HEADER ELECTRON TRANSPORT 31-DEC-69 5KAF TITLE RT XFEL structure of Photosystem II in the dark state at 3.0 A TITLE 2 resolution COMPND MOL_ID: 17; COMPND 2 MOLECULE: Photosystem II reaction center protein Ycf12; COMPND 3 CHAIN: Y, y; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.00 ANGSTORMS DBREF 5KAF y 1 46 UNP Q8DJI1 YCF12_THEEB 1 46 SEQRES 1 y 30 GLU VAL ILE ALA GLN LEU THR MET ILE ALA MET ILE GLY SEQRES 2 y 30 ILE ALA GLY PRO MET ILE ILE PHE LEU LEU ALA VAL ARG SEQRES 3 y 30 ARG GLY ASN LEU ATOM 1 N GLU y 17 154.129 267.083 -3.848 1.00 81.03 ATOM 2 CA GLU y 17 152.675 266.997 -3.803 1.00 79.56 ATOM 3 C GLU y 17 152.225 265.562 -4.062 1.00 70.86 ATOM 4 O GLU y 17 153.041 264.697 -4.382 1.00 61.47 ATOM 5 CB GLU y 17 152.049 267.950 -4.826 1.00 72.89 ATOM 6 CG GLU y 17 150.854 268.739 -4.307 1.00 68.06 ATOM 7 CD GLU y 17 149.546 267.984 -4.434 1.00 72.88 ATOM 8 OE1 GLU y 17 149.453 267.098 -5.309 1.00 77.58 ATOM 9 OE2 GLU y 17 148.611 268.275 -3.659 1.00 65.58 ATOM 10 N VAL y 18 150.922 265.308 -3.915 1.00 84.25 ATOM 11 CA VAL y 18 150.390 263.981 -4.202 1.00 80.89 ATOM 12 C VAL y 18 150.133 263.780 -5.690 1.00 81.16 ATOM 13 O VAL y 18 150.047 262.633 -6.146 1.00 75.47 ATOM 14 CB VAL y 18 149.104 263.720 -3.397 1.00 75.03 ATOM 15 CG1 VAL y 18 149.314 264.078 -1.934 1.00 78.35 ATOM 16 CG2 VAL y 18 147.935 264.501 -3.979 1.00 82.86 ATOM 17 N ILE y 19 150.006 264.863 -6.461 1.00 73.46 ATOM 18 CA ILE y 19 149.902 264.730 -7.910 1.00 73.27 ATOM 19 C ILE y 19 151.240 264.307 -8.498 1.00 75.98 ATOM 20 O ILE y 19 151.289 263.536 -9.465 1.00 74.71 ATOM 21 CB ILE y 19 149.393 266.044 -8.532 1.00 73.82 ATOM 22 CG1 ILE y 19 147.951 266.315 -8.100 1.00 66.03 ATOM 23 CG2 ILE y 19 149.491 266.001 -10.051 1.00 71.25 ATOM 24 CD1 ILE y 19 147.336 267.532 -8.756 1.00 54.87 ATOM 25 N ALA y 20 152.345 264.781 -7.917 1.00 79.99 ATOM 26 CA ALA y 20 153.672 264.376 -8.360 1.00 72.64 ATOM 27 C ALA y 20 153.949 262.898 -8.120 1.00 76.80 ATOM 28 O ALA y 20 154.927 262.377 -8.665 1.00 78.16 ATOM 29 CB ALA y 20 154.737 265.226 -7.664 1.00 71.27 ATOM 30 N GLN y 21 153.126 262.218 -7.322 1.00 79.07 ATOM 31 CA GLN y 21 153.251 260.779 -7.123 1.00 68.25 ATOM 32 C GLN y 21 152.409 259.994 -8.123 1.00 70.96 ATOM 33 O GLN y 21 152.913 259.073 -8.774 1.00 72.99 ATOM 34 CB GLN y 21 152.851 260.401 -5.693 1.00 64.16 ATOM 35 CG GLN y 21 154.009 260.354 -4.711 1.00 67.56 ATOM 36 CD GLN y 21 153.566 260.582 -3.280 1.00 68.40 ATOM 37 OE1 GLN y 21 152.458 260.209 -2.894 1.00 73.31 ATOM 38 NE2 GLN y 21 154.431 261.198 -2.483 1.00 67.24 ATOM 39 N LEU y 22 151.125 260.345 -8.251 1.00 69.97 ATOM 40 CA LEU y 22 150.253 259.654 -9.196 1.00 66.75 ATOM 41 C LEU y 22 150.753 259.794 -10.627 1.00 71.35 ATOM 42 O LEU y 22 150.516 258.907 -11.456 1.00 68.94 ATOM 43 CB LEU y 22 148.825 260.187 -9.082 1.00 64.65 ATOM 44 CG LEU y 22 148.096 259.962 -7.756 1.00 69.24 ATOM 45 CD1 LEU y 22 146.686 260.530 -7.820 1.00 46.77 ATOM 46 CD2 LEU y 22 148.066 258.483 -7.406 1.00 58.95 ATOM 47 N THR y 23 151.439 260.895 -10.937 1.00 73.59 ATOM 48 CA THR y 23 151.984 261.073 -12.278 1.00 79.48 ATOM 49 C THR y 23 153.103 260.076 -12.557 1.00 79.70 ATOM 50 O THR y 23 153.211 259.552 -13.672 1.00 76.75 ATOM 51 CB THR y 23 152.487 262.506 -12.454 1.00 80.44 ATOM 52 OG1 THR y 23 151.503 263.424 -11.960 1.00 80.19 ATOM 53 CG2 THR y 23 152.756 262.802 -13.922 1.00 77.60 ATOM 54 N MET y 24 153.939 259.796 -11.555 1.00 72.95 ATOM 55 CA MET y 24 155.048 258.867 -11.747 1.00 71.28 ATOM 56 C MET y 24 154.545 257.441 -11.940 1.00 76.54 ATOM 57 O MET y 24 154.860 256.788 -12.942 1.00 75.67 ATOM 58 CB MET y 24 156.009 258.941 -10.558 1.00 72.96 ATOM 59 CG MET y 24 156.616 260.312 -10.320 1.00 75.84 ATOM 60 SD MET y 24 157.854 260.772 -11.547 1.00101.12 ATOM 61 CE MET y 24 157.295 262.414 -11.989 1.00 79.96 ATOM 62 N ILE y 25 153.753 256.942 -10.985 1.00 78.25 ATOM 63 CA ILE y 25 153.331 255.543 -11.011 1.00 73.00 ATOM 64 C ILE y 25 152.514 255.237 -12.260 1.00 74.47 ATOM 65 O ILE y 25 152.567 254.119 -12.787 1.00 74.59 ATOM 66 CB ILE y 25 152.557 255.199 -9.721 1.00 73.26 ATOM 67 CG1 ILE y 25 152.149 253.724 -9.712 1.00 76.19 ATOM 68 CG2 ILE y 25 151.343 256.103 -9.557 1.00 67.16 ATOM 69 CD1 ILE y 25 153.318 252.767 -9.802 1.00 73.58 ATOM 70 N ALA y 26 151.757 256.216 -12.763 1.00 68.80 ATOM 71 CA ALA y 26 151.046 256.015 -14.020 1.00 65.96 ATOM 72 C ALA y 26 152.018 255.920 -15.190 1.00 68.32 ATOM 73 O ALA y 26 151.852 255.074 -16.076 1.00 67.83 ATOM 74 CB ALA y 26 150.041 257.144 -14.242 1.00 67.02 ATOM 75 N MET y 27 153.044 256.775 -15.206 1.00 64.93 ATOM 76 CA MET y 27 154.050 256.714 -16.263 1.00 66.24 ATOM 77 C MET y 27 154.900 255.456 -16.139 1.00 64.55 ATOM 78 O MET y 27 155.087 254.722 -17.117 1.00 67.07 ATOM 79 CB MET y 27 154.932 257.960 -16.216 1.00 71.38 ATOM 80 CG MET y 27 154.256 259.224 -16.708 1.00 68.72 ATOM 81 SD MET y 27 154.890 259.766 -18.301 1.00 75.73 ATOM 82 CE MET y 27 156.595 260.085 -17.872 1.00 68.45 ATOM 83 N ILE y 28 155.431 255.196 -14.942 1.00 60.98 ATOM 84 CA ILE y 28 156.257 254.010 -14.730 1.00 68.50 ATOM 85 C ILE y 28 155.434 252.743 -14.907 1.00 69.05 ATOM 86 O ILE y 28 155.966 251.690 -15.280 1.00 68.00 ATOM 87 CB ILE y 28 156.926 254.073 -13.341 1.00 63.90 ATOM 88 CG1 ILE y 28 157.684 255.393 -13.175 1.00 65.57 ATOM 89 CG2 ILE y 28 157.871 252.898 -13.135 1.00 63.96 ATOM 90 CD1 ILE y 28 158.339 255.558 -11.822 1.00 63.10 ATOM 91 N GLY y 29 154.127 252.823 -14.669 1.00 65.19 ATOM 92 CA GLY y 29 153.256 251.675 -14.818 1.00 72.81 ATOM 93 C GLY y 29 152.912 251.342 -16.257 1.00 74.92 ATOM 94 O GLY y 29 152.903 250.170 -16.645 1.00 67.61 ATOM 95 N ILE y 30 152.632 252.368 -17.061 1.00 81.37 ATOM 96 CA ILE y 30 152.218 252.182 -18.447 1.00 80.60 ATOM 97 C ILE y 30 153.405 251.801 -19.324 1.00 69.82 ATOM 98 O ILE y 30 153.239 251.500 -20.511 1.00 68.93 ATOM 99 CB ILE y 30 151.522 253.447 -18.981 1.00 77.57 ATOM 100 CG1 ILE y 30 150.584 253.099 -20.144 1.00 81.42 ATOM 101 CG2 ILE y 30 152.549 254.492 -19.402 1.00 71.31 ATOM 102 CD1 ILE y 30 149.549 252.045 -19.799 1.00 77.74 ATOM 103 N ALA y 31 154.608 251.807 -18.749 1.00 68.92 ATOM 104 CA ALA y 31 155.785 251.390 -19.503 1.00 64.53 ATOM 105 C ALA y 31 155.722 249.916 -19.886 1.00 64.47 ATOM 106 O ALA y 31 156.285 249.518 -20.913 1.00 63.16 ATOM 107 CB ALA y 31 157.053 251.667 -18.697 1.00 71.58 ATOM 108 N GLY y 32 155.046 249.097 -19.084 1.00 70.85 ATOM 109 CA GLY y 32 154.948 247.678 -19.331 1.00 60.06 ATOM 110 C GLY y 32 154.176 247.323 -20.588 1.00 59.42 ATOM 111 O GLY y 32 154.736 246.794 -21.555 1.00 56.95 ATOM 112 N PRO y 33 152.866 247.591 -20.595 1.00 63.23 ATOM 113 CA PRO y 33 152.058 247.272 -21.787 1.00 58.70 ATOM 114 C PRO y 33 152.520 247.976 -23.051 1.00 60.67 ATOM 115 O PRO y 33 152.136 247.556 -24.150 1.00 57.37 ATOM 116 CB PRO y 33 150.646 247.719 -21.385 1.00 49.84 ATOM 117 CG PRO y 33 150.646 247.669 -19.895 1.00 58.40 ATOM 118 CD PRO y 33 152.032 248.069 -19.479 1.00 63.10 ATOM 119 N MET y 34 153.327 249.032 -22.935 1.00 66.64 ATOM 120 CA MET y 34 153.846 249.703 -24.122 1.00 62.03 ATOM 121 C MET y 34 154.792 248.792 -24.895 1.00 58.12 ATOM 122 O MET y 34 154.704 248.688 -26.123 1.00 52.36 ATOM 123 CB MET y 34 154.551 251.000 -23.722 1.00 61.62 ATOM 124 CG MET y 34 154.848 251.947 -24.880 1.00 59.77 ATOM 125 SD MET y 34 153.523 253.128 -25.216 1.00 91.75 ATOM 126 CE MET y 34 152.419 252.164 -26.246 1.00 57.35 ATOM 127 N ILE y 35 155.701 248.118 -24.186 1.00 56.98 ATOM 128 CA ILE y 35 156.660 247.231 -24.840 1.00 55.09 ATOM 129 C ILE y 35 155.939 246.094 -25.550 1.00 57.18 ATOM 130 O ILE y 35 156.322 245.687 -26.654 1.00 55.60 ATOM 131 CB ILE y 35 157.679 246.703 -23.813 1.00 47.90 ATOM 132 CG1 ILE y 35 158.335 247.868 -23.070 1.00 48.79 ATOM 133 CG2 ILE y 35 158.728 245.836 -24.492 1.00 53.91 ATOM 134 CD1 ILE y 35 159.221 247.438 -21.924 1.00 52.84 ATOM 135 N ILE y 36 154.881 245.564 -24.932 1.00 56.07 ATOM 136 CA ILE y 36 154.117 244.494 -25.563 1.00 46.84 ATOM 137 C ILE y 36 153.327 245.028 -26.751 1.00 51.20 ATOM 138 O ILE y 36 153.048 244.289 -27.703 1.00 58.70 ATOM 139 CB ILE y 36 153.198 243.819 -24.528 1.00 49.31 ATOM 140 CG1 ILE y 36 153.948 243.592 -23.214 1.00 42.93 ATOM 141 CG2 ILE y 36 152.673 242.501 -25.064 1.00 48.51 ATOM 142 CD1 ILE y 36 155.082 242.596 -23.318 1.00 35.66 ATOM 143 N PHE y 37 152.961 246.310 -26.724 1.00 52.84 ATOM 144 CA PHE y 37 152.207 246.897 -27.826 1.00 55.72 ATOM 145 C PHE y 37 153.105 247.207 -29.018 1.00 52.79 ATOM 146 O PHE y 37 152.712 246.982 -30.168 1.00 53.78 ATOM 147 CB PHE y 37 151.489 248.161 -27.353 1.00 54.71 ATOM 148 CG PHE y 37 150.557 248.750 -28.373 1.00 53.44 ATOM 149 CD1 PHE y 37 149.311 248.189 -28.598 1.00 56.28 ATOM 150 CD2 PHE y 37 150.925 249.869 -29.103 1.00 55.43 ATOM 151 CE1 PHE y 37 148.449 248.730 -29.535 1.00 63.58 ATOM 152 CE2 PHE y 37 150.068 250.415 -30.041 1.00 60.39 ATOM 153 CZ PHE y 37 148.829 249.845 -30.257 1.00 62.11 ATOM 154 N LEU y 38 154.311 247.723 -28.764 1.00 50.19 ATOM 155 CA LEU y 38 155.228 248.027 -29.859 1.00 56.78 ATOM 156 C LEU y 38 155.729 246.755 -30.531 1.00 63.06 ATOM 157 O LEU y 38 155.790 246.682 -31.764 1.00 64.67 ATOM 158 CB LEU y 38 156.403 248.862 -29.347 1.00 54.40 ATOM 159 CG LEU y 38 156.058 250.143 -28.584 1.00 52.41 ATOM 160 CD1 LEU y 38 157.321 250.910 -28.222 1.00 46.87 ATOM 161 CD2 LEU y 38 155.107 251.014 -29.390 1.00 45.45 ATOM 162 N LEU y 39 156.089 245.742 -29.741 1.00 58.10 ATOM 163 CA LEU y 39 156.534 244.471 -30.297 1.00 53.65 ATOM 164 C LEU y 39 155.421 243.718 -31.013 1.00 57.41 ATOM 165 O LEU y 39 155.713 242.761 -31.738 1.00 59.14 ATOM 166 CB LEU y 39 157.123 243.593 -29.191 1.00 55.04 ATOM 167 CG LEU y 39 158.592 243.839 -28.841 1.00 53.75 ATOM 168 CD1 LEU y 39 159.038 242.907 -27.727 1.00 47.55 ATOM 169 CD2 LEU y 39 159.469 243.665 -30.072 1.00 55.42 ATOM 170 N ALA y 40 154.163 244.118 -30.830 1.00 63.95 ATOM 171 CA ALA y 40 153.065 243.466 -31.533 1.00 59.47 ATOM 172 C ALA y 40 152.990 243.923 -32.986 1.00 69.78 ATOM 173 O ALA y 40 152.979 243.097 -33.905 1.00 70.05 ATOM 174 CB ALA y 40 151.743 243.740 -30.814 1.00 50.95 ATOM 175 N VAL y 41 152.943 245.239 -33.209 1.00 75.92 ATOM 176 CA VAL y 41 152.833 245.758 -34.569 1.00 61.77 ATOM 177 C VAL y 41 154.147 245.591 -35.321 1.00 67.07 ATOM 178 O VAL y 41 154.157 245.504 -36.556 1.00 67.59 ATOM 179 CB VAL y 41 152.382 247.230 -34.538 1.00 48.01 ATOM 180 CG1 VAL y 41 151.926 247.681 -35.919 1.00 57.46 ATOM 181 CG2 VAL y 41 151.277 247.427 -33.512 1.00 50.54 ATOM 182 N ARG y 42 155.269 245.535 -34.606 1.00 70.55 ATOM 183 CA ARG y 42 156.576 245.406 -35.237 1.00 74.55 ATOM 184 C ARG y 42 156.902 243.982 -35.665 1.00 84.98 ATOM 185 O ARG y 42 158.012 243.751 -36.157 1.00 93.71 ATOM 186 CB ARG y 42 157.672 245.908 -34.291 1.00 69.72 ATOM 187 CG ARG y 42 158.044 247.372 -34.469 1.00 75.80 ATOM 188 CD ARG y 42 159.111 247.794 -33.467 1.00 83.75 ATOM 189 NE ARG y 42 160.453 247.375 -33.866 1.00 89.54 ATOM 190 CZ ARG y 42 161.361 248.188 -34.398 1.00 86.72 ATOM 191 NH1 ARG y 42 161.073 249.466 -34.596 1.00 94.20 ATOM 192 NH2 ARG y 42 162.559 247.726 -34.732 1.00 85.78 ATOM 193 N ARG y 43 155.978 243.032 -35.501 1.00 77.86 ATOM 194 CA ARG y 43 156.242 241.614 -35.748 1.00 78.06 ATOM 195 C ARG y 43 157.404 241.141 -34.867 1.00 74.74 ATOM 196 O ARG y 43 158.436 240.653 -35.332 1.00 77.67 ATOM 197 CB ARG y 43 156.497 241.361 -37.244 1.00 71.43 ATOM 198 CG ARG y 43 156.780 239.918 -37.665 1.00 68.98 ATOM 199 CD ARG y 43 155.847 238.917 -37.009 1.00 81.44 ATOM 200 NE ARG y 43 156.373 237.559 -37.124 1.00 83.48 ATOM 201 CZ ARG y 43 156.001 236.542 -36.353 1.00 74.47 ATOM 202 NH1 ARG y 43 155.098 236.723 -35.400 1.00 65.27 ATOM 203 NH2 ARG y 43 156.537 235.342 -36.534 1.00 80.70 ATOM 204 N GLY y 44 157.215 241.318 -33.558 1.00 68.89 ATOM 205 CA GLY y 44 158.257 241.018 -32.603 1.00 61.01 ATOM 206 C GLY y 44 158.183 239.604 -32.061 1.00 61.46 ATOM 207 O GLY y 44 157.130 238.970 -32.043 1.00 67.06 ATOM 208 N ASN y 45 159.336 239.116 -31.606 1.00 56.51 ATOM 209 CA ASN y 45 159.448 237.759 -31.087 1.00 61.24 ATOM 210 C ASN y 45 158.823 237.653 -29.702 1.00 57.07 ATOM 211 O ASN y 45 159.535 237.544 -28.699 1.00 59.54 ATOM 212 CB ASN y 45 160.916 237.328 -31.047 1.00 67.88 ATOM 213 CG ASN y 45 161.082 235.825 -30.963 1.00 71.46 ATOM 214 OD1 ASN y 45 160.181 235.068 -31.326 1.00 70.88 ATOM 215 ND2 ASN y 45 162.239 235.382 -30.483 1.00 60.54 ATOM 216 N LEU y 46 157.495 237.685 -29.637 1.00 57.17 ATOM 217 CA LEU y 46 156.786 237.575 -28.366 1.00 59.42 ATOM 218 C LEU y 46 156.614 236.115 -27.959 1.00 57.61 ATOM 219 O LEU y 46 156.469 235.798 -26.779 1.00 49.03 ATOM 220 CB LEU y 46 155.421 238.262 -28.450 1.00 47.55 ATOM 221 CG LEU y 46 155.428 239.790 -28.534 1.00 44.73 ATOM 222 CD1 LEU y 46 154.011 240.328 -28.663 1.00 46.10 ATOM 223 CD2 LEU y 46 156.123 240.388 -27.323 1.00 39.80 ATOM 224 OXT LEU y 46 156.616 235.218 -28.802 1.00 58.89 TER