HEADER OXIDOREDUCTASE 13-APR-16 5JBI TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, LC52 and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 apicoplastic; COMPND 4 CHAIN: A, B; COMPND 5 EC: 1.1.1.267; COMPND 6 UNP residues ; COMPND 7 ENGINEERED: YES; COMPND 8 MATURE PROTEIN LACKS SIGNAL AND APICOPLAST TARGETING SEQUENCES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.70 ANGSTORMS DBREF 5JBI B 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 391 24.800 34.361 30.457 1.00 25.38 ATOM 2 CA SER A 391 26.259 34.207 30.411 0.50 25.95 ATOM 3 C SER A 391 26.764 34.136 28.968 1.00 27.13 ATOM 4 O SER A 391 26.174 33.427 28.146 1.00 26.02 ATOM 5 CB SER A 391 26.691 32.929 31.154 0.50 25.64 ATOM 6 OG SER A 391 26.308 32.941 32.525 0.50 24.80 ATOM 7 N GLU A 392 27.862 34.839 28.685 1.00 28.71 ATOM 8 CA GLU A 392 28.520 34.804 27.374 1.00 31.56 ATOM 9 C GLU A 392 29.385 33.556 27.214 1.00 30.58 ATOM 10 O GLU A 392 29.665 33.144 26.103 1.00 31.23 ATOM 11 CB GLU A 392 29.423 36.032 27.185 1.00 34.96 ATOM 12 CG GLU A 392 28.727 37.387 27.295 1.00 38.46 ATOM 13 CD GLU A 392 28.039 37.832 26.015 1.00 42.49 ATOM 14 OE1 GLU A 392 27.697 36.972 25.172 1.00 46.38 ATOM 15 OE2 GLU A 392 27.831 39.059 25.857 1.00 46.10 ATOM 16 N ASN A 393 29.827 32.993 28.333 1.00 29.07 ATOM 17 CA ASN A 393 30.721 31.845 28.371 1.00 29.52 ATOM 18 C ASN A 393 29.870 30.570 28.307 1.00 27.62 ATOM 19 O ASN A 393 28.936 30.406 29.080 1.00 24.18 ATOM 20 CB ASN A 393 31.564 31.921 29.659 1.00 30.74 ATOM 21 CG ASN A 393 32.452 30.718 29.863 1.00 33.09 ATOM 22 OD1 ASN A 393 31.986 29.646 30.243 1.00 33.71 ATOM 23 ND2 ASN A 393 33.749 30.896 29.646 1.00 34.87 ATOM 24 N SER A 394 30.206 29.684 27.380 1.00 27.07 ATOM 25 CA SER A 394 29.459 28.444 27.149 1.00 27.37 ATOM 26 C SER A 394 29.331 27.559 28.395 1.00 25.58 ATOM 27 O SER A 394 28.260 27.011 28.662 1.00 24.69 ATOM 28 CB SER A 394 30.114 27.656 26.011 1.00 29.05 ATOM 29 OG SER A 394 29.452 26.433 25.794 1.00 31.81 ATOM 30 N GLU A 395 30.412 27.429 29.159 1.00 24.78 ATOM 31 CA GLU A 395 30.393 26.583 30.358 1.00 24.17 ATOM 32 C GLU A 395 29.553 27.210 31.474 1.00 23.34 ATOM 33 O GLU A 395 28.794 26.507 32.154 1.00 23.21 ATOM 34 CB GLU A 395 31.816 26.262 30.832 1.00 24.34 ATOM 35 CG GLU A 395 32.507 25.231 29.952 1.00 24.53 ATOM 36 CD GLU A 395 33.990 25.064 30.253 1.00 24.99 ATOM 37 OE1 GLU A 395 34.728 24.598 29.358 1.00 24.54 ATOM 38 OE2 GLU A 395 34.423 25.391 31.367 1.00 24.31 ATOM 39 N ASP A 396 29.682 28.524 31.644 1.00 22.52 ATOM 40 CA ASP A 396 28.879 29.276 32.624 1.00 23.23 ATOM 41 C ASP A 396 27.389 29.239 32.278 1.00 21.37 ATOM 42 O ASP A 396 26.553 29.184 33.172 1.00 20.29 ATOM 43 CB ASP A 396 29.331 30.737 32.698 1.00 24.99 ATOM 44 CG ASP A 396 30.687 30.915 33.377 1.00 28.13 ATOM 45 OD1 ASP A 396 31.142 30.001 34.097 1.00 29.88 ATOM 46 OD2 ASP A 396 31.290 31.990 33.192 1.00 30.36 ATOM 47 N LEU A 397 27.073 29.297 30.985 1.00 21.10 ATOM 48 CA LEU A 397 25.683 29.240 30.514 1.00 20.00 ATOM 49 C LEU A 397 25.032 27.903 30.855 1.00 19.91 ATOM 50 O LEU A 397 23.883 27.866 31.326 1.00 17.91 ATOM 51 CB LEU A 397 25.611 29.490 29.004 1.00 20.76 ATOM 52 CG LEU A 397 24.228 29.514 28.336 1.00 20.42 ATOM 53 CD1 LEU A 397 23.288 30.494 29.029 1.00 20.71 ATOM 54 CD2 LEU A 397 24.353 29.843 26.861 1.00 20.74 ATOM 55 N MET A 398 25.738 26.803 30.607 1.00 20.33 ATOM 56 CA MET A 398 25.221 25.489 31.001 1.00 22.78 ATOM 57 C MET A 398 24.995 25.404 32.508 1.00 21.38 ATOM 58 O MET A 398 23.958 24.908 32.946 1.00 19.91 ATOM 59 CB MET A 398 26.136 24.346 30.543 1.00 25.62 ATOM 60 CG MET A 398 25.534 22.964 30.764 1.00 28.88 ATOM 61 SD MET A 398 24.026 22.737 29.796 1.00 37.15 ATOM 62 CE MET A 398 22.863 22.202 31.041 1.00 36.65 ATOM 63 N LYS A 399 25.960 25.889 33.301 1.00 21.03 ATOM 64 CA LYS A 399 25.790 25.899 34.754 1.00 21.23 ATOM 65 C LYS A 399 24.609 26.773 35.196 1.00 19.20 ATOM 66 O LYS A 399 23.881 26.409 36.106 1.00 18.37 ATOM 67 CB LYS A 399 27.095 26.288 35.467 1.00 23.49 ATOM 68 CG LYS A 399 28.119 25.154 35.452 1.00 25.43 ATOM 69 CD LYS A 399 29.563 25.633 35.598 1.00 27.97 ATOM 70 CE LYS A 399 29.794 26.403 36.884 1.00 30.29 ATOM 71 NZ LYS A 399 31.253 26.593 37.156 1.00 30.86 ATOM 72 N GLN A 400 24.408 27.902 34.515 1.00 18.68 ATOM 73 CA GLN A 400 23.266 28.793 34.755 1.00 18.10 ATOM 74 C GLN A 400 21.922 28.086 34.486 1.00 16.92 ATOM 75 O GLN A 400 20.998 28.143 35.300 1.00 16.48 ATOM 76 CB GLN A 400 23.445 30.029 33.871 1.00 19.32 ATOM 77 CG GLN A 400 22.505 31.163 34.110 1.00 20.73 ATOM 78 CD GLN A 400 22.956 32.435 33.406 1.00 21.65 ATOM 79 OE1 GLN A 400 23.658 32.400 32.380 1.00 21.68 ATOM 80 NE2 GLN A 400 22.562 33.565 33.960 1.00 22.27 ATOM 81 N ILE A 401 21.841 27.361 33.377 1.00 16.81 ATOM 82 CA ILE A 401 20.636 26.592 33.040 1.00 16.82 ATOM 83 C ILE A 401 20.351 25.523 34.097 1.00 16.51 ATOM 84 O ILE A 401 19.209 25.385 34.537 1.00 15.99 ATOM 85 CB ILE A 401 20.751 25.970 31.633 1.00 16.87 ATOM 86 CG1 ILE A 401 20.657 27.082 30.575 1.00 17.77 ATOM 87 CG2 ILE A 401 19.678 24.900 31.391 1.00 16.82 ATOM 88 CD1 ILE A 401 21.254 26.693 29.246 1.00 18.45 ATOM 89 N LEU A 402 21.377 24.778 34.507 1.00 16.93 ATOM 90 CA LEU A 402 21.199 23.721 35.510 1.00 18.63 ATOM 91 C LEU A 402 20.759 24.279 36.865 1.00 18.09 ATOM 92 O LEU A 402 19.909 23.688 37.530 1.00 17.76 ATOM 93 CB LEU A 402 22.479 22.888 35.667 1.00 20.10 ATOM 94 CG LEU A 402 22.845 22.042 34.442 1.00 22.31 ATOM 95 CD1 LEU A 402 24.204 21.351 34.572 1.00 23.64 ATOM 96 CD2 LEU A 402 21.750 21.043 34.094 1.00 23.96 ATOM 97 N GLN A 403 21.360 25.397 37.270 1.00 19.01 ATOM 98 CA GLN A 403 21.012 26.071 38.533 1.00 20.61 ATOM 99 C GLN A 403 19.548 26.514 38.547 1.00 19.25 ATOM 100 O GLN A 403 18.847 26.319 39.548 1.00 19.57 ATOM 101 CB GLN A 403 21.926 27.283 38.772 1.00 23.03 ATOM 102 CG GLN A 403 21.749 27.986 40.122 1.00 26.48 ATOM 103 CD GLN A 403 20.629 29.026 40.163 1.00 29.17 ATOM 104 OE1 GLN A 403 19.850 29.072 41.120 1.00 35.06 ATOM 105 NE2 GLN A 403 20.552 29.877 39.140 1.00 30.55 ATOM 106 N ILE A 404 19.106 27.114 37.443 1.00 18.37 ATOM 107 CA ILE A 404 17.730 27.612 37.306 1.00 17.53 ATOM 108 C ILE A 404 16.731 26.451 37.291 1.00 17.40 ATOM 109 O ILE A 404 15.710 26.497 37.995 1.00 16.99 ATOM 110 CB ILE A 404 17.592 28.557 36.092 1.00 17.38 ATOM 111 CG1 ILE A 404 18.437 29.814 36.339 1.00 16.91 ATOM 112 CG2 ILE A 404 16.136 28.977 35.872 1.00 17.56 ATOM 113 CD1 ILE A 404 18.715 30.648 35.117 1.00 17.18 ATOM 114 N HIS A 405 17.042 25.408 36.518 1.00 16.84 ATOM 115 CA HIS A 405 16.271 24.154 36.530 1.00 17.56 ATOM 116 C HIS A 405 16.082 23.596 37.944 1.00 17.80 ATOM 117 O HIS A 405 14.952 23.310 38.353 1.00 18.09 ATOM 118 CB HIS A 405 16.948 23.126 35.613 1.00 17.44 ATOM 119 CG HIS A 405 16.277 21.790 35.583 1.00 17.22 ATOM 120 ND1 HIS A 405 15.210 21.511 34.759 1.00 18.08 ATOM 121 CD2 HIS A 405 16.543 20.645 36.257 1.00 17.95 ATOM 122 CE1 HIS A 405 14.837 20.255 34.935 1.00 18.23 ATOM 123 NE2 HIS A 405 15.642 19.703 35.826 1.00 18.39 ATOM 124 N SER A 406 17.184 23.479 38.686 0.50 18.03 ATOM 125 CA SER A 406 17.157 22.967 40.056 0.50 18.71 ATOM 126 C SER A 406 16.346 23.866 40.997 0.50 18.57 ATOM 127 O SER A 406 15.539 23.367 41.795 0.50 18.55 ATOM 128 CB SER A 406 18.586 22.802 40.584 0.50 19.17 ATOM 129 OG SER A 406 18.585 22.298 41.903 0.50 19.91 ATOM 130 N TRP A 407 16.547 25.179 40.884 1.00 18.76 ATOM 131 CA TRP A 407 15.807 26.169 41.688 1.00 18.72 ATOM 132 C TRP A 407 14.289 26.042 41.454 1.00 18.93 ATOM 133 O TRP A 407 13.511 26.003 42.409 1.00 19.14 ATOM 134 CB TRP A 407 16.266 27.613 41.393 1.00 19.37 ATOM 135 CG TRP A 407 15.300 28.630 41.960 1.00 19.98 ATOM 136 CD1 TRP A 407 15.285 29.118 43.233 1.00 21.22 ATOM 137 CD2 TRP A 407 14.180 29.226 41.286 1.00 20.20 ATOM 138 NE1 TRP A 407 14.234 29.992 43.392 1.00 21.67 ATOM 139 CE2 TRP A 407 13.534 30.071 42.217 1.00 20.84 ATOM 140 CE3 TRP A 407 13.659 29.127 39.990 1.00 19.93 ATOM 141 CZ2 TRP A 407 12.404 30.831 41.884 1.00 21.00 ATOM 142 CZ3 TRP A 407 12.519 29.877 39.657 1.00 20.31 ATOM 143 CH2 TRP A 407 11.904 30.711 40.608 1.00 20.59 ATOM 144 N ALA A 408 13.897 25.983 40.181 1.00 18.87 ATOM 145 CA ALA A 408 12.480 25.896 39.784 1.00 19.34 ATOM 146 C ALA A 408 11.799 24.615 40.264 1.00 19.28 ATOM 147 O ALA A 408 10.628 24.652 40.695 1.00 18.60 ATOM 148 CB ALA A 408 12.333 26.049 38.269 1.00 19.06 ATOM 149 N LYS A 409 12.503 23.485 40.207 1.00 19.97 ATOM 150 CA LYS A 409 11.957 22.249 40.770 1.00 20.95 ATOM 151 C LYS A 409 11.746 22.401 42.273 1.00 21.65 ATOM 152 O LYS A 409 10.697 22.011 42.796 1.00 21.04 ATOM 153 CB LYS A 409 12.848 21.042 40.491 1.00 22.37 ATOM 154 CG LYS A 409 12.903 20.614 39.030 1.00 23.08 ATOM 155 CD LYS A 409 13.425 19.188 38.874 1.00 25.29 ATOM 156 CE LYS A 409 14.849 19.023 39.378 1.00 26.83 ATOM 157 NZ LYS A 409 15.249 17.595 39.320 1.00 28.48 ATOM 158 N ASP A 410 12.747 22.965 42.955 1.00 22.09 ATOM 159 CA ASP A 410 12.655 23.227 44.400 1.00 24.38 ATOM 160 C ASP A 410 11.509 24.160 44.741 1.00 23.08 ATOM 161 O ASP A 410 10.749 23.878 45.666 1.00 24.24 ATOM 162 CB ASP A 410 13.971 23.805 44.952 1.00 25.58 ATOM 163 CG ASP A 410 15.075 22.777 45.028 1.00 28.54 ATOM 164 OD1 ASP A 410 14.803 21.568 44.845 1.00 32.32 ATOM 165 OD2 ASP A 410 16.229 23.177 45.279 1.00 31.52 ATOM 166 N LYS A 411 11.373 25.253 43.990 1.00 22.48 ATOM 167 CA LYS A 411 10.297 26.224 44.232 1.00 21.70 ATOM 168 C LYS A 411 8.909 25.595 44.034 1.00 21.21 ATOM 169 O LYS A 411 8.003 25.830 44.841 1.00 20.76 ATOM 170 CB LYS A 411 10.475 27.469 43.350 1.00 21.28 ATOM 171 CG LYS A 411 9.491 28.607 43.602 1.00 22.40 ATOM 172 CD LYS A 411 9.703 29.283 44.953 1.00 22.31 ATOM 173 CE LYS A 411 8.810 30.500 45.076 1.00 22.98 ATOM 174 NZ LYS A 411 9.065 31.337 46.285 1.00 22.90 ATOM 175 N ALA A 412 8.737 24.800 42.972 1.00 20.42 ATOM 176 CA ALA A 412 7.486 24.065 42.751 1.00 19.93 ATOM 177 C ALA A 412 7.143 23.127 43.920 1.00 21.45 ATOM 178 O ALA A 412 5.996 23.089 44.382 1.00 21.25 ATOM 179 CB ALA A 412 7.558 23.259 41.450 1.00 19.82 ATOM 180 N THR A 413 8.138 22.369 44.377 1.00 21.98 ATOM 181 CA THR A 413 7.955 21.440 45.500 1.00 25.02 ATOM 182 C THR A 413 7.626 22.163 46.824 1.00 26.01 ATOM 183 O THR A 413 6.803 21.677 47.606 1.00 27.61 ATOM 184 CB THR A 413 9.197 20.547 45.684 1.00 25.43 ATOM 185 OG1 THR A 413 9.453 19.844 44.466 1.00 24.63 ATOM 186 CG2 THR A 413 9.006 19.532 46.823 1.00 26.55 ATOM 187 N ASP A 414 8.257 23.309 47.069 1.00 27.70 ATOM 188 CA ASP A 414 7.961 24.115 48.276 1.00 29.85 ATOM 189 C ASP A 414 6.532 24.671 48.266 1.00 30.01 ATOM 190 O ASP A 414 5.858 24.690 49.304 1.00 28.94 ATOM 191 CB ASP A 414 8.969 25.261 48.437 1.00 32.45 ATOM 192 CG ASP A 414 10.391 24.768 48.710 1.00 35.55 ATOM 193 OD1 ASP A 414 10.578 23.609 49.150 1.00 41.13 ATOM 194 OD2 ASP A 414 11.338 25.546 48.478 1.00 39.22 ATOM 195 N ILE A 415 6.069 25.100 47.092 1.00 29.40 ATOM 196 CA ILE A 415 4.677 25.537 46.915 1.00 29.90 ATOM 197 C ILE A 415 3.701 24.398 47.231 1.00 29.72 ATOM 198 O ILE A 415 2.733 24.602 47.976 1.00 31.54 ATOM 199 CB ILE A 415 4.446 26.123 45.497 1.00 30.21 ATOM 200 CG1 ILE A 415 5.185 27.460 45.362 1.00 29.92 ATOM 201 CG2 ILE A 415 2.959 26.322 45.201 1.00 30.51 ATOM 202 CD1 ILE A 415 5.474 27.868 43.938 1.00 30.39 ATOM 203 N TYR A 416 3.954 23.210 46.688 1.00 28.23 ATOM 204 CA TYR A 416 3.158 22.028 47.028 1.00 28.94 ATOM 205 C TYR A 416 3.166 21.749 48.541 1.00 31.59 ATOM 206 O TYR A 416 2.103 21.525 49.133 1.00 30.19 ATOM 207 CB TYR A 416 3.653 20.784 46.284 1.00 28.35 ATOM 208 CG TYR A 416 3.043 19.508 46.805 1.00 28.15 ATOM 209 CD1 TYR A 416 1.698 19.213 46.570 1.00 27.75 ATOM 210 CD2 TYR A 416 3.795 18.606 47.563 1.00 27.58 ATOM 211 CE1 TYR A 416 1.127 18.049 47.055 1.00 28.25 ATOM 212 CE2 TYR A 416 3.233 17.441 48.054 1.00 28.36 ATOM 213 CZ TYR A 416 1.900 17.168 47.804 1.00 28.18 ATOM 214 OH TYR A 416 1.339 16.015 48.288 1.00 28.88 ATOM 215 N ASN A 417 4.358 21.756 49.146 1.00 32.36 ATOM 216 CA ASN A 417 4.502 21.464 50.588 1.00 35.81 ATOM 217 C ASN A 417 3.791 22.480 51.488 1.00 38.95 ATOM 218 O ASN A 417 3.191 22.089 52.492 1.00 41.78 ATOM 219 CB ASN A 417 5.980 21.333 51.000 1.00 34.95 ATOM 220 CG ASN A 417 6.620 20.039 50.516 1.00 34.27 ATOM 221 OD1 ASN A 417 5.946 19.052 50.236 1.00 34.23 ATOM 222 ND2 ASN A 417 7.941 20.042 50.430 1.00 34.87 ATOM 223 N LYS A 418 3.837 23.761 51.121 1.00 42.63 ATOM 224 CA LYS A 418 3.130 24.820 51.858 1.00 48.46 ATOM 225 C LYS A 418 1.619 24.574 51.897 1.00 52.23 ATOM 226 O LYS A 418 1.004 24.609 52.965 1.00 52.22 ATOM 227 CB LYS A 418 3.408 26.191 51.234 1.00 51.77 ATOM 228 CG LYS A 418 2.926 27.379 52.063 1.00 56.12 ATOM 229 CD LYS A 418 2.927 28.681 51.268 1.00 59.52 ATOM 230 CE LYS A 418 4.310 29.073 50.756 1.00 61.60 ATOM 231 NZ LYS A 418 5.344 29.097 51.828 1.00 62.60 ATOM 232 N HIS A 419 1.037 24.329 50.727 1.00 55.70 ATOM 233 CA HIS A 419 -0.402 24.060 50.608 1.00 58.24 ATOM 234 C HIS A 419 -0.829 22.725 51.231 1.00 57.33 ATOM 235 O HIS A 419 -1.951 22.606 51.713 1.00 57.64 ATOM 236 CB HIS A 419 -0.863 24.129 49.139 1.00 62.03 ATOM 237 CG HIS A 419 -1.716 25.319 48.832 1.00 66.50 ATOM 238 ND1 HIS A 419 -3.093 25.281 48.905 1.00 69.08 ATOM 239 CD2 HIS A 419 -1.393 26.580 48.460 1.00 69.09 ATOM 240 CE1 HIS A 419 -3.581 26.467 48.588 1.00 71.12 ATOM 241 NE2 HIS A 419 -2.571 27.274 48.313 1.00 70.52 ATOM 242 N ASN A 420 0.060 21.735 51.217 1.00 56.16 ATOM 243 CA ASN A 420 -0.249 20.400 51.724 1.00 57.26 ATOM 244 C ASN A 420 -0.273 20.380 53.263 1.00 57.16 ATOM 245 O ASN A 420 0.755 20.216 53.925 1.00 53.06 ATOM 246 CB ASN A 420 0.762 19.389 51.164 1.00 58.01 ATOM 247 CG ASN A 420 0.450 17.954 51.553 1.00 59.82 ATOM 248 OD1 ASN A 420 -0.706 17.580 51.747 1.00 63.20 ATOM 249 ND2 ASN A 420 1.492 17.137 51.653 1.00 59.13 ATOM 250 C1 EDO A -1.670 24.251 44.996 1.00 49.56 ATOM 251 O1 EDO A -0.897 23.058 45.176 1.00 51.50 ATOM 252 C2 EDO A -0.733 25.443 44.861 1.00 48.92 ATOM 253 O2 EDO A -1.452 26.660 45.091 1.00 48.61 ATOM 254 C1 EDO A 35.158 22.481 25.676 1.00 50.19 ATOM 255 O1 EDO A 36.170 23.336 26.220 1.00 51.44 ATOM 256 C2 EDO A 34.180 22.078 26.774 1.00 49.74 ATOM 257 O2 EDO A 33.587 23.245 27.359 1.00 49.10 TER