HEADER TRANSFERASE/DNA 12-MAR-14 4P4O TITLE Crystal structure of Leishmania infantum polymerase beta: Ternary gap TITLE 2 complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA polymerase beta; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.30 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 76 REMARK 465 GLU A 77 REMARK 465 ILE A 78 REMARK 465 MET A 79 REMARK 465 ALA A 80 REMARK 465 THR A 81 REMARK 465 GLY A 82 REMARK 465 LYS A 83 REMARK 465 LEU A 84 REMARK 465 GLU A 85 REMARK 465 GLU A 86 REMARK 465 LEU A 87 REMARK 465 GLU A 88 REMARK 465 SER A 89 DBREF 4P4O A 1 376 UNP Q9U6N3 Q9U6N3_LEII 1 376 SEQRES 1 A 40 GLN GLU MET ALA ASP LEU ASN ASN ALA LEU GLY GLU LYS SEQRES 2 A 40 TYR LYS VAL SER SER TYR HIS LYS LEU LEU LYS LYS ALA SEQRES 3 A 40 GLU GLU ILE MET ALA THR GLY LYS LEU GLU GLU LEU GLU SEQRES 4 A 40 SER ATOM 1 N GLN A 22 4.283 37.644 99.272 1.00 86.04 ATOM 2 CA GLN A 22 3.228 36.918 99.978 1.00 87.70 ATOM 3 C GLN A 22 2.072 36.590 99.035 1.00 85.49 ATOM 4 O GLN A 22 1.885 35.437 98.644 1.00 81.34 ATOM 5 CB GLN A 22 2.726 37.721 101.182 1.00 88.20 ATOM 6 N GLU A 23 1.298 37.607 98.670 1.00 84.47 ATOM 7 CA GLU A 23 0.244 37.424 97.683 1.00 79.97 ATOM 8 C GLU A 23 0.874 37.102 96.336 1.00 75.62 ATOM 9 O GLU A 23 0.178 36.882 95.347 1.00 64.49 ATOM 10 CB GLU A 23 -0.657 38.656 97.597 1.00 77.96 ATOM 11 CG GLU A 23 -1.536 38.841 98.826 1.00 81.78 ATOM 12 CD GLU A 23 -2.604 39.897 98.629 1.00 85.58 ATOM 13 OE1 GLU A 23 -2.522 40.643 97.630 1.00 84.57 ATOM 14 OE2 GLU A 23 -3.526 39.979 99.471 1.00 89.33 ATOM 15 N MET A 24 2.205 37.074 96.320 1.00 83.02 ATOM 16 CA MET A 24 2.965 36.566 95.184 1.00 81.51 ATOM 17 C MET A 24 2.788 35.059 95.091 1.00 81.79 ATOM 18 O MET A 24 3.331 34.414 94.197 1.00 77.39 ATOM 19 CB MET A 24 4.447 36.918 95.317 1.00 80.55 ATOM 20 CG MET A 24 4.810 38.278 94.749 1.00 76.92 ATOM 21 SD MET A 24 4.638 38.302 92.957 1.00114.84 ATOM 22 CE MET A 24 5.739 36.961 92.509 1.00101.47 ATOM 23 N ALA A 25 2.024 34.508 96.031 1.00 87.92 ATOM 24 CA ALA A 25 1.553 33.134 95.939 1.00 94.60 ATOM 25 C ALA A 25 0.510 33.054 94.830 1.00 98.14 ATOM 26 O ALA A 25 -0.425 32.256 94.891 1.00101.25 ATOM 27 CB ALA A 25 0.959 32.688 97.258 1.00100.83 ATOM 28 N ASP A 26 0.675 33.912 93.828 1.00 93.99 ATOM 29 CA ASP A 26 -0.135 33.884 92.623 1.00 87.87 ATOM 30 C ASP A 26 0.538 33.022 91.585 1.00 79.32 ATOM 31 O ASP A 26 -0.123 32.381 90.770 1.00 75.09 ATOM 32 CB ASP A 26 -0.287 35.285 92.066 1.00 92.26 ATOM 33 CG ASP A 26 -1.405 36.029 92.712 1.00102.01 ATOM 34 OD1 ASP A 26 -1.683 35.743 93.897 1.00106.73 ATOM 35 OD2 ASP A 26 -2.011 36.880 92.030 1.00104.50 ATOM 36 N LEU A 27 1.866 33.038 91.610 1.00 77.76 ATOM 37 CA LEU A 27 2.663 32.115 90.825 1.00 75.03 ATOM 38 C LEU A 27 2.050 30.737 91.027 1.00 75.17 ATOM 39 O LEU A 27 2.063 29.886 90.137 1.00 78.07 ATOM 40 CB LEU A 27 4.110 32.139 91.315 1.00 72.09 ATOM 41 CG LEU A 27 4.671 33.525 91.652 1.00 68.99 ATOM 42 CD1 LEU A 27 6.117 33.430 92.126 1.00 72.10 ATOM 43 CD2 LEU A 27 4.554 34.471 90.467 1.00 65.06 ATOM 44 N ASN A 28 1.501 30.542 92.219 1.00 75.04 ATOM 45 CA ASN A 28 0.716 29.364 92.546 1.00 75.33 ATOM 46 C ASN A 28 -0.552 29.265 91.699 1.00 73.55 ATOM 47 O ASN A 28 -0.766 28.273 91.002 1.00 71.91 ATOM 48 CB ASN A 28 0.337 29.396 94.023 1.00 78.53 ATOM 49 CG ASN A 28 -0.677 28.340 94.381 1.00 81.05 ATOM 50 OD1 ASN A 28 -0.708 27.267 93.777 1.00 79.48 ATOM 51 ND2 ASN A 28 -1.520 28.636 95.366 1.00 83.58 ATOM 52 N ASN A 29 -1.394 30.294 91.776 1.00 69.24 ATOM 53 CA ASN A 29 -2.627 30.336 90.999 1.00 63.08 ATOM 54 C ASN A 29 -2.376 30.366 89.495 1.00 59.97 ATOM 55 O ASN A 29 -3.266 30.057 88.705 1.00 52.11 ATOM 56 CB ASN A 29 -3.489 31.524 91.413 1.00 61.13 ATOM 57 CG ASN A 29 -4.413 31.194 92.558 1.00 66.58 ATOM 58 OD1 ASN A 29 -5.443 30.544 92.370 1.00 65.27 ATOM 59 ND2 ASN A 29 -4.054 31.640 93.758 1.00 71.16 ATOM 60 N ALA A 30 -1.160 30.733 89.105 1.00 64.08 ATOM 61 CA ALA A 30 -0.769 30.673 87.706 1.00 65.72 ATOM 62 C ALA A 30 -0.900 29.247 87.186 1.00 69.02 ATOM 63 O ALA A 30 -0.449 28.943 86.082 1.00 69.87 ATOM 64 CB ALA A 30 0.647 31.188 87.513 1.00 62.77 ATOM 65 N LEU A 31 -1.473 28.374 88.018 1.00 69.67 ATOM 66 CA LEU A 31 -1.887 27.041 87.592 1.00 71.48 ATOM 67 C LEU A 31 -3.291 27.099 86.965 1.00 70.22 ATOM 68 O LEU A 31 -4.147 26.241 87.197 1.00 70.15 ATOM 69 CB LEU A 31 -1.795 26.015 88.738 1.00 73.67 ATOM 70 CG LEU A 31 -2.812 25.864 89.887 1.00 82.37 ATOM 71 CD1 LEU A 31 -3.384 27.190 90.376 1.00 86.12 ATOM 72 CD2 LEU A 31 -3.940 24.904 89.537 1.00 84.99 ATOM 73 N GLY A 32 -3.514 28.134 86.163 1.00 66.03 ATOM 74 CA GLY A 32 -4.723 28.229 85.368 1.00 69.05 ATOM 75 C GLY A 32 -5.631 29.367 85.788 1.00 72.39 ATOM 76 O GLY A 32 -6.282 29.987 84.949 1.00 74.16 ATOM 77 N GLU A 33 -5.676 29.641 87.089 1.00 70.18 ATOM 78 CA GLU A 33 -6.540 30.685 87.630 1.00 66.97 ATOM 79 C GLU A 33 -6.149 32.073 87.131 1.00 61.31 ATOM 80 O GLU A 33 -5.654 32.904 87.899 1.00 61.37 ATOM 81 CB GLU A 33 -6.509 30.650 89.154 1.00 71.43 ATOM 82 CG GLU A 33 -6.968 29.332 89.730 1.00 74.20 ATOM 83 CD GLU A 33 -8.408 29.034 89.389 1.00 76.15 ATOM 84 OE1 GLU A 33 -9.265 29.919 89.602 1.00 75.03 ATOM 85 OE2 GLU A 33 -8.680 27.917 88.900 1.00 77.99 ATOM 86 N LYS A 34 -6.388 32.314 85.843 1.00 51.98 ATOM 87 CA LYS A 34 -6.026 33.570 85.189 1.00 48.00 ATOM 88 C LYS A 34 -6.648 34.800 85.856 1.00 45.70 ATOM 89 O LYS A 34 -5.984 35.822 86.017 1.00 47.55 ATOM 90 CB LYS A 34 -6.387 33.509 83.696 1.00 47.06 ATOM 91 N TYR A 35 -7.912 34.701 86.251 1.00 43.91 ATOM 92 CA TYR A 35 -8.592 35.831 86.886 1.00 52.07 ATOM 93 C TYR A 35 -8.203 36.015 88.356 1.00 58.54 ATOM 94 O TYR A 35 -8.277 37.128 88.886 1.00 62.73 ATOM 95 CB TYR A 35 -10.113 35.711 86.734 1.00 54.26 ATOM 96 CG TYR A 35 -10.534 35.446 85.313 1.00 54.00 ATOM 97 CD1 TYR A 35 -10.459 36.444 84.349 1.00 53.10 ATOM 98 CD2 TYR A 35 -10.989 34.193 84.928 1.00 55.25 ATOM 99 CE1 TYR A 35 -10.833 36.199 83.039 1.00 53.93 ATOM 100 CE2 TYR A 35 -11.364 33.937 83.626 1.00 52.71 ATOM 101 CZ TYR A 35 -11.288 34.942 82.682 1.00 52.70 ATOM 102 OH TYR A 35 -11.665 34.684 81.378 1.00 47.42 ATOM 103 N LYS A 36 -7.791 34.933 89.012 1.00 56.39 ATOM 104 CA LYS A 36 -7.305 35.039 90.383 1.00 57.91 ATOM 105 C LYS A 36 -5.908 35.641 90.382 1.00 52.43 ATOM 106 O LYS A 36 -5.527 36.333 91.319 1.00 45.30 ATOM 107 CB LYS A 36 -7.302 33.681 91.095 1.00 57.02 ATOM 108 CG LYS A 36 -8.685 33.118 91.357 1.00 57.32 ATOM 109 CD LYS A 36 -8.646 31.911 92.287 1.00 59.41 ATOM 110 CE LYS A 36 -10.061 31.481 92.683 1.00 62.25 ATOM 111 NZ LYS A 36 -10.078 30.540 93.842 1.00 64.84 ATOM 112 N VAL A 37 -5.147 35.373 89.325 1.00 54.16 ATOM 113 CA VAL A 37 -3.807 35.938 89.203 1.00 59.58 ATOM 114 C VAL A 37 -3.879 37.458 89.099 1.00 63.85 ATOM 115 O VAL A 37 -3.276 38.180 89.897 1.00 62.51 ATOM 116 CB VAL A 37 -3.046 35.380 87.983 1.00 51.63 ATOM 117 CG1 VAL A 37 -1.813 36.224 87.704 1.00 49.27 ATOM 118 CG2 VAL A 37 -2.657 33.923 88.213 1.00 51.51 ATOM 119 N SER A 38 -4.632 37.934 88.113 1.00 64.25 ATOM 120 CA SER A 38 -4.808 39.364 87.899 1.00 64.91 ATOM 121 C SER A 38 -5.247 40.086 89.173 1.00 62.06 ATOM 122 O SER A 38 -4.881 41.240 89.399 1.00 62.25 ATOM 123 CB SER A 38 -5.822 39.612 86.780 1.00 63.17 ATOM 124 OG SER A 38 -5.405 38.990 85.578 1.00 65.20 ATOM 125 N SER A 39 -6.024 39.404 90.005 1.00 58.50 ATOM 126 CA SER A 39 -6.580 40.035 91.199 1.00 61.76 ATOM 127 C SER A 39 -5.524 40.430 92.237 1.00 64.50 ATOM 128 O SER A 39 -5.632 41.490 92.859 1.00 65.92 ATOM 129 CB SER A 39 -7.649 39.144 91.838 1.00 62.20 ATOM 130 OG SER A 39 -8.776 39.017 90.990 1.00 60.42 ATOM 131 N TYR A 40 -4.515 39.585 92.437 1.00 62.19 ATOM 132 CA TYR A 40 -3.480 39.903 93.416 1.00 69.55 ATOM 133 C TYR A 40 -2.541 40.984 92.882 1.00 70.78 ATOM 134 O TYR A 40 -2.162 41.903 93.613 1.00 77.34 ATOM 135 CB TYR A 40 -2.686 38.662 93.833 1.00 71.14 ATOM 136 CG TYR A 40 -3.483 37.577 94.539 1.00 72.47 ATOM 137 CD1 TYR A 40 -4.373 36.773 93.840 1.00 71.09 ATOM 138 CD2 TYR A 40 -3.323 37.339 95.899 1.00 72.44 ATOM 139 CE1 TYR A 40 -5.092 35.772 94.472 1.00 70.16 ATOM 140 CE2 TYR A 40 -4.039 36.338 96.540 1.00 72.47 ATOM 141 CZ TYR A 40 -4.924 35.558 95.820 1.00 70.82 ATOM 142 OH TYR A 40 -5.646 34.561 96.444 1.00 66.98 ATOM 143 N HIS A 41 -2.168 40.874 91.610 1.00 63.08 ATOM 144 CA HIS A 41 -1.386 41.919 90.959 1.00 62.08 ATOM 145 C HIS A 41 -2.017 43.294 91.191 1.00 59.74 ATOM 146 O HIS A 41 -3.231 43.467 91.047 1.00 57.01 ATOM 147 CB HIS A 41 -1.262 41.652 89.456 1.00 62.00 ATOM 148 CG HIS A 41 -0.206 40.649 89.097 1.00 65.89 ATOM 149 ND1 HIS A 41 0.543 39.985 90.044 1.00 67.75 ATOM 150 CD2 HIS A 41 0.226 40.205 87.894 1.00 64.97 ATOM 151 CE1 HIS A 41 1.393 39.171 89.436 1.00 66.47 ATOM 152 NE2 HIS A 41 1.220 39.285 88.134 1.00 63.96 ATOM 153 N LYS A 70 -8.215 40.879 98.322 1.00 69.47 ATOM 154 CA LYS A 70 -9.196 40.645 99.373 1.00 70.44 ATOM 155 C LYS A 70 -8.467 40.526 100.698 1.00 72.02 ATOM 156 O LYS A 70 -7.378 39.965 100.745 1.00 67.77 ATOM 157 CB LYS A 70 -9.975 39.364 99.077 1.00 69.77 ATOM 158 CG LYS A 70 -10.976 38.968 100.138 1.00 74.83 ATOM 159 CD LYS A 70 -11.452 37.539 99.930 1.00 73.75 ATOM 160 CE LYS A 70 -12.658 37.468 99.011 1.00 70.02 ATOM 161 NZ LYS A 70 -12.918 36.067 98.571 1.00 58.99 ATOM 162 N LEU A 71 -9.067 41.057 101.765 1.00 81.46 ATOM 163 CA LEU A 71 -8.453 41.055 103.097 1.00 82.69 ATOM 164 C LEU A 71 -8.555 39.688 103.775 1.00 87.40 ATOM 165 O LEU A 71 -9.665 39.277 104.127 1.00 86.96 ATOM 166 CB LEU A 71 -9.103 42.118 103.978 1.00 84.57 ATOM 167 N LEU A 72 -7.438 38.987 104.019 1.00 88.94 ATOM 168 CA LEU A 72 -6.035 39.459 103.969 1.00 87.13 ATOM 169 C LEU A 72 -5.544 40.008 105.307 1.00 94.75 ATOM 170 O LEU A 72 -4.438 39.682 105.745 1.00 97.76 ATOM 171 CB LEU A 72 -5.742 40.476 102.871 1.00 84.25 ATOM 172 CG LEU A 72 -4.419 41.214 103.089 1.00 86.52 ATOM 173 CD1 LEU A 72 -3.243 40.251 102.983 1.00 88.28 ATOM 174 CD2 LEU A 72 -4.271 42.354 102.104 1.00 88.30 ATOM 175 N LYS A 73 -6.355 40.852 105.942 1.00 92.51 ATOM 176 CA LYS A 73 -6.024 41.372 107.263 1.00 94.08 ATOM 177 C LYS A 73 -5.357 40.254 108.048 1.00 96.57 ATOM 178 O LYS A 73 -4.506 40.492 108.906 1.00101.17 ATOM 179 CB LYS A 73 -7.287 41.829 107.995 1.00 93.78 ATOM 180 CG LYS A 73 -8.189 42.743 107.182 1.00 79.00 ATOM 181 N LYS A 74 -5.758 39.028 107.728 1.00 91.59 ATOM 182 CA LYS A 74 -5.187 37.824 108.309 1.00 87.67 ATOM 183 C LYS A 74 -3.660 37.864 108.330 1.00 86.10 ATOM 184 O LYS A 74 -3.042 37.444 109.307 1.00 79.38 ATOM 185 CB LYS A 74 -5.682 36.598 107.538 1.00 84.71 ATOM 186 CG LYS A 74 -5.134 35.280 108.038 1.00 88.29 ATOM 187 CD LYS A 74 -5.823 34.118 107.354 1.00 88.72 ATOM 188 CE LYS A 74 -5.566 32.823 108.098 1.00 96.97 ATOM 189 NZ LYS A 74 -6.420 31.719 107.583 1.00101.12 ATOM 190 N ALA A 75 -3.058 38.369 107.254 1.00 74.00 ATOM 191 CA ALA A 75 -1.601 38.458 107.163 1.00 73.04 ATOM 192 C ALA A 75 -1.035 39.447 108.186 1.00 85.63 ATOM 193 O ALA A 75 -1.558 40.550 108.365 1.00 77.33 ATOM 194 CB ALA A 75 -1.173 38.841 105.757 1.00 69.22 TER