HEADER OXIDOREDUCTASE 31-DEC-69 3S39 TITLE Structure of Thermus thermophilus cytochrome ba3 oxidase 60s after Xe TITLE 2 depressurization COMPND MOL_ID: 3; COMPND 2 MOLECULE: Cytochrome c oxidase polypeptide 2A; COMPND 3 CHAIN: C; COMPND 4 EC: 1.9.3.1; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.80 ANGSTORMS DBREF 3S39 C 2 34 UNP P82543 COXA_THET8 2 34 SEQRES 1 C 33 GLU GLU LYS PRO LYS GLY ALA LEU ALA VAL ILE LEU VAL SEQRES 2 C 33 LEU THR LEU THR ILE LEU VAL PHE TRP LEU GLY VAL TYR SEQRES 3 C 33 ALA VAL PHE PHE ALA ARG GLY ATOM 1 N GLU C 1 8.986 1.988 15.130 1.00200.17 ATOM 2 CA GLU C 1 8.634 2.099 16.580 1.00200.17 ATOM 3 C GLU C 1 9.867 2.050 17.490 1.00200.17 ATOM 4 O GLU C 1 10.187 3.045 18.138 1.00200.17 ATOM 5 CB GLU C 1 7.610 1.031 16.992 1.00200.17 ATOM 6 CG GLU C 1 7.994 -0.392 16.597 1.00200.17 ATOM 7 CD GLU C 1 7.075 -1.439 17.189 1.00200.17 ATOM 8 OE1 GLU C 1 7.135 -1.655 18.425 1.00200.17 ATOM 9 OE2 GLU C 1 6.308 -2.059 16.418 1.00200.17 ATOM 10 N GLU C 2 10.543 0.898 17.543 1.00200.17 ATOM 11 CA GLU C 2 11.727 0.719 18.398 1.00200.17 ATOM 12 C GLU C 2 12.632 -0.443 17.924 1.00200.17 ATOM 13 O GLU C 2 12.536 -0.891 16.768 1.00200.17 ATOM 14 CB GLU C 2 11.310 0.569 19.885 1.00200.17 ATOM 15 CG GLU C 2 12.429 0.788 20.938 1.00200.17 ATOM 16 CD GLU C 2 13.281 2.041 20.697 1.00200.17 ATOM 17 OE1 GLU C 2 12.739 3.166 20.793 1.00200.17 ATOM 18 OE2 GLU C 2 14.496 1.897 20.429 1.00200.17 ATOM 19 N LYS C 3 13.519 -0.887 18.823 1.00200.17 ATOM 20 CA LYS C 3 14.466 -1.995 18.630 1.00200.17 ATOM 21 C LYS C 3 13.860 -3.214 17.913 1.00200.17 ATOM 22 O LYS C 3 12.807 -3.729 18.327 1.00200.17 ATOM 23 CB LYS C 3 15.038 -2.396 19.999 1.00200.17 ATOM 24 CG LYS C 3 16.088 -3.495 19.994 1.00200.17 ATOM 25 CD LYS C 3 16.690 -3.670 21.386 1.00200.17 ATOM 26 CE LYS C 3 15.627 -4.024 22.436 1.00200.17 ATOM 27 NZ LYS C 3 16.191 -4.108 23.842 1.00200.17 ATOM 28 N PRO C 4 14.528 -3.675 16.834 1.00200.17 ATOM 29 CA PRO C 4 14.042 -4.820 16.059 1.00200.17 ATOM 30 C PRO C 4 14.176 -6.146 16.821 1.00200.17 ATOM 31 O PRO C 4 15.104 -6.914 16.564 1.00200.17 ATOM 32 CB PRO C 4 14.938 -4.803 14.808 1.00200.17 ATOM 33 CG PRO C 4 15.607 -3.448 14.808 1.00200.17 ATOM 34 CD PRO C 4 15.739 -3.082 16.234 1.00200.17 ATOM 35 N LYS C 5 13.242 -6.399 17.741 1.00200.17 ATOM 36 CA LYS C 5 13.258 -7.592 18.596 1.00200.17 ATOM 37 C LYS C 5 13.090 -8.889 17.809 1.00200.17 ATOM 38 O LYS C 5 13.778 -9.875 18.077 1.00200.17 ATOM 39 CB LYS C 5 12.177 -7.488 19.674 1.00200.17 ATOM 40 CG LYS C 5 12.460 -6.428 20.730 1.00200.17 ATOM 41 CD LYS C 5 11.523 -6.555 21.923 1.00200.17 ATOM 42 CE LYS C 5 11.885 -7.762 22.801 1.00200.17 ATOM 43 NZ LYS C 5 11.017 -7.872 24.009 1.00200.17 ATOM 44 N GLY C 6 12.165 -8.881 16.852 1.00200.17 ATOM 45 CA GLY C 6 11.937 -10.030 15.982 1.00200.17 ATOM 46 C GLY C 6 13.090 -10.349 15.043 1.00200.17 ATOM 47 O GLY C 6 13.454 -11.517 14.886 1.00200.17 ATOM 48 N ALA C 7 13.653 -9.313 14.416 1.00200.17 ATOM 49 CA ALA C 7 14.808 -9.457 13.519 1.00200.17 ATOM 50 C ALA C 7 16.061 -9.948 14.250 1.00200.17 ATOM 51 O ALA C 7 16.783 -10.816 13.739 1.00200.17 ATOM 52 CB ALA C 7 15.094 -8.146 12.803 1.00200.17 ATOM 53 N LEU C 8 16.316 -9.377 15.430 1.00200.17 ATOM 54 CA LEU C 8 17.410 -9.828 16.298 1.00200.17 ATOM 55 C LEU C 8 17.214 -11.287 16.752 1.00200.17 ATOM 56 O LEU C 8 18.187 -12.041 16.851 1.00200.17 ATOM 57 CB LEU C 8 17.595 -8.891 17.506 1.00200.17 ATOM 58 CG LEU C 8 18.018 -7.429 17.275 1.00200.17 ATOM 59 CD1 LEU C 8 17.900 -6.648 18.572 1.00200.17 ATOM 60 CD2 LEU C 8 19.430 -7.300 16.705 1.00200.17 ATOM 61 N ALA C 9 15.959 -11.674 17.011 1.00200.17 ATOM 62 CA ALA C 9 15.598 -13.058 17.361 1.00200.17 ATOM 63 C ALA C 9 15.869 -14.034 16.209 1.00200.17 ATOM 64 O ALA C 9 16.314 -15.165 16.435 1.00200.17 ATOM 65 CB ALA C 9 14.134 -13.145 17.814 1.00200.17 ATOM 66 N VAL C 10 15.593 -13.589 14.982 1.00200.17 ATOM 67 CA VAL C 10 15.900 -14.364 13.778 1.00200.17 ATOM 68 C VAL C 10 17.412 -14.607 13.665 1.00200.17 ATOM 69 O VAL C 10 17.855 -15.759 13.663 1.00200.17 ATOM 70 CB VAL C 10 15.324 -13.687 12.494 1.00200.17 ATOM 71 CG1 VAL C 10 15.814 -14.377 11.224 1.00200.17 ATOM 72 CG2 VAL C 10 13.805 -13.686 12.529 1.00200.17 ATOM 73 N ILE C 11 18.192 -13.525 13.613 1.00200.17 ATOM 74 CA ILE C 11 19.650 -13.614 13.468 1.00200.17 ATOM 75 C ILE C 11 20.351 -14.231 14.685 1.00200.17 ATOM 76 O ILE C 11 21.548 -14.530 14.632 1.00200.17 ATOM 77 CB ILE C 11 20.283 -12.248 13.145 1.00200.17 ATOM 78 CG1 ILE C 11 20.168 -11.315 14.350 1.00200.17 ATOM 79 CG2 ILE C 11 19.641 -11.647 11.893 1.00200.17 ATOM 80 CD1 ILE C 11 21.259 -10.287 14.426 1.00200.17 ATOM 81 N LEU C 12 19.609 -14.402 15.777 1.00200.17 ATOM 82 CA LEU C 12 20.096 -15.159 16.919 1.00200.17 ATOM 83 C LEU C 12 20.027 -16.650 16.584 1.00200.17 ATOM 84 O LEU C 12 21.004 -17.381 16.763 1.00200.17 ATOM 85 CB LEU C 12 19.268 -14.843 18.169 1.00200.17 ATOM 86 CG LEU C 12 19.901 -15.002 19.560 1.00200.17 ATOM 87 CD1 LEU C 12 19.927 -16.457 20.063 1.00200.17 ATOM 88 CD2 LEU C 12 21.285 -14.343 19.635 1.00200.17 ATOM 89 N VAL C 13 18.871 -17.081 16.080 1.00200.17 ATOM 90 CA VAL C 13 18.664 -18.457 15.640 1.00200.17 ATOM 91 C VAL C 13 19.716 -18.827 14.590 1.00200.17 ATOM 92 O VAL C 13 20.352 -19.879 14.681 1.00200.17 ATOM 93 CB VAL C 13 17.231 -18.665 15.075 1.00200.17 ATOM 94 CG1 VAL C 13 17.031 -20.097 14.597 1.00200.17 ATOM 95 CG2 VAL C 13 16.181 -18.314 16.119 1.00200.17 ATOM 96 N LEU C 14 19.904 -17.944 13.612 1.00200.17 ATOM 97 CA LEU C 14 20.911 -18.139 12.573 1.00200.17 ATOM 98 C LEU C 14 22.293 -18.331 13.185 1.00200.17 ATOM 99 O LEU C 14 22.991 -19.286 12.851 1.00200.17 ATOM 100 CB LEU C 14 20.923 -16.958 11.595 1.00200.17 ATOM 101 CG LEU C 14 21.928 -16.985 10.433 1.00200.17 ATOM 102 CD1 LEU C 14 21.471 -17.950 9.317 1.00200.17 ATOM 103 CD2 LEU C 14 22.133 -15.575 9.873 1.00200.17 ATOM 104 N THR C 15 22.672 -17.433 14.091 1.00200.17 ATOM 105 CA THR C 15 23.981 -17.494 14.730 1.00200.17 ATOM 106 C THR C 15 24.176 -18.810 15.486 1.00200.17 ATOM 107 O THR C 15 25.213 -19.460 15.335 1.00200.17 ATOM 108 CB THR C 15 24.226 -16.277 15.652 1.00200.17 ATOM 109 OG1 THR C 15 24.243 -15.079 14.865 1.00200.17 ATOM 110 CG2 THR C 15 25.557 -16.404 16.370 1.00200.17 ATOM 111 N LEU C 16 23.177 -19.207 16.273 1.00200.17 ATOM 112 CA LEU C 16 23.253 -20.455 17.034 1.00200.17 ATOM 113 C LEU C 16 23.352 -21.668 16.112 1.00200.17 ATOM 114 O LEU C 16 24.151 -22.571 16.367 1.00200.17 ATOM 115 CB LEU C 16 22.073 -20.604 18.010 1.00200.17 ATOM 116 CG LEU C 16 22.064 -19.815 19.336 1.00200.17 ATOM 117 CD1 LEU C 16 20.813 -20.134 20.159 1.00200.17 ATOM 118 CD2 LEU C 16 23.318 -20.052 20.183 1.00200.17 ATOM 119 N THR C 17 22.556 -21.668 15.039 1.00200.17 ATOM 120 CA THR C 17 22.573 -22.733 14.024 1.00200.17 ATOM 121 C THR C 17 23.950 -22.857 13.369 1.00200.17 ATOM 122 O THR C 17 24.438 -23.967 13.129 1.00200.17 ATOM 123 CB THR C 17 21.507 -22.498 12.919 1.00200.17 ATOM 124 OG1 THR C 17 20.230 -22.256 13.519 1.00200.17 ATOM 125 CG2 THR C 17 21.395 -23.706 11.988 1.00200.17 ATOM 126 N ILE C 18 24.563 -21.711 13.077 1.00200.17 ATOM 127 CA ILE C 18 25.917 -21.667 12.538 1.00200.17 ATOM 128 C ILE C 18 26.895 -22.302 13.515 1.00200.17 ATOM 129 O ILE C 18 27.756 -23.080 13.111 1.00200.17 ATOM 130 CB ILE C 18 26.360 -20.222 12.241 1.00200.17 ATOM 131 CG1 ILE C 18 25.645 -19.694 10.998 1.00200.17 ATOM 132 CG2 ILE C 18 27.875 -20.141 12.042 1.00200.17 ATOM 133 CD1 ILE C 18 25.453 -18.156 11.017 1.00200.17 ATOM 134 N LEU C 19 26.741 -21.977 14.797 1.00200.17 ATOM 135 CA LEU C 19 27.634 -22.476 15.842 1.00200.17 ATOM 136 C LEU C 19 27.536 -23.974 16.106 1.00200.17 ATOM 137 O LEU C 19 28.550 -24.626 16.347 1.00200.17 ATOM 138 CB LEU C 19 27.413 -21.709 17.138 1.00200.17 ATOM 139 CG LEU C 19 27.932 -20.274 17.088 1.00200.17 ATOM 140 CD1 LEU C 19 27.486 -19.541 18.338 1.00200.17 ATOM 141 CD2 LEU C 19 29.457 -20.222 16.916 1.00200.17 ATOM 142 N VAL C 20 26.317 -24.506 16.074 1.00200.17 ATOM 143 CA VAL C 20 26.082 -25.943 16.226 1.00200.17 ATOM 144 C VAL C 20 26.688 -26.729 15.058 1.00200.17 ATOM 145 O VAL C 20 27.338 -27.755 15.262 1.00200.17 ATOM 146 CB VAL C 20 24.572 -26.242 16.354 1.00200.17 ATOM 147 CG1 VAL C 20 24.285 -27.728 16.171 1.00200.17 ATOM 148 CG2 VAL C 20 24.049 -25.745 17.699 1.00200.17 ATOM 149 N PHE C 21 26.466 -26.236 13.843 1.00200.17 ATOM 150 CA PHE C 21 27.064 -26.812 12.649 1.00200.17 ATOM 151 C PHE C 21 28.592 -26.783 12.677 1.00200.17 ATOM 152 O PHE C 21 29.237 -27.817 12.506 1.00200.17 ATOM 153 CB PHE C 21 26.541 -26.093 11.407 1.00200.17 ATOM 154 CG PHE C 21 25.306 -26.711 10.832 1.00200.17 ATOM 155 CD1 PHE C 21 24.093 -26.636 11.508 1.00200.17 ATOM 156 CD2 PHE C 21 25.356 -27.376 9.610 1.00200.17 ATOM 157 CE1 PHE C 21 22.946 -27.211 10.979 1.00200.17 ATOM 158 CE2 PHE C 21 24.215 -27.957 9.067 1.00200.17 ATOM 159 CZ PHE C 21 23.007 -27.875 9.754 1.00200.17 ATOM 160 N TRP C 22 29.162 -25.603 12.915 1.00200.17 ATOM 161 CA TRP C 22 30.607 -25.411 12.836 1.00200.17 ATOM 162 C TRP C 22 31.391 -26.114 13.927 1.00200.17 ATOM 163 O TRP C 22 32.355 -26.816 13.635 1.00200.17 ATOM 164 CB TRP C 22 30.953 -23.937 12.866 1.00200.17 ATOM 165 CG TRP C 22 32.200 -23.680 12.159 1.00200.17 ATOM 166 CD1 TRP C 22 32.334 -23.415 10.831 1.00200.17 ATOM 167 CD2 TRP C 22 33.522 -23.690 12.708 1.00200.17 ATOM 168 NE1 TRP C 22 33.654 -23.237 10.515 1.00200.17 ATOM 169 CE2 TRP C 22 34.409 -23.398 11.647 1.00200.17 ATOM 170 CE3 TRP C 22 34.045 -23.901 13.992 1.00200.17 ATOM 171 CZ2 TRP C 22 35.797 -23.313 11.826 1.00200.17 ATOM 172 CZ3 TRP C 22 35.426 -23.816 14.172 1.00200.17 ATOM 173 CH2 TRP C 22 36.285 -23.524 13.090 1.00200.17 ATOM 174 N LEU C 23 30.993 -25.889 15.177 1.00200.17 ATOM 175 CA LEU C 23 31.596 -26.558 16.327 1.00200.17 ATOM 176 C LEU C 23 31.283 -28.062 16.378 1.00200.17 ATOM 177 O LEU C 23 32.085 -28.854 16.894 1.00200.17 ATOM 178 CB LEU C 23 31.154 -25.876 17.628 1.00200.17 ATOM 179 CG LEU C 23 32.001 -24.751 18.246 1.00200.17 ATOM 180 CD1 LEU C 23 32.809 -23.954 17.219 1.00200.17 ATOM 181 CD2 LEU C 23 31.120 -23.822 19.080 1.00200.17 ATOM 182 N GLY C 24 30.116 -28.447 15.854 1.00200.17 ATOM 183 CA GLY C 24 29.724 -29.857 15.759 1.00200.17 ATOM 184 C GLY C 24 30.606 -30.640 14.804 1.00200.17 ATOM 185 O GLY C 24 30.963 -31.785 15.085 1.00200.17 ATOM 186 N VAL C 25 30.956 -30.013 13.681 1.00200.17 ATOM 187 CA VAL C 25 31.841 -30.613 12.675 1.00200.17 ATOM 188 C VAL C 25 33.341 -30.371 12.966 1.00200.17 ATOM 189 O VAL C 25 34.195 -31.175 12.570 1.00200.17 ATOM 190 CB VAL C 25 31.446 -30.155 11.242 1.00200.17 ATOM 191 CG1 VAL C 25 32.479 -30.596 10.207 1.00200.17 ATOM 192 CG2 VAL C 25 30.063 -30.708 10.878 1.00200.17 ATOM 193 N TYR C 26 33.653 -29.276 13.661 1.00200.17 ATOM 194 CA TYR C 26 35.013 -29.012 14.150 1.00200.17 ATOM 195 C TYR C 26 35.448 -30.076 15.161 1.00200.17 ATOM 196 O TYR C 26 36.633 -30.402 15.261 1.00200.17 ATOM 197 CB TYR C 26 35.089 -27.622 14.789 1.00200.17 ATOM 198 CG TYR C 26 36.486 -27.150 15.119 1.00200.17 ATOM 199 CD1 TYR C 26 37.370 -26.769 14.105 1.00200.17 ATOM 200 CD2 TYR C 26 36.919 -27.064 16.444 1.00200.17 ATOM 201 CE1 TYR C 26 38.652 -26.325 14.395 1.00200.17 ATOM 202 CE2 TYR C 26 38.205 -26.619 16.750 1.00200.17 ATOM 203 CZ TYR C 26 39.065 -26.249 15.717 1.00200.17 ATOM 204 OH TYR C 26 40.340 -25.809 15.996 1.00200.17 ATOM 205 N ALA C 27 34.478 -30.600 15.910 1.00200.17 ATOM 206 CA ALA C 27 34.704 -31.680 16.863 1.00200.17 ATOM 207 C ALA C 27 34.980 -33.008 16.150 1.00200.17 ATOM 208 O ALA C 27 35.949 -33.700 16.479 1.00200.17 ATOM 209 CB ALA C 27 33.510 -31.810 17.810 1.00200.17 ATOM 210 N VAL C 28 34.129 -33.350 15.180 1.00200.17 ATOM 211 CA VAL C 28 34.273 -34.578 14.388 1.00200.17 ATOM 212 C VAL C 28 35.581 -34.608 13.604 1.00200.17 ATOM 213 O VAL C 28 36.177 -35.676 13.437 1.00200.17 ATOM 214 CB VAL C 28 33.095 -34.769 13.408 1.00200.17 ATOM 215 CG1 VAL C 28 33.334 -35.966 12.489 1.00200.17 ATOM 216 CG2 VAL C 28 31.795 -34.940 14.175 1.00200.17 ATOM 217 N PHE C 29 36.012 -33.443 13.122 1.00200.17 ATOM 218 CA PHE C 29 37.289 -33.319 12.420 1.00200.17 ATOM 219 C PHE C 29 38.461 -33.821 13.266 1.00200.17 ATOM 220 O PHE C 29 39.330 -34.532 12.759 1.00200.17 ATOM 221 CB PHE C 29 37.550 -31.872 11.985 1.00200.17 ATOM 222 CG PHE C 29 38.934 -31.652 11.422 1.00200.17 ATOM 223 CD1 PHE C 29 39.268 -32.144 10.162 1.00200.17 ATOM 224 CD2 PHE C 29 39.906 -30.964 12.155 1.00200.17 ATOM 225 CE1 PHE C 29 40.550 -31.950 9.637 1.00200.17 ATOM 226 CE2 PHE C 29 41.190 -30.767 11.639 1.00200.17 ATOM 227 CZ PHE C 29 41.512 -31.256 10.379 1.00200.17 ATOM 228 N PHE C 30 38.482 -33.436 14.544 1.00200.17 ATOM 229 CA PHE C 30 39.534 -33.847 15.487 1.00200.17 ATOM 230 C PHE C 30 39.359 -35.269 16.033 1.00200.17 ATOM 231 O PHE C 30 40.337 -35.923 16.424 1.00200.17 ATOM 232 CB PHE C 30 39.628 -32.858 16.651 1.00200.17 ATOM 233 CG PHE C 30 40.435 -31.631 16.340 1.00200.17 ATOM 234 CD1 PHE C 30 41.824 -31.709 16.197 1.00200.17 ATOM 235 CD2 PHE C 30 39.815 -30.395 16.196 1.00200.17 ATOM 236 CE1 PHE C 30 42.580 -30.577 15.911 1.00200.17 ATOM 237 CE2 PHE C 30 40.564 -29.256 15.909 1.00200.17 ATOM 238 CZ PHE C 30 41.948 -29.349 15.767 1.00200.17 ATOM 239 N ALA C 31 38.105 -35.722 16.077 1.00200.17 ATOM 240 CA ALA C 31 37.770 -37.099 16.434 1.00200.17 ATOM 241 C ALA C 31 38.255 -38.105 15.380 1.00200.17 ATOM 242 O ALA C 31 38.522 -39.264 15.710 1.00200.17 ATOM 243 CB ALA C 31 36.268 -37.236 16.647 1.00200.17 ATOM 244 N ARG C 32 38.356 -37.660 14.123 1.00200.17 ATOM 245 CA ARG C 32 38.878 -38.487 13.017 1.00200.17 ATOM 246 C ARG C 32 40.333 -38.157 12.617 1.00200.17 ATOM 247 O ARG C 32 40.806 -38.600 11.559 1.00200.17 ATOM 248 CB ARG C 32 37.992 -38.353 11.779 1.00200.17 ATOM 249 CG ARG C 32 36.595 -38.899 11.900 1.00200.17 ATOM 250 CD ARG C 32 35.881 -38.536 10.627 1.00200.17 ATOM 251 NE ARG C 32 34.482 -38.939 10.606 1.00200.17 ATOM 252 CZ ARG C 32 33.662 -38.718 9.579 1.00200.17 ATOM 253 NH1 ARG C 32 32.401 -39.121 9.635 1.00200.17 ATOM 254 NH2 ARG C 32 34.102 -38.104 8.484 1.00200.17 ATOM 255 N GLY C 33 41.030 -37.389 13.462 1.00200.17 ATOM 256 CA GLY C 33 42.412 -36.963 13.198 1.00200.17 ATOM 257 C GLY C 33 43.477 -37.993 13.547 1.00200.17 ATOM 258 O GLY C 33 43.308 -38.800 14.481 1.00200.17 ATOM 259 OXT GLY C 33 44.545 -38.049 12.905 1.00200.17 TER