HEADER SIGNALING PROTEIN/LIGASE 06-MAY-09 3HCT TITLE Crystal structure of TRAF6 in complex with Ubc13 in the P1 space COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF receptor-associated factor 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RING and Zinc Finger 1: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.10 ANGSTORMS DBREF 3HCT A 50 159 UNP Q9Y4K3 TRAF6_HUMAN 50 159 SEQRES 1 A 28 LEU MET VAL LYS CYS PRO ASN GLU GLY CYS LEU HIS LYS SEQRES 2 A 28 MET GLU LEU ARG HIS LEU GLU ASP HIS GLN ALA HIS CYS SEQRES 3 A 28 GLU PHE ATOM 1 N LEU A 81 -12.942 3.807 15.226 1.00 33.78 ATOM 2 CA LEU A 81 -11.768 4.498 14.718 1.00 34.80 ATOM 3 C LEU A 81 -10.728 4.646 15.828 1.00 36.73 ATOM 4 O LEU A 81 -11.075 4.811 17.004 1.00 35.09 ATOM 5 CB LEU A 81 -12.151 5.895 14.204 1.00 33.90 ATOM 6 CG LEU A 81 -13.151 6.016 13.044 1.00 31.19 ATOM 7 CD1 LEU A 81 -13.444 7.487 12.775 1.00 27.14 ATOM 8 CD2 LEU A 81 -12.585 5.349 11.793 1.00 30.49 ATOM 9 N MET A 82 -9.454 4.596 15.451 1.00 38.66 ATOM 10 CA MET A 82 -8.369 4.750 16.414 1.00 41.37 ATOM 11 C MET A 82 -8.164 6.219 16.786 1.00 42.44 ATOM 12 O MET A 82 -8.119 7.089 15.915 1.00 40.59 ATOM 13 CB MET A 82 -7.069 4.178 15.844 1.00 40.71 ATOM 14 CG MET A 82 -7.044 2.663 15.772 1.00 43.71 ATOM 15 SD MET A 82 -7.387 1.900 17.380 1.00 44.63 ATOM 16 CE MET A 82 -5.877 2.308 18.286 1.00 46.59 ATOM 17 N VAL A 83 -8.045 6.481 18.085 1.00 45.30 ATOM 18 CA VAL A 83 -7.840 7.834 18.600 1.00 49.71 ATOM 19 C VAL A 83 -6.641 7.864 19.553 1.00 52.64 ATOM 20 O VAL A 83 -6.183 6.819 20.015 1.00 53.43 ATOM 21 CB VAL A 83 -9.094 8.334 19.360 1.00 50.63 ATOM 22 CG1 VAL A 83 -8.855 9.730 19.907 1.00 51.60 ATOM 23 CG2 VAL A 83 -10.303 8.332 18.430 1.00 51.34 ATOM 24 N LYS A 84 -6.139 9.062 19.844 1.00 55.38 ATOM 25 CA LYS A 84 -5.000 9.229 20.742 1.00 58.77 ATOM 26 C LYS A 84 -5.380 10.032 21.991 1.00 61.57 ATOM 27 O LYS A 84 -6.270 10.883 21.941 1.00 62.06 ATOM 28 CB LYS A 84 -3.850 9.919 20.000 1.00 57.25 ATOM 29 CG LYS A 84 -3.308 9.099 18.838 1.00 58.13 ATOM 30 CD LYS A 84 -2.096 9.746 18.178 1.00 57.58 ATOM 31 CE LYS A 84 -2.470 11.016 17.436 1.00 58.23 ATOM 32 NZ LYS A 84 -1.311 11.586 16.696 1.00 56.62 ATOM 33 N CYS A 85 -4.704 9.753 23.105 1.00 64.18 ATOM 34 CA CYS A 85 -4.967 10.440 24.370 1.00 67.65 ATOM 35 C CYS A 85 -4.835 11.956 24.237 1.00 69.39 ATOM 36 O CYS A 85 -3.871 12.456 23.655 1.00 69.67 ATOM 37 CB CYS A 85 -4.009 9.938 25.457 1.00 69.14 ATOM 38 SG CYS A 85 -4.262 10.685 27.098 1.00 69.62 ATOM 39 N PRO A 86 -5.806 12.705 24.787 1.00 71.13 ATOM 40 CA PRO A 86 -5.839 14.171 24.751 1.00 73.04 ATOM 41 C PRO A 86 -4.890 14.883 25.717 1.00 74.74 ATOM 42 O PRO A 86 -5.315 15.752 26.479 1.00 74.88 ATOM 43 CB PRO A 86 -7.301 14.480 25.054 1.00 72.63 ATOM 44 CG PRO A 86 -7.645 13.414 26.036 1.00 72.18 ATOM 45 CD PRO A 86 -7.038 12.176 25.402 1.00 71.70 ATOM 46 N ASN A 87 -3.610 14.520 25.678 1.00 76.86 ATOM 47 CA ASN A 87 -2.606 15.142 26.543 1.00 78.96 ATOM 48 C ASN A 87 -1.247 14.465 26.388 1.00 79.90 ATOM 49 O ASN A 87 -1.160 13.238 26.320 1.00 79.63 ATOM 50 CB ASN A 87 -3.037 15.073 28.010 1.00 79.31 ATOM 51 CG ASN A 87 -2.154 15.911 28.914 1.00 80.08 ATOM 52 OD1 ASN A 87 -0.932 15.751 28.930 1.00 79.77 ATOM 53 ND2 ASN A 87 -2.769 16.811 29.675 1.00 79.70 ATOM 54 N GLU A 88 -0.187 15.267 26.338 1.00 81.12 ATOM 55 CA GLU A 88 1.160 14.728 26.188 1.00 81.94 ATOM 56 C GLU A 88 1.513 13.826 27.366 1.00 81.84 ATOM 57 O GLU A 88 0.988 13.991 28.469 1.00 82.12 ATOM 58 CB GLU A 88 2.188 15.858 26.073 1.00 82.61 ATOM 59 CG GLU A 88 2.380 16.675 27.340 1.00 83.79 ATOM 60 CD GLU A 88 3.504 17.686 27.209 1.00 84.51 ATOM 61 OE1 GLU A 88 3.795 18.389 28.201 1.00 85.11 ATOM 62 OE2 GLU A 88 4.099 17.778 26.114 1.00 84.86 ATOM 63 N GLY A 89 2.409 12.876 27.123 1.00 80.96 ATOM 64 CA GLY A 89 2.809 11.948 28.163 1.00 79.82 ATOM 65 C GLY A 89 2.503 10.528 27.728 1.00 79.11 ATOM 66 O GLY A 89 3.403 9.694 27.633 1.00 79.69 ATOM 67 N CYS A 90 1.229 10.254 27.458 1.00 77.79 ATOM 68 CA CYS A 90 0.807 8.928 27.018 1.00 76.36 ATOM 69 C CYS A 90 1.062 8.774 25.522 1.00 75.80 ATOM 70 O CYS A 90 1.019 9.751 24.772 1.00 75.49 ATOM 71 CB CYS A 90 -0.681 8.713 27.311 1.00 75.56 ATOM 72 SG CYS A 90 -1.294 7.057 26.892 1.00 72.61 ATOM 73 N LEU A 91 1.327 7.544 25.094 1.00 75.28 ATOM 74 CA LEU A 91 1.593 7.259 23.690 1.00 74.39 ATOM 75 C LEU A 91 0.571 6.273 23.139 1.00 73.55 ATOM 76 O LEU A 91 0.530 6.007 21.937 1.00 73.50 ATOM 77 CB LEU A 91 3.005 6.686 23.533 1.00 75.29 ATOM 78 CG LEU A 91 3.431 6.205 22.141 1.00 75.74 ATOM 79 CD1 LEU A 91 3.296 7.337 21.131 1.00 75.64 ATOM 80 CD2 LEU A 91 4.867 5.699 22.199 1.00 75.91 ATOM 81 N HIS A 92 -0.260 5.738 24.026 1.00 72.42 ATOM 82 CA HIS A 92 -1.279 4.775 23.634 1.00 71.30 ATOM 83 C HIS A 92 -2.401 5.363 22.785 1.00 69.96 ATOM 84 O HIS A 92 -2.779 6.529 22.932 1.00 69.00 ATOM 85 CB HIS A 92 -1.883 4.107 24.874 1.00 72.47 ATOM 86 CG HIS A 92 -1.104 2.926 25.366 1.00 73.80 ATOM 87 ND1 HIS A 92 -1.449 2.228 26.503 1.00 74.42 ATOM 88 CD2 HIS A 92 -0.010 2.306 24.863 1.00 74.77 ATOM 89 CE1 HIS A 92 -0.603 1.229 26.679 1.00 74.50 ATOM 90 NE2 HIS A 92 0.281 1.254 25.697 1.00 75.13 ATOM 91 N LYS A 93 -2.922 4.530 21.891 1.00 67.95 ATOM 92 CA LYS A 93 -4.019 4.900 21.008 1.00 65.82 ATOM 93 C LYS A 93 -5.047 3.783 21.124 1.00 63.47 ATOM 94 O LYS A 93 -4.683 2.611 21.223 1.00 63.44 ATOM 95 CB LYS A 93 -3.533 4.996 19.560 1.00 66.76 ATOM 96 CG LYS A 93 -2.347 5.921 19.350 1.00 67.75 ATOM 97 CD LYS A 93 -1.881 5.876 17.904 1.00 69.04 ATOM 98 CE LYS A 93 -0.622 6.701 17.696 1.00 70.26 ATOM 99 NZ LYS A 93 -0.155 6.638 16.283 1.00 70.92 ATOM 100 N MET A 94 -6.326 4.137 21.120 1.00 60.49 ATOM 101 CA MET A 94 -7.375 3.128 21.226 1.00 58.36 ATOM 102 C MET A 94 -8.612 3.516 20.426 1.00 54.94 ATOM 103 O MET A 94 -8.751 4.667 20.006 1.00 53.60 ATOM 104 CB MET A 94 -7.763 2.913 22.694 1.00 59.49 ATOM 105 CG MET A 94 -8.330 4.142 23.403 1.00 61.12 ATOM 106 SD MET A 94 -7.089 5.366 23.881 1.00 65.25 ATOM 107 CE MET A 94 -7.407 6.668 22.699 1.00 65.42 ATOM 108 N GLU A 95 -9.503 2.550 20.205 1.00 51.28 ATOM 109 CA GLU A 95 -10.731 2.824 19.471 1.00 47.69 ATOM 110 C GLU A 95 -11.508 3.847 20.288 1.00 45.41 ATOM 111 O GLU A 95 -11.567 3.760 21.515 1.00 43.56 ATOM 112 CB GLU A 95 -11.567 1.552 19.295 1.00 48.93 ATOM 113 CG GLU A 95 -10.826 0.397 18.636 1.00 48.91 ATOM 114 CD GLU A 95 -11.765 -0.667 18.090 1.00 49.45 ATOM 115 OE1 GLU A 95 -12.741 -1.019 18.782 1.00 48.79 ATOM 116 OE2 GLU A 95 -11.522 -1.160 16.968 1.00 48.48 ATOM 117 N LEU A 96 -12.095 4.819 19.602 1.00 43.67 ATOM 118 CA LEU A 96 -12.851 5.878 20.253 1.00 41.31 ATOM 119 C LEU A 96 -13.756 5.389 21.380 1.00 42.12 ATOM 120 O LEU A 96 -13.873 6.045 22.415 1.00 41.53 ATOM 121 CB LEU A 96 -13.679 6.638 19.210 1.00 40.04 ATOM 122 CG LEU A 96 -14.556 7.783 19.720 1.00 39.86 ATOM 123 CD1 LEU A 96 -13.724 8.742 20.567 1.00 38.02 ATOM 124 CD2 LEU A 96 -15.179 8.506 18.531 1.00 38.28 ATOM 125 N ARG A 97 -14.388 4.237 21.182 1.00 43.54 ATOM 126 CA ARG A 97 -15.288 3.676 22.183 1.00 46.17 ATOM 127 C ARG A 97 -14.554 3.199 23.440 1.00 47.82 ATOM 128 O ARG A 97 -15.176 2.934 24.471 1.00 46.71 ATOM 129 CB ARG A 97 -16.083 2.517 21.570 1.00 47.30 ATOM 130 CG ARG A 97 -15.242 1.307 21.192 1.00 49.46 ATOM 131 CD ARG A 97 -15.993 0.384 20.246 1.00 53.42 ATOM 132 NE ARG A 97 -17.361 0.137 20.695 1.00 57.54 ATOM 133 CZ ARG A 97 -18.231 -0.642 20.059 1.00 59.19 ATOM 134 NH1 ARG A 97 -17.877 -1.259 18.938 1.00 59.32 ATOM 135 NH2 ARG A 97 -19.458 -0.801 20.542 1.00 58.91 ATOM 136 N HIS A 98 -13.231 3.100 23.354 1.00 49.94 ATOM 137 CA HIS A 98 -12.423 2.646 24.483 1.00 51.52 ATOM 138 C HIS A 98 -11.593 3.749 25.124 1.00 54.88 ATOM 139 O HIS A 98 -10.733 3.482 25.969 1.00 56.32 ATOM 140 CB HIS A 98 -11.516 1.504 24.033 1.00 47.68 ATOM 141 CG HIS A 98 -12.267 0.271 23.649 1.00 44.23 ATOM 142 ND1 HIS A 98 -11.720 -0.727 22.871 1.00 41.95 ATOM 143 CD2 HIS A 98 -13.530 -0.124 23.937 1.00 43.71 ATOM 144 CE1 HIS A 98 -12.616 -1.683 22.696 1.00 41.82 ATOM 145 NE2 HIS A 98 -13.721 -1.342 23.332 1.00 42.32 ATOM 146 N LEU A 99 -11.858 4.988 24.727 1.00 57.22 ATOM 147 CA LEU A 99 -11.144 6.138 25.266 1.00 60.08 ATOM 148 C LEU A 99 -11.597 6.422 26.697 1.00 62.01 ATOM 149 O LEU A 99 -10.796 6.795 27.552 1.00 61.55 ATOM 150 CB LEU A 99 -11.400 7.365 24.389 1.00 60.90 ATOM 151 CG LEU A 99 -10.852 8.703 24.890 1.00 61.88 ATOM 152 CD1 LEU A 99 -9.343 8.612 25.075 1.00 62.55 ATOM 153 CD2 LEU A 99 -11.211 9.796 23.897 1.00 61.47 ATOM 154 N GLU A 100 -12.890 6.240 26.941 1.00 64.51 ATOM 155 CA GLU A 100 -13.483 6.468 28.254 1.00 67.56 ATOM 156 C GLU A 100 -12.669 5.756 29.333 1.00 69.33 ATOM 157 O GLU A 100 -12.228 6.370 30.306 1.00 69.21 ATOM 158 CB GLU A 100 -14.921 5.941 28.262 1.00 68.71 ATOM 159 CG GLU A 100 -15.807 6.489 29.371 1.00 70.62 ATOM 160 CD GLU A 100 -16.153 7.953 29.171 1.00 71.64 ATOM 161 OE1 GLU A 100 -17.016 8.468 29.914 1.00 72.40 ATOM 162 OE2 GLU A 100 -15.563 8.590 28.272 1.00 72.42 ATOM 163 N ASP A 101 -12.473 4.455 29.144 1.00 71.66 ATOM 164 CA ASP A 101 -11.720 3.635 30.084 1.00 74.00 ATOM 165 C ASP A 101 -10.261 4.081 30.138 1.00 76.19 ATOM 166 O ASP A 101 -9.431 3.445 30.789 1.00 76.20 ATOM 167 CB ASP A 101 -11.798 2.164 29.666 1.00 73.32 ATOM 168 CG ASP A 101 -11.133 1.234 30.664 1.00 73.60 ATOM 169 OD1 ASP A 101 -11.634 1.119 31.805 1.00 72.74 ATOM 170 OD2 ASP A 101 -10.106 0.620 30.305 1.00 73.33 ATOM 171 N HIS A 102 -9.956 5.179 29.452 1.00 78.83 ATOM 172 CA HIS A 102 -8.598 5.711 29.418 1.00 81.58 ATOM 173 C HIS A 102 -8.634 7.231 29.548 1.00 83.39 ATOM 174 O HIS A 102 -7.695 7.923 29.151 1.00 83.47 ATOM 175 CB HIS A 102 -7.920 5.321 28.104 1.00 81.67 ATOM 176 CG HIS A 102 -6.424 5.359 28.157 1.00 82.54 ATOM 177 ND1 HIS A 102 -5.689 4.546 28.993 1.00 82.81 ATOM 178 CD2 HIS A 102 -5.525 6.097 27.464 1.00 82.56 ATOM 179 CE1 HIS A 102 -4.402 4.781 28.812 1.00 82.89 ATOM 180 NE2 HIS A 102 -4.275 5.717 27.889 1.00 83.02 ATOM 181 N GLN A 103 -9.728 7.744 30.102 1.00 85.66 ATOM 182 CA GLN A 103 -9.896 9.180 30.289 1.00 88.19 ATOM 183 C GLN A 103 -9.533 9.564 31.719 1.00 89.58 ATOM 184 O GLN A 103 -8.653 10.397 31.948 1.00 89.59 ATOM 185 CB GLN A 103 -11.345 9.582 29.998 1.00 88.88 ATOM 186 CG GLN A 103 -11.625 11.071 30.148 1.00 90.00 ATOM 187 CD GLN A 103 -10.823 11.918 29.177 1.00 90.29 ATOM 188 OE1 GLN A 103 -10.941 11.765 27.960 1.00 90.43 ATOM 189 NE2 GLN A 103 -10.003 12.817 29.712 1.00 90.18 ATOM 190 N ALA A 104 -10.219 8.951 32.677 1.00 90.89 ATOM 191 CA ALA A 104 -9.973 9.211 34.089 1.00 92.26 ATOM 192 C ALA A 104 -9.433 7.949 34.753 1.00 92.95 ATOM 193 O ALA A 104 -9.430 7.833 35.978 1.00 93.20 ATOM 194 CB ALA A 104 -11.263 9.654 34.772 1.00 92.23 ATOM 195 N HIS A 105 -8.977 7.007 33.932 1.00 93.98 ATOM 196 CA HIS A 105 -8.433 5.749 34.429 1.00 94.92 ATOM 197 C HIS A 105 -6.908 5.816 34.428 1.00 95.83 ATOM 198 O HIS A 105 -6.231 4.881 33.999 1.00 95.80 ATOM 199 CB HIS A 105 -8.910 4.589 33.549 1.00 94.71 ATOM 200 CG HIS A 105 -8.667 3.233 34.141 1.00 94.73 ATOM 201 ND1 HIS A 105 -9.000 2.067 33.487 1.00 94.15 ATOM 202 CD2 HIS A 105 -8.134 2.859 35.328 1.00 94.55 ATOM 203 CE1 HIS A 105 -8.684 1.032 34.246 1.00 93.88 ATOM 204 NE2 HIS A 105 -8.156 1.486 35.368 1.00 93.81 ATOM 205 N CYS A 106 -6.379 6.937 34.910 1.00 96.98 ATOM 206 CA CYS A 106 -4.937 7.153 34.978 1.00 97.68 ATOM 207 C CYS A 106 -4.580 7.844 36.293 1.00 97.28 ATOM 208 O CYS A 106 -5.218 7.607 37.319 1.00 97.29 ATOM 209 CB CYS A 106 -4.476 8.016 33.799 1.00 98.80 ATOM 210 SG CYS A 106 -4.872 7.341 32.166 1.00100.66 ATOM 211 N GLU A 107 -3.559 8.697 36.258 1.00 96.85 ATOM 212 CA GLU A 107 -3.128 9.420 37.449 1.00 96.33 ATOM 213 C GLU A 107 -3.836 10.767 37.585 1.00 95.60 ATOM 214 O GLU A 107 -4.912 10.848 38.177 1.00 95.35 ATOM 215 CB GLU A 107 -1.610 9.630 37.428 1.00 96.33 ATOM 216 CG GLU A 107 -0.804 8.359 37.655 1.00 96.67 ATOM 217 CD GLU A 107 0.691 8.613 37.698 1.00 97.16 ATOM 218 OE1 GLU A 107 1.129 9.454 38.511 1.00 96.87 ATOM 219 OE2 GLU A 107 1.429 7.968 36.923 1.00 97.18 ATOM 220 N PHE A 108 -3.234 11.819 37.036 1.00 94.55 ATOM 221 CA PHE A 108 -3.821 13.153 37.116 1.00 94.46 ATOM 222 C PHE A 108 -4.260 13.725 35.770 1.00 93.27 ATOM 223 O PHE A 108 -5.468 14.012 35.628 1.00 93.82 ATOM 224 CB PHE A 108 -2.846 14.116 37.807 1.00 95.32 ATOM 225 CG PHE A 108 -1.408 13.942 37.392 1.00 95.61 ATOM 226 CD1 PHE A 108 -1.008 14.170 36.079 1.00 95.80 ATOM 227 CD2 PHE A 108 -0.450 13.555 38.322 1.00 95.84 ATOM 228 CE1 PHE A 108 0.323 14.017 35.698 1.00 96.17 ATOM 229 CE2 PHE A 108 0.884 13.398 37.953 1.00 96.63 ATOM 230 CZ PHE A 108 1.271 13.630 36.637 1.00 96.65 TER