -30.982 20.307 -26.802 1.00 78.88 ATOM 86 CG LEU C 12 -31.714 21.136 -27.860 1.00 79.63 ATOM 87 CD1 LEU C 12 -33.140 20.812 -27.764 1.00 82.71 ATOM 88 CD2 LEU C 12 -31.490 22.678 -27.751 1.00 81.15 ATOM 89 N VAL C 13 -32.276 19.708 -24.001 1.00 77.38 ATOM 90 CA VAL C 13 -33.371 19.571 -23.033 1.00 76.19 ATOM 91 C VAL C 13 -33.070 20.462 -21.802 1.00 76.99 ATOM 92 O VAL C 13 -33.948 21.110 -21.238 1.00 77.49 ATOM 93 CB VAL C 13 -33.600 18.075 -22.684 1.00 75.06 ATOM 94 CG1 VAL C 13 -34.788 17.896 -21.700 1.00 68.96 ATOM 95 CG2 VAL C 13 -33.826 17.284 -23.991 1.00 69.54 ATOM 96 N LEU C 14 -31.792 20.526 -21.439 1.00 77.17 ATOM 97 CA LEU C 14 -31.349 21.246 -20.276 1.00 74.95 ATOM 98 C LEU C 14 -31.541 22.729 -20.487 1.00 77.00 ATOM 99 O LEU C 14 -32.074 23.411 -19.623 1.00 80.30 ATOM 100 CB LEU C 14 -29.883 20.900 -19.991 1.00 72.29 ATOM 101 CG LEU C 14 -29.302 21.766 -18.868 1.00 70.31 ATOM 102 CD1 LEU C 14 -30.119 21.735 -17.515 1.00 67.38 ATOM 103 CD2 LEU C 14 -27.842 21.412 -18.707 1.00 67.29 ATOM 104 N THR C 15 -31.093 23.236 -21.628 1.00 77.06 ATOM 105 CA THR C 15 -31.375 24.622 -22.008 1.00 76.99 ATOM 106 C THR C 15 -32.880 24.969 -22.001 1.00 76.83 ATOM 107 O THR C 15 -33.309 25.942 -21.371 1.00 76.43 ATOM 108 CB THR C 15 -30.742 24.972 -23.398 1.00 77.03 ATOM 109 OG1 THR C 15 -29.318 24.773 -23.330 1.00 77.49 ATOM 110 CG2 THR C 15 -31.056 26.439 -23.776 1.00 73.48 ATOM 111 N LEU C 16 -33.686 24.190 -22.712 1.00 76.63 ATOM 112 CA LEU C 16 -35.120 24.444 -22.651 1.00 77.88 ATOM 113 C LEU C 16 -35.739 24.464 -21.216 1.00 75.80 ATOM 114 O LEU C 16 -36.511 25.360 -20.897 1.00 75.05 ATOM 115 CB LEU C 16 -35.892 23.526 -23.612 1.00 78.05 ATOM 116 CG LEU C 16 -35.449 23.602 -25.070 1.00 79.42 ATOM 117 CD1 LEU C 16 -36.135 22.493 -25.927 1.00 78.29 ATOM 118 CD2 LEU C 16 -35.661 25.003 -25.651 1.00 76.74 ATOM 119 N THR C 17 -35.409 23.489 -20.377 1.00 74.42 ATOM 120 CA THR C 17 -35.954 23.477 -19.025 1.00 76.21 ATOM 121 C THR C 17 -35.599 24.799 -18.310 1.00 77.35 ATOM 122 O THR C 17 -36.507 25.511 -17.764 1.00 77.04 ATOM 123 CB THR C 17 -35.477 22.262 -18.212 1.00 74.67 ATOM 124 OG1 THR C 17 -35.484 21.128 -19.077 1.00 74.93 ATOM 125 CG2 THR C 17 -36.401 21.985 -17.070 1.00 71.18 ATOM 126 N ILE C 18 -34.296 25.113 -18.358 1.00 75.16 ATOM 127 CA ILE C 18 -33.773 26.364 -17.870 1.00 74.83 ATOM 128 C ILE C 18 -34.585 27.550 -18.380 1.00 78.57 ATOM 129 O ILE C 18 -34.936 28.401 -17.547 1.00 83.15 ATOM 130 CB ILE C 18 -32.302 26.554 -18.199 1.00 74.21 ATOM 131 CG1 ILE C 18 -31.438 25.431 -17.576 1.00 70.20 ATOM 132 CG2 ILE C 18 -31.837 27.944 -17.772 1.00 74.35 ATOM 133 CD1 ILE C 18 -29.990 25.851 -17.264 1.00 64.15 ATOM 134 N LEU C 19 -34.914 27.630 -19.691 1.00 78.43 ATOM 135 CA LEU C 19 -35.761 28.751 -20.215 1.00 76.06 ATOM 136 C LEU C 19 -37.241 28.668 -19.838 1.00 75.59 ATOM 137 O LEU C 19 -37.857 29.674 -19.540 1.00 76.93 ATOM 138 CB LEU C 19 -35.602 29.000 -21.715 1.00 75.97 ATOM 139 CG LEU C 19 -34.208 29.354 -22.290 1.00 79.88 ATOM 140 CD1 LEU C 19 -34.124 29.181 -23.858 1.00 75.53 ATOM 141 CD2 LEU C 19 -33.680 30.731 -21.841 1.00 74.51 ATOM 142 N VAL C 20 -37.835 27.491 -19.782 1.00 76.01 ATOM 143 CA VAL C 20 -39.233 27.484 -19.359 1.00 75.39 ATOM 144 C VAL C 20 -39.365 27.970 -17.921 1.00 74.10 ATOM 145 O VAL C 20 -40.216 28.786 -17.632 1.00 73.46 ATOM 146 CB VAL C 20 -39.950 26.146 -19.609 1.00 77.14 ATOM 147 CG1 VAL C 20 -41.235 26.013 -18.722 1.00 74.27 ATOM 148 CG2 VAL C 20 -40.261 25.987 -21.128 1.00 73.52 ATOM 149 N PHE C 21 -38.473 27.510 -17.053 1.00 73.92 ATOM 150 CA PHE C 21 -38.475 27.876 -15.647 1.00 72.88 ATOM 151 C PHE C 21 -38.250 29.400 -15.473 1.00 76.11 ATOM 152 O PHE C 21 -39.053 30.062 -14.782 1.00 75.38 ATOM 153 CB PHE C 21 -37.374 27.090 -14.897 1.00 73.21 ATOM 154 CG PHE C 21 -37.829 25.749 -14.277 1.00 72.95 ATOM 155 CD1 PHE C 21 -38.178 24.648 -15.074 1.00 69.22 ATOM 156 CD2 PHE C 21 -37.819 25.569 -12.894 1.00 71.83 ATOM 157 CE1 PHE C 21 -38.564 23.384 -14.506 1.00 67.04 ATOM 158 CE2 PHE C 21 -38.211 24.297 -12.324 1.00 75.55 ATOM 159 CZ PHE C 21 -38.585 23.207 -13.169 1.00 71.48 ATOM 160 N TRP C 22 -37.168 29.953 -16.083 1.00 78.25 ATOM 161 CA TRP C 22 -36.769 31.369 -15.901 1.00 77.65 ATOM 162 C TRP C 22 -37.807 32.322 -16.575 1.00 79.37 ATOM 163 O TRP C 22 -38.286 33.325 -15.977 1.00 79.26 ATOM 164 CB TRP C 22 -35.353 31.584 -16.435 1.00 77.06 ATOM 165 CG TRP C 22 -34.543 32.675 -15.705 1.00 75.88 ATOM 166 CD1 TRP C 22 -33.607 32.500 -14.695 1.00 78.17 ATOM 167 CD2 TRP C 22 -34.571 34.083 -15.968 1.00 77.75 ATOM 168 NE1 TRP C 22 -33.077 33.722 -14.303 1.00 76.39 ATOM 169 CE2 TRP C 22 -33.655 34.705 -15.063 1.00 75.86 ATOM 170 CE3 TRP C 22 -35.288 34.889 -16.884 1.00 78.90 ATOM 171 CZ2 TRP C 22 -33.462 36.064 -15.035 1.00 73.86 ATOM 172 CZ3 TRP C 22 -35.094 36.237 -16.852 1.00 75.64 ATOM 173 CH2 TRP C 22 -34.188 36.816 -15.926 1.00 77.92 ATOM 174 N LEU C 23 -38.194 31.994 -17.801 1.00 78.45 ATOM 175 CA LEU C 23 -39.253 32.785 -18.439 1.00 77.80 ATOM 176 C LEU C 23 -40.597 32.667 -17.682 1.00 74.75 ATOM 177 O LEU C 23 -41.254 33.678 -17.499 1.00 75.64 ATOM 178 CB LEU C 23 -39.381 32.507 -19.965 1.00 77.29 ATOM 179 CG LEU C 23 -38.562 33.380 -20.946 1.00 79.99 ATOM 180 CD1 LEU C 23 -37.380 34.147 -20.296 1.00 82.21 ATOM 181 CD2 LEU C 23 -38.089 32.581 -22.176 1.00 77.88 ATOM 182 N GLY C 24 -40.991 31.468 -17.234 1.00 69.15 ATOM 183 CA GLY C 24 -42.212 31.321 -16.456 1.00 64.53 ATOM 184 C GLY C 24 -42.124 32.123 -15.164 1.00 66.95 ATOM 185 O GLY C 24 -42.986 32.945 -14.825 1.00 66.30 ATOM 186 N VAL C 25 -41.046 31.961 -14.429 1.00 68.61 ATOM 187 CA VAL C 25 -40.967 32.761 -13.249 1.00 71.92 ATOM 188 C VAL C 25 -40.837 34.281 -13.524 1.00 74.95 ATOM 189 O VAL C 25 -41.276 35.095 -12.688 1.00 77.61 ATOM 190 CB VAL C 25 -40.011 32.126 -12.203 1.00 71.91 ATOM 191 CG1 VAL C 25 -39.826 33.004 -10.983 1.00 71.51 ATOM 192 CG2 VAL C 25 -40.616 30.761 -11.767 1.00 72.75 ATOM 193 N TYR C 26 -40.279 34.694 -14.664 1.00 75.72 ATOM 194 CA TYR C 26 -40.161 36.146 -14.945 1.00 76.46 ATOM 195 C TYR C 26 -41.586 36.725 -15.076 1.00 76.32 ATOM 196 O TYR C 26 -41.937 37.787 -14.473 1.00 77.00 ATOM 197 CB TYR C 26 -39.355 36.374 -16.237 1.00 77.35 ATOM 198 CG TYR C 26 -38.665 37.723 -16.410 1.00 77.95 ATOM 199 CD1 TYR C 26 -37.707 38.193 -15.476 1.00 79.32 ATOM 200 CD2 TYR C 26 -38.917 38.500 -17.535 1.00 77.93 ATOM 201 CE1 TYR C 26 -37.055 39.430 -15.651 1.00 77.85 ATOM 202 CE2 TYR C 26 -38.270 39.735 -17.730 1.00 80.60 ATOM 203 CZ TYR C 26 -37.339 40.199 -16.802 1.00 80.84 ATOM 204 OH TYR C 26 -36.736 41.439 -17.038 1.00 76.81 ATOM 205 N ALA C 27 -42.409 35.996 -15.840 1.00 74.07 ATOM 206 CA ALA C 27 -43.772 36.400 -16.124 1.00 72.53 ATOM 207 C ALA C 27 -44.581 36.483 -14.827 1.00 74.13 ATOM 208 O ALA C 27 -45.277 37.464 -14.601 1.00 76.57 ATOM 209 CB ALA C 27 -44.428 35.467 -17.177 1.00 69.42 ATOM 210 N VAL C 28 -44.467 35.489 -13.956 1.00 73.85 ATOM 211 CA VAL C 28 -45.148 35.570 -12.678 1.00 73.64 ATOM 212 C VAL C 28 -44.707 36.831 -11.946 1.00 75.18 ATOM 213 O VAL C 28 -45.566 37.578 -11.453 1.00 77.14 ATOM 214 CB VAL C 28 -44.911 34.315 -11.776 1.00 73.05 ATOM 215 CG1 VAL C 28 -45.552 34.497 -10.466 1.00 73.03 ATOM 216 CG2 VAL C 28 -45.500 33.072 -12.396 1.00 72.18 ATOM 217 N PHE C 29 -43.390 37.093 -11.896 1.00 74.85 ATOM 218 CA PHE C 29 -42.837 38.247 -11.132 1.00 74.61 ATOM 219 C PHE C 29 -43.497 39.532 -11.571 1.00 76.43 ATOM 220 O PHE C 29 -43.955 40.316 -10.699 1.00 75.79 ATOM 221 CB PHE C 29 -41.310 38.361 -11.280 1.00 72.70 ATOM 222 CG PHE C 29 -40.695 39.618 -10.685 1.00 68.22 ATOM 223 CD1 PHE C 29 -40.255 39.659 -9.354 1.00 70.93 ATOM 224 CD2 PHE C 29 -40.482 40.742 -11.470 1.00 67.95 ATOM 225 CE1 PHE C 29 -39.660 40.854 -8.783 1.00 68.78 ATOM 226 CE2 PHE C 29 -39.863 41.934 -10.915 1.00 70.97 ATOM 227 CZ PHE C 29 -39.459 41.978 -9.578 1.00 66.78 ATOM 228 N PHE C 30 -43.548 39.744 -12.902 1.00 76.19 ATOM 229 CA PHE C 30 -44.230 40.939 -13.441 1.00 76.23 ATOM 230 C PHE C 30 -45.661 40.956 -13.098 1.00 76.06 ATOM 231 O PHE C 30 -46.105 41.935 -12.530 1.00 78.89 ATOM 232 CB PHE C 30 -43.990 41.223 -14.939 1.00 78.23 ATOM 233 CG PHE C 30 -42.769 42.065 -15.164 1.00 79.96 ATOM 234 CD1 PHE C 30 -42.793 43.422 -14.875 1.00 79.14 ATOM 235 CD2 PHE C 30 -41.553 41.475 -15.519 1.00 81.69 ATOM 236 CE1 PHE C 30 -41.646 44.204 -14.991 1.00 79.28 ATOM 237 CE2 PHE C 30 -40.402 42.253 -15.635 1.00 81.75 ATOM 238 CZ PHE C 30 -40.465 43.626 -15.373 1.00 78.15 ATOM 239 N ALA C 31 -46.387 39.872 -13.365 1.00 75.31 ATOM 240 CA ALA C 31 -47.810 39.833 -13.020 1.00 73.43 ATOM 241 C ALA C 31 -48.128 40.162 -11.545 1.00 75.38 ATOM 242 O ALA C 31 -49.260 40.475 -11.254 1.00 79.34 ATOM 243 CB ALA C 31 -48.425 38.548 -13.438 1.00 70.81 ATOM 244 N ARG C 32 -47.156 40.164 -10.634 1.00 75.00 ATOM 245 CA ARG C 32 -47.417 40.449 -9.213 1.00 77.24 ATOM 246 C ARG C 32 -46.812 41.761 -8.792 1.00 79.67 ATOM 247 O ARG C 32 -46.669 42.023 -7.561 1.00 78.59 ATOM 248 CB ARG C 32 -46.753 39.408 -8.315 1.00 78.55 ATOM 249 CG ARG C 32 -47.582 38.195 -7.984 1.00 83.35 ATOM 250 CD ARG C 32 -46.713 36.972 -7.818 1.00 81.75 ATOM 251 NE ARG C 32 -47.517 35.772 -7.995 1.00 85.15 ATOM 252 CZ ARG C 32 -47.222 34.596 -7.448 1.00 87.59 ATOM 253 NH1 ARG C 32 -48.026 33.562 -7.643 1.00 90.01 ATOM 254 NH2 ARG C 32 -46.128 34.442 -6.706 1.00 86.69 ATOM 255 N GLY C 33 -46.411 42.548 -9.797 1.00 80.97 ATOM 256 CA GLY C 33 -45.558 43.729 -9.606 1.00 83.04 ATOM 257 C GLY C 33 -46.302 45.058 -9.452 1.00 85.87 ATOM 258 O GLY C 33 -47.532 45.074 -9.712 1.00 85.21 ATOM 259 OXT GLY C 33 -45.701 46.124 -9.059 1.00 86.61 TER