HEADER OXIDOREDUCTASE 31-DEC-69 5LD5 TITLE Crystal structure of a bacterial dehydrogenase at 2.19 Angstroms TITLE 2 resolution COMPND MOL_ID: 1; COMPND 2 MOLECULE: Glyceraldehyde-3-phosphate dehydrogenase; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.2.1.-; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.19 ANGSTORMS DBREF 5LD5 B 1 356 UNP F1T6A5 F1T6A5_9ACT 1 356 SEQRES 1 B 152 MET ALA VAL LYS VAL ALA ILE ASN GLY PHE GLY ARG ILE SEQRES 2 B 152 GLY ARG LEU ALA PHE ARG GLN MET PHE GLY HIS GLU GLY SEQRES 3 B 152 SER GLU ILE VAL ALA ILE ASN ASP LEU THR ASP PRO LYS SEQRES 4 B 152 MET LEU ALA ASN LEU LEU LYS TYR ASP SER SER GLN GLY SEQRES 5 B 152 ASN TYR ALA ARG ASN HIS SER VAL VAL ALA GLY GLU ASP SEQRES 6 B 152 SER ILE THR VAL ASP GLY LYS THR ILE LYS ILE TYR LYS SEQRES 7 B 152 GLU ALA ASP ALA HIS ASN LEU PRO TRP GLY GLU LEU ASN SEQRES 8 B 152 VAL ASP VAL VAL LEU GLU CYS THR GLY PHE TYR THR SER SEQRES 9 B 152 LYS ALA LYS ALA GLN ALA HIS ILE ASP ALA GLY ALA LYS SEQRES 10 B 152 LYS VAL VAL ILE SER ALA PRO ALA GLY LYS ASP LEU PRO SEQRES 11 B 152 THR ILE VAL TYR ASN VAL ASN HIS GLU ILE LEU THR LYS SEQRES 12 B 152 ASP ASP ASN ILE ILE SER ALA ALA SER SEQRES 1 B 20 ASN GLU ASN SER TYR THR SER GLN MET VAL ARG THR ILE SEQRES 2 B 20 LYS TYR PHE GLU LYS PHE VAL ATOM 1 N ASN B 338 -16.410 -6.983 11.343 1.00 33.86 ATOM 2 CA ASN B 338 -15.793 -6.614 10.069 1.00 35.50 ATOM 3 C ASN B 338 -16.294 -7.446 8.916 1.00 35.35 ATOM 4 O ASN B 338 -16.298 -6.976 7.796 1.00 47.69 ATOM 5 CB ASN B 338 -14.256 -6.688 10.137 1.00 33.17 ATOM 6 CG ASN B 338 -13.753 -7.948 10.797 1.00 35.67 ATOM 7 OD1 ASN B 338 -13.351 -8.906 10.124 1.00 42.08 ATOM 8 ND2 ASN B 338 -13.761 -7.958 12.126 1.00 32.19 ATOM 9 N GLU B 339 -16.759 -8.664 9.179 1.00 37.02 ATOM 10 CA GLU B 339 -17.316 -9.497 8.113 1.00 36.64 ATOM 11 C GLU B 339 -18.792 -9.181 7.854 1.00 43.63 ATOM 12 O GLU B 339 -19.162 -8.707 6.766 1.00 45.46 ATOM 13 CB GLU B 339 -17.149 -10.995 8.449 1.00 41.03 ATOM 14 CG GLU B 339 -15.709 -11.499 8.380 1.00 40.66 ATOM 15 CD GLU B 339 -15.540 -12.992 8.759 1.00 50.39 ATOM 16 OE1 GLU B 339 -16.485 -13.627 9.307 1.00 44.36 ATOM 17 OE2 GLU B 339 -14.435 -13.529 8.503 1.00 50.93 ATOM 18 N ASN B 340 -19.642 -9.447 8.843 1.00 42.00 ATOM 19 CA ASN B 340 -21.080 -9.350 8.618 1.00 39.52 ATOM 20 C ASN B 340 -21.667 -7.936 8.736 1.00 40.34 ATOM 21 O ASN B 340 -22.647 -7.623 8.059 1.00 42.14 ATOM 22 CB ASN B 340 -21.832 -10.280 9.566 1.00 39.56 ATOM 23 CG ASN B 340 -23.245 -10.576 9.078 1.00 50.22 ATOM 24 OD1 ASN B 340 -23.445 -11.096 7.979 1.00 47.02 ATOM 25 ND2 ASN B 340 -24.237 -10.202 9.883 1.00 57.84 ATOM 26 N SER B 341 -21.069 -7.083 9.565 1.00 38.89 ATOM 27 CA SER B 341 -21.490 -5.682 9.609 1.00 39.34 ATOM 28 C SER B 341 -21.269 -5.055 8.258 1.00 40.18 ATOM 29 O SER B 341 -22.151 -4.401 7.725 1.00 41.50 ATOM 30 CB SER B 341 -20.730 -4.873 10.672 1.00 39.29 ATOM 31 OG SER B 341 -21.105 -5.245 11.988 1.00 44.95 ATOM 32 N TYR B 342 -20.084 -5.261 7.704 1.00 39.51 ATOM 33 CA TYR B 342 -19.775 -4.747 6.384 1.00 41.05 ATOM 34 C TYR B 342 -20.740 -5.301 5.335 1.00 42.03 ATOM 35 O TYR B 342 -21.252 -4.570 4.490 1.00 43.32 ATOM 36 CB TYR B 342 -18.339 -5.095 5.991 1.00 39.41 ATOM 37 CG TYR B 342 -17.968 -4.578 4.613 1.00 42.12 ATOM 38 CD1 TYR B 342 -17.573 -3.252 4.427 1.00 40.34 ATOM 39 CD2 TYR B 342 -18.058 -5.398 3.495 1.00 41.97 ATOM 40 CE1 TYR B 342 -17.239 -2.765 3.165 1.00 44.31 ATOM 41 CE2 TYR B 342 -17.732 -4.921 2.224 1.00 43.08 ATOM 42 CZ TYR B 342 -17.317 -3.609 2.065 1.00 45.78 ATOM 43 OH TYR B 342 -16.997 -3.137 0.808 1.00 46.17 ATOM 44 N THR B 343 -20.996 -6.597 5.409 1.00 42.09 ATOM 45 CA THR B 343 -21.821 -7.275 4.424 1.00 45.00 ATOM 46 C THR B 343 -23.251 -6.733 4.438 1.00 45.49 ATOM 47 O THR B 343 -23.874 -6.563 3.391 1.00 46.79 ATOM 48 CB THR B 343 -21.838 -8.802 4.688 1.00 44.61 ATOM 49 OG1 THR B 343 -20.501 -9.319 4.631 1.00 42.18 ATOM 50 CG2 THR B 343 -22.748 -9.535 3.707 1.00 45.21 ATOM 51 N SER B 344 -23.768 -6.492 5.637 1.00 44.66 ATOM 52 CA SER B 344 -25.128 -6.005 5.791 1.00 48.37 ATOM 53 C SER B 344 -25.286 -4.626 5.167 1.00 47.33 ATOM 54 O SER B 344 -26.325 -4.320 4.583 1.00 48.60 ATOM 55 CB SER B 344 -25.528 -5.969 7.264 1.00 51.25 ATOM 56 OG SER B 344 -25.511 -7.274 7.817 1.00 48.43 ATOM 57 N GLN B 345 -24.253 -3.799 5.304 1.00 45.72 ATOM 58 CA GLN B 345 -24.225 -2.481 4.687 1.00 46.42 ATOM 59 C GLN B 345 -24.161 -2.619 3.165 1.00 49.04 ATOM 60 O GLN B 345 -24.882 -1.930 2.433 1.00 51.41 ATOM 61 CB GLN B 345 -23.032 -1.681 5.211 1.00 44.85 ATOM 62 CG GLN B 345 -23.231 -1.104 6.603 1.00 43.96 ATOM 63 CD GLN B 345 -24.076 0.153 6.590 1.00 45.08 ATOM 64 OE1 GLN B 345 -25.270 0.130 6.898 1.00 46.09 ATOM 65 NE2 GLN B 345 -23.449 1.268 6.236 1.00 44.99 ATOM 66 N MET B 346 -23.295 -3.508 2.693 1.00 47.16 ATOM 67 CA MET B 346 -23.108 -3.689 1.254 1.00 48.36 ATOM 68 C MET B 346 -24.349 -4.263 0.580 1.00 50.30 ATOM 69 O MET B 346 -24.630 -3.965 -0.572 1.00 53.14 ATOM 70 CB MET B 346 -21.897 -4.579 0.981 1.00 48.88 ATOM 71 CG MET B 346 -21.659 -4.881 -0.494 1.00 48.54 ATOM 72 SD MET B 346 -20.182 -5.902 -0.694 1.00 64.81 ATOM 73 CE MET B 346 -20.196 -6.159 -2.470 1.00 62.14 ATOM 74 N VAL B 347 -25.076 -5.118 1.291 1.00 51.87 ATOM 75 CA VAL B 347 -26.305 -5.689 0.761 1.00 52.18 ATOM 76 C VAL B 347 -27.383 -4.603 0.703 1.00 53.63 ATOM 77 O VAL B 347 -28.153 -4.536 -0.249 1.00 56.36 ATOM 78 CB VAL B 347 -26.780 -6.889 1.604 1.00 51.80 ATOM 79 CG1 VAL B 347 -28.223 -7.266 1.263 1.00 53.89 ATOM 80 CG2 VAL B 347 -25.852 -8.075 1.382 1.00 50.87 ATOM 81 N ARG B 348 -27.430 -3.745 1.716 1.00 52.74 ATOM 82 CA ARG B 348 -28.333 -2.598 1.684 1.00 54.03 ATOM 83 C ARG B 348 -28.025 -1.688 0.490 1.00 57.10 ATOM 84 O ARG B 348 -28.938 -1.183 -0.186 1.00 57.01 ATOM 85 CB ARG B 348 -28.240 -1.797 2.984 1.00 52.73 ATOM 86 CG ARG B 348 -28.759 -2.529 4.207 1.00 52.09 ATOM 87 CD ARG B 348 -28.688 -1.658 5.452 1.00 50.98 ATOM 88 NE ARG B 348 -29.015 -2.434 6.644 1.00 57.03 ATOM 89 CZ ARG B 348 -28.139 -2.790 7.574 1.00 53.67 ATOM 90 NH1 ARG B 348 -26.867 -2.414 7.483 1.00 54.11 ATOM 91 NH2 ARG B 348 -28.543 -3.507 8.608 1.00 57.51 ATOM 92 N THR B 349 -26.740 -1.470 0.235 1.00 53.80 ATOM 93 CA THR B 349 -26.340 -0.631 -0.889 1.00 54.72 ATOM 94 C THR B 349 -26.717 -1.256 -2.227 1.00 56.56 ATOM 95 O THR B 349 -27.214 -0.572 -3.109 1.00 64.28 ATOM 96 CB THR B 349 -24.826 -0.336 -0.862 1.00 53.02 ATOM 97 OG1 THR B 349 -24.554 0.621 0.173 1.00 52.68 ATOM 98 CG2 THR B 349 -24.360 0.242 -2.198 1.00 54.14 ATOM 99 N ILE B 350 -26.488 -2.556 -2.369 1.00 56.22 ATOM 100 CA ILE B 350 -26.815 -3.268 -3.600 1.00 57.95 ATOM 101 C ILE B 350 -28.306 -3.233 -3.907 1.00 63.46 ATOM 102 O ILE B 350 -28.708 -3.029 -5.056 1.00 62.90 ATOM 103 CB ILE B 350 -26.352 -4.734 -3.535 1.00 57.12 ATOM 104 CG1 ILE B 350 -24.827 -4.796 -3.513 1.00 58.62 ATOM 105 CG2 ILE B 350 -26.906 -5.519 -4.715 1.00 59.14 ATOM 106 CD1 ILE B 350 -24.275 -6.111 -3.027 1.00 60.27 ATOM 107 N LYS B 351 -29.122 -3.441 -2.878 1.00 62.14 ATOM 108 CA LYS B 351 -30.572 -3.439 -3.042 1.00 67.43 ATOM 109 C LYS B 351 -31.086 -2.070 -3.482 1.00 68.71 ATOM 110 O LYS B 351 -32.026 -1.978 -4.270 1.00 70.62 ATOM 111 CB LYS B 351 -31.256 -3.895 -1.746 1.00 66.79 ATOM 112 CG LYS B 351 -31.105 -5.401 -1.488 1.00 61.37 ATOM 113 CD LYS B 351 -31.719 -5.839 -0.163 1.00 64.07 ATOM 114 CE LYS B 351 -31.573 -7.347 0.030 1.00 70.68 ATOM 115 NZ LYS B 351 -32.098 -7.831 1.337 1.00 71.52 ATOM 116 N TYR B 352 -30.455 -1.010 -2.993 1.00 66.53 ATOM 117 CA TYR B 352 -30.820 0.341 -3.401 1.00 73.96 ATOM 118 C TYR B 352 -30.351 0.587 -4.830 1.00 78.53 ATOM 119 O TYR B 352 -31.068 1.176 -5.645 1.00 79.20 ATOM 120 CB TYR B 352 -30.206 1.371 -2.453 1.00 70.02 ATOM 121 CG TYR B 352 -30.513 2.807 -2.805 1.00 64.68 ATOM 122 CD1 TYR B 352 -31.656 3.423 -2.318 1.00 66.54 ATOM 123 CD2 TYR B 352 -29.648 3.553 -3.596 1.00 63.13 ATOM 124 CE1 TYR B 352 -31.941 4.741 -2.614 1.00 72.94 ATOM 125 CE2 TYR B 352 -29.923 4.875 -3.902 1.00 68.54 ATOM 126 CZ TYR B 352 -31.075 5.462 -3.407 1.00 73.79 ATOM 127 OH TYR B 352 -31.371 6.772 -3.693 1.00 78.13 ATOM 128 N PHE B 353 -29.145 0.105 -5.120 1.00 77.49 ATOM 129 CA PHE B 353 -28.509 0.262 -6.423 1.00 76.97 ATOM 130 C PHE B 353 -29.328 -0.372 -7.553 1.00 76.22 ATOM 131 O PHE B 353 -29.287 0.092 -8.694 1.00 77.25 ATOM 132 CB PHE B 353 -27.114 -0.366 -6.376 1.00 75.61 ATOM 133 CG PHE B 353 -26.201 0.081 -7.475 1.00 75.94 ATOM 134 CD1 PHE B 353 -26.189 1.396 -7.892 1.00 77.63 ATOM 135 CD2 PHE B 353 -25.359 -0.824 -8.099 1.00 75.45 ATOM 136 CE1 PHE B 353 -25.343 1.807 -8.905 1.00 78.67 ATOM 137 CE2 PHE B 353 -24.516 -0.419 -9.117 1.00 78.01 ATOM 138 CZ PHE B 353 -24.507 0.900 -9.518 1.00 78.73 ATOM 139 N GLU B 354 -30.092 -1.410 -7.213 1.00 76.50 ATOM 140 CA GLU B 354 -30.864 -2.194 -8.184 1.00 75.43 ATOM 141 C GLU B 354 -31.974 -1.382 -8.850 1.00 76.39 ATOM 142 O GLU B 354 -32.464 -1.750 -9.915 1.00 83.51 ATOM 143 CB GLU B 354 -31.481 -3.424 -7.504 1.00 77.78 ATOM 144 CG GLU B 354 -30.538 -4.611 -7.323 1.00 83.41 ATOM 145 CD GLU B 354 -31.170 -5.749 -6.516 1.00 89.22 ATOM 146 OE1 GLU B 354 -30.479 -6.761 -6.250 1.00 85.14 ATOM 147 OE2 GLU B 354 -32.358 -5.627 -6.143 1.00 93.58 ATOM 148 N LYS B 355 -32.373 -0.285 -8.217 1.00 75.19 ATOM 149 CA LYS B 355 -33.401 0.597 -8.771 1.00 86.47 ATOM 150 C LYS B 355 -32.990 1.160 -10.137 1.00 89.87 ATOM 151 O LYS B 355 -33.838 1.518 -10.958 1.00 92.09 ATOM 152 CB LYS B 355 -33.696 1.741 -7.796 1.00 88.00 ATOM 153 CG LYS B 355 -32.634 2.827 -7.792 1.00 87.43 ATOM 154 CD LYS B 355 -32.925 3.911 -6.770 1.00 87.67 ATOM 155 CE LYS B 355 -34.290 4.526 -6.976 1.00 92.23 ATOM 156 NZ LYS B 355 -34.474 5.647 -6.021 1.00 92.63 ATOM 157 N PHE B 356 -31.682 1.251 -10.357 1.00 88.02 ATOM 158 CA PHE B 356 -31.129 1.798 -11.589 1.00 87.04 ATOM 159 C PHE B 356 -31.013 0.736 -12.684 1.00 90.85 ATOM 160 O PHE B 356 -30.523 1.014 -13.779 1.00 97.30 ATOM 161 CB PHE B 356 -29.771 2.443 -11.309 1.00 85.66 ATOM 162 CG PHE B 356 -29.849 3.626 -10.373 1.00 88.88 ATOM 163 CD1 PHE B 356 -30.492 4.794 -10.761 1.00 91.88 ATOM 164 CD2 PHE B 356 -29.287 3.571 -9.106 1.00 86.14 ATOM 165 CE1 PHE B 356 -30.570 5.885 -9.903 1.00 87.58 ATOM 166 CE2 PHE B 356 -29.364 4.658 -8.245 1.00 85.30 ATOM 167 CZ PHE B 356 -30.005 5.816 -8.647 1.00 86.06 ATOM 168 N VAL B 357 -31.461 -0.480 -12.378 1.00 87.36 ATOM 169 CA VAL B 357 -31.470 -1.574 -13.347 1.00 86.78 ATOM 170 C VAL B 357 -32.879 -1.797 -13.882 1.00 90.16 ATOM 171 O VAL B 357 -33.240 -1.281 -14.940 1.00 96.14 ATOM 172 CB VAL B 357 -30.955 -2.901 -12.731 1.00 92.45 ATOM 173 CG1 VAL B 357 -31.379 -4.089 -13.586 1.00 89.73 ATOM 174 CG2 VAL B 357 -29.442 -2.868 -12.561 1.00 89.41 ATOM 175 PA NAD B -10.990 -14.206 0.938 1.00 45.79 ATOM 176 O1A NAD B -9.587 -14.719 0.730 1.00 49.77 ATOM 177 O2A NAD B -11.668 -14.899 2.094 1.00 48.83 ATOM 178 O5B NAD B -11.849 -14.474 -0.386 1.00 51.63 ATOM 179 C5B NAD B -11.438 -13.999 -1.665 1.00 50.24 ATOM 180 C4B NAD B -12.010 -14.990 -2.666 1.00 52.51 ATOM 181 O4B NAD B -11.740 -14.578 -4.006 1.00 52.01 ATOM 182 C3B NAD B -11.390 -16.369 -2.481 1.00 52.92 ATOM 183 O3B NAD B -12.436 -17.342 -2.409 1.00 51.04 ATOM 184 C2B NAD B -10.561 -16.574 -3.730 1.00 51.66 ATOM 185 O2B NAD B -10.577 -17.940 -4.147 1.00 48.00 ATOM 186 C1B NAD B -11.273 -15.703 -4.745 1.00 56.78 ATOM 187 N9A NAD B -10.340 -15.243 -5.795 1.00 63.12 ATOM 188 C8A NAD B -9.067 -14.849 -5.616 1.00 61.83 ATOM 189 N7A NAD B -8.503 -14.485 -6.797 1.00 61.84 ATOM 190 C5A NAD B -9.436 -14.646 -7.755 1.00 63.79 ATOM 191 C6A NAD B -9.509 -14.450 -9.219 1.00 62.55 ATOM 192 N6A NAD B -8.438 -13.996 -9.908 1.00 62.68 ATOM 193 N1A NAD B -10.676 -14.738 -9.839 1.00 66.16 ATOM 194 C2A NAD B -11.747 -15.193 -9.160 1.00 70.00 ATOM 195 N3A NAD B -11.752 -15.398 -7.831 1.00 70.73 ATOM 196 C4A NAD B -10.646 -15.145 -7.088 1.00 66.73 ATOM 197 O3 NAD B -10.932 -12.633 1.252 1.00 45.45 ATOM 198 PN NAD B -12.203 -11.837 1.841 1.00 44.82 ATOM 199 O1N NAD B -12.077 -11.709 3.338 1.00 38.04 ATOM 200 O2N NAD B -13.522 -12.464 1.449 1.00 40.50 ATOM 201 O5D NAD B -12.192 -10.374 1.189 1.00 42.87 ATOM 202 C5D NAD B -12.589 -10.163 -0.163 1.00 38.57 ATOM 203 C4D NAD B -12.560 -8.659 -0.413 1.00 47.73 ATOM 204 O4D NAD B -13.443 -8.007 0.515 1.00 47.98 ATOM 205 C3D NAD B -11.171 -8.097 -0.158 1.00 44.74 ATOM 206 O3D NAD B -10.939 -7.034 -1.084 1.00 56.81 ATOM 207 C2D NAD B -11.261 -7.545 1.251 1.00 41.99 ATOM 208 O2D NAD B -10.337 -6.479 1.476 1.00 44.10 ATOM 209 C1D NAD B -12.704 -7.068 1.308 1.00 46.99 ATOM 210 N1N NAD B -13.211 -6.967 2.684 1.00 48.44 ATOM 211 C2N NAD B -12.880 -7.900 3.594 1.00 49.82 ATOM 212 C3N NAD B -13.338 -7.830 4.906 1.00 48.87 ATOM 213 C7N NAD B -12.960 -8.880 5.912 1.00 48.79 ATOM 214 O7N NAD B -12.898 -8.580 7.095 1.00 52.06 ATOM 215 N7N NAD B -12.705 -10.116 5.491 1.00 43.04 ATOM 216 C4N NAD B -14.159 -6.782 5.294 1.00 50.99 ATOM 217 C5N NAD B -14.528 -5.793 4.391 1.00 46.33 ATOM 218 C6N NAD B -14.074 -5.819 3.006 1.00 47.04 ATOM 219 C1 GOL B -29.896 9.254 4.084 1.00 73.97 ATOM 220 O1 GOL B -30.319 8.244 4.977 1.00 67.91 ATOM 221 C2 GOL B -28.396 9.518 4.215 1.00 76.23 ATOM 222 O2 GOL B -28.135 10.325 5.348 1.00 77.92 ATOM 223 C3 GOL B -27.880 10.223 2.958 1.00 74.35 ATOM 224 O3 GOL B -27.817 9.320 1.872 1.00 67.30 ATOM 225 C1 GOL B -24.333 -30.420 10.997 1.00 63.55 ATOM 226 O1 GOL B -22.992 -30.503 10.561 1.00 63.50 ATOM 227 C2 GOL B -24.369 -30.879 12.449 1.00 57.00 ATOM 228 O2 GOL B -23.116 -30.581 13.024 1.00 48.11 ATOM 229 C3 GOL B -25.487 -30.174 13.214 1.00 59.39 ATOM 230 O3 GOL B -26.166 -31.137 14.004 1.00 61.34 TER