HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEF TITLE Crystal structure of CTCF ZFs2-8-Hs5-1aE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B, G, J; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.81 ANGSTORMS DBREF 5YEF B 292 490 UNP P49711 CTCF_HUMAN 292 490 SEQRES 1 B 24 GLY LYS LYS CYS ARG TYR CYS ASP ALA VAL PHE HIS GLU SEQRES 2 B 24 ARG TYR ALA LEU ILE GLN HIS GLN LYS SER HIS ATOM 1 N GLY B 175 -70.286 -5.311 45.865 1.00 65.77 ATOM 2 CA GLY B 175 -71.632 -5.218 45.325 1.00 60.06 ATOM 3 C GLY B 175 -72.142 -6.540 44.781 1.00 57.24 ATOM 4 O GLY B 175 -71.362 -7.452 44.508 1.00 56.84 ATOM 5 N LYS B 176 -73.474 -6.655 44.663 1.00 62.90 ATOM 6 CA LYS B 176 -74.139 -7.792 44.036 1.00 62.82 ATOM 7 C LYS B 176 -75.119 -7.247 43.016 1.00 66.89 ATOM 8 O LYS B 176 -75.909 -6.352 43.348 1.00 67.51 ATOM 9 CB LYS B 176 -74.888 -8.658 45.026 1.00 62.79 ATOM 10 CG LYS B 176 -74.216 -9.987 45.255 1.00 66.69 ATOM 11 CD LYS B 176 -72.743 -9.752 45.539 1.00 60.48 ATOM 12 CE LYS B 176 -71.969 -11.034 45.708 1.00 67.26 ATOM 13 NZ LYS B 176 -72.818 -12.030 46.415 1.00 69.05 ATOM 14 N LYS B 177 -75.103 -7.819 41.799 1.00 64.30 ATOM 15 CA LYS B 177 -75.907 -7.322 40.685 1.00 63.76 ATOM 16 C LYS B 177 -77.262 -7.998 40.694 1.00 66.46 ATOM 17 O LYS B 177 -77.369 -9.195 40.960 1.00 66.21 ATOM 18 CB LYS B 177 -75.223 -7.587 39.340 1.00 65.80 ATOM 19 CG LYS B 177 -76.111 -7.253 38.113 1.00 69.68 ATOM 20 CD LYS B 177 -75.487 -7.652 36.759 1.00 72.41 ATOM 21 CE LYS B 177 -75.938 -9.026 36.226 1.00 74.01 ATOM 22 NZ LYS B 177 -77.341 -9.063 35.682 1.00 77.41 ATOM 23 N CYS B 178 -78.297 -7.222 40.394 1.00 67.13 ATOM 24 CA CYS B 178 -79.628 -7.794 40.263 1.00 69.08 ATOM 25 C CYS B 178 -79.585 -8.960 39.289 1.00 70.78 ATOM 26 O CYS B 178 -78.751 -9.001 38.382 1.00 71.72 ATOM 27 CB CYS B 178 -80.616 -6.739 39.781 1.00 72.63 ATOM 28 SG CYS B 178 -82.232 -7.380 39.303 1.00 77.79 ATOM 29 N ARG B 179 -80.478 -9.930 39.472 1.00103.52 ATOM 30 CA ARG B 179 -80.464 -11.054 38.541 1.00105.35 ATOM 31 C ARG B 179 -80.788 -10.595 37.139 1.00111.70 ATOM 32 O ARG B 179 -80.298 -11.197 36.175 1.00114.55 ATOM 33 CB ARG B 179 -81.463 -12.138 38.922 1.00109.35 ATOM 34 CG ARG B 179 -80.850 -13.539 38.881 1.00111.71 ATOM 35 CD ARG B 179 -81.851 -14.640 38.531 1.00119.36 ATOM 36 NE ARG B 179 -82.396 -15.335 39.703 1.00124.31 ATOM 37 CZ ARG B 179 -83.411 -16.199 39.652 1.00130.26 ATOM 38 NH1 ARG B 179 -84.004 -16.448 38.484 1.00136.20 ATOM 39 NH2 ARG B 179 -83.845 -16.797 40.768 1.00129.13 ATOM 40 N TYR B 180 -81.634 -9.533 36.983 1.00104.29 ATOM 41 CA TYR B 180 -82.066 -9.083 35.645 1.00108.18 ATOM 42 C TYR B 180 -81.961 -7.569 35.385 1.00108.58 ATOM 43 O TYR B 180 -82.892 -6.992 34.833 1.00113.52 ATOM 44 CB TYR B 180 -83.495 -9.522 35.373 1.00120.47 ATOM 45 CG TYR B 180 -83.868 -10.817 36.054 1.00124.89 ATOM 46 CD1 TYR B 180 -84.753 -10.814 37.110 1.00122.96 ATOM 47 CD2 TYR B 180 -83.328 -12.036 35.643 1.00124.83 ATOM 48 CE1 TYR B 180 -85.106 -11.978 37.760 1.00123.69 ATOM 49 CE2 TYR B 180 -83.683 -13.212 36.281 1.00123.21 ATOM 50 CZ TYR B 180 -84.572 -13.176 37.349 1.00124.00 ATOM 51 OH TYR B 180 -84.949 -14.319 38.033 1.00121.45 ATOM 52 N CYS B 181 -80.874 -6.916 35.794 1.00 93.07 ATOM 53 CA CYS B 181 -80.685 -5.515 35.399 1.00 96.48 ATOM 54 C CYS B 181 -79.331 -4.933 35.799 1.00 93.45 ATOM 55 O CYS B 181 -78.577 -5.539 36.564 1.00 86.59 ATOM 56 CB CYS B 181 -81.830 -4.626 35.934 1.00107.75 ATOM 57 SG CYS B 181 -81.993 -4.350 37.717 1.00112.80 ATOM 58 N ASP B 182 -79.050 -3.725 35.320 1.00119.31 ATOM 59 CA ASP B 182 -77.772 -3.082 35.559 1.00118.36 ATOM 60 C ASP B 182 -77.611 -2.578 36.996 1.00110.95 ATOM 61 O ASP B 182 -76.541 -2.048 37.318 1.00109.43 ATOM 62 CB ASP B 182 -77.563 -1.964 34.517 1.00124.02 ATOM 63 CG ASP B 182 -78.696 -0.928 34.497 1.00130.15 ATOM 64 OD1 ASP B 182 -79.347 -0.665 35.541 1.00131.75 ATOM 65 OD2 ASP B 182 -78.915 -0.344 33.408 1.00133.97 ATOM 66 N ALA B 183 -78.640 -2.690 37.840 1.00 78.20 ATOM 67 CA ALA B 183 -78.554 -2.209 39.221 1.00 75.57 ATOM 68 C ALA B 183 -77.662 -3.102 40.080 1.00 71.20 ATOM 69 O ALA B 183 -77.894 -4.308 40.203 1.00 69.69 ATOM 70 CB ALA B 183 -79.945 -2.130 39.841 1.00 76.69 ATOM 71 N VAL B 184 -76.700 -2.501 40.728 1.00 69.73 ATOM 72 CA VAL B 184 -75.829 -3.210 41.652 1.00 66.31 ATOM 73 C VAL B 184 -76.260 -2.840 43.074 1.00 65.26 ATOM 74 O VAL B 184 -76.821 -1.758 43.300 1.00 68.98 ATOM 75 CB VAL B 184 -74.358 -2.852 41.341 1.00 66.26 ATOM 76 CG1 VAL B 184 -74.123 -1.378 41.518 1.00 73.07 ATOM 77 CG2 VAL B 184 -73.390 -3.659 42.154 1.00 63.54 ATOM 78 N PHE B 185 -76.098 -3.778 44.024 1.00 69.77 ATOM 79 CA PHE B 185 -76.466 -3.557 45.427 1.00 67.83 ATOM 80 C PHE B 185 -75.343 -3.937 46.368 1.00 65.90 ATOM 81 O PHE B 185 -74.572 -4.862 46.094 1.00 64.42 ATOM 82 CB PHE B 185 -77.702 -4.357 45.847 1.00 68.78 ATOM 83 CG PHE B 185 -78.927 -3.870 45.213 1.00 72.97 ATOM 84 CD1 PHE B 185 -79.261 -4.280 43.937 1.00 75.76 ATOM 85 CD2 PHE B 185 -79.692 -2.913 45.839 1.00 75.39 ATOM 86 CE1 PHE B 185 -80.368 -3.797 43.319 1.00 79.93 ATOM 87 CE2 PHE B 185 -80.811 -2.415 45.222 1.00 79.21 ATOM 88 CZ PHE B 185 -81.138 -2.852 43.948 1.00 81.82 ATOM 89 N HIS B 186 -75.335 -3.283 47.534 1.00 73.97 ATOM 90 CA HIS B 186 -74.298 -3.496 48.531 1.00 73.50 ATOM 91 C HIS B 186 -74.830 -4.110 49.822 1.00 77.30 ATOM 92 O HIS B 186 -74.051 -4.308 50.772 1.00 80.08 ATOM 93 CB HIS B 186 -73.557 -2.181 48.812 1.00 75.40 ATOM 94 CG HIS B 186 -72.774 -1.661 47.638 1.00 81.78 ATOM 95 ND1 HIS B 186 -71.469 -2.039 47.383 1.00 84.00 ATOM 96 CD2 HIS B 186 -73.114 -0.794 46.649 1.00 82.13 ATOM 97 CE1 HIS B 186 -71.040 -1.422 46.293 1.00 81.36 ATOM 98 NE2 HIS B 186 -72.018 -0.661 45.828 1.00 79.47 ATOM 99 N GLU B 187 -76.124 -4.417 49.898 1.00 78.02 ATOM 100 CA GLU B 187 -76.662 -5.188 51.012 1.00 76.97 ATOM 101 C GLU B 187 -77.656 -6.183 50.432 1.00 74.60 ATOM 102 O GLU B 187 -78.446 -5.842 49.545 1.00 72.45 ATOM 103 CB GLU B 187 -77.293 -4.286 52.097 1.00 79.83 ATOM 104 CG GLU B 187 -78.778 -3.985 51.974 1.00 85.16 ATOM 105 CD GLU B 187 -79.398 -3.430 53.276 1.00 92.50 ATOM 106 OE1 GLU B 187 -78.917 -3.785 54.385 1.00 95.89 ATOM 107 OE2 GLU B 187 -80.363 -2.625 53.190 1.00 95.75 ATOM 108 N ARG B 188 -77.535 -7.436 50.857 1.00 57.18 ATOM 109 CA ARG B 188 -78.331 -8.489 50.249 1.00 55.86 ATOM 110 C ARG B 188 -79.827 -8.236 50.417 1.00 59.93 ATOM 111 O ARG B 188 -80.637 -8.612 49.561 1.00 64.66 ATOM 112 CB ARG B 188 -77.928 -9.826 50.846 1.00 54.59 ATOM 113 CG ARG B 188 -78.833 -10.902 50.460 1.00 56.76 ATOM 114 CD ARG B 188 -78.306 -12.223 50.851 1.00 54.83 ATOM 115 NE ARG B 188 -79.220 -13.224 50.348 1.00 62.54 ATOM 116 CZ ARG B 188 -79.252 -13.624 49.085 1.00 63.74 ATOM 117 NH1 ARG B 188 -78.393 -13.132 48.199 1.00 59.86 ATOM 118 NH2 ARG B 188 -80.147 -14.522 48.709 1.00 65.94 ATOM 119 N TYR B 189 -80.220 -7.617 51.520 1.00 67.30 ATOM 120 CA TYR B 189 -81.639 -7.385 51.733 1.00 71.31 ATOM 121 C TYR B 189 -82.220 -6.533 50.621 1.00 75.02 ATOM 122 O TYR B 189 -83.167 -6.948 49.944 1.00 77.96 ATOM 123 CB TYR B 189 -81.858 -6.714 53.084 1.00 67.85 ATOM 124 CG TYR B 189 -83.259 -6.228 53.299 1.00 72.39 ATOM 125 CD1 TYR B 189 -84.332 -7.106 53.322 1.00 79.05 ATOM 126 CD2 TYR B 189 -83.516 -4.860 53.391 1.00 73.15 ATOM 127 CE1 TYR B 189 -85.624 -6.645 53.507 1.00 86.19 ATOM 128 CE2 TYR B 189 -84.798 -4.380 53.557 1.00 77.76 ATOM 129 CZ TYR B 189 -85.855 -5.280 53.619 1.00 84.05 ATOM 130 OH TYR B 189 -87.142 -4.817 53.799 1.00 87.08 ATOM 131 N ALA B 190 -81.632 -5.357 50.393 1.00 72.94 ATOM 132 CA ALA B 190 -82.142 -4.475 49.357 1.00 71.41 ATOM 133 C ALA B 190 -82.128 -5.170 48.011 1.00 72.83 ATOM 134 O ALA B 190 -83.017 -4.936 47.199 1.00 77.48 ATOM 135 CB ALA B 190 -81.335 -3.181 49.299 1.00 67.89 ATOM 136 N LEU B 191 -81.133 -6.028 47.773 1.00 66.09 ATOM 137 CA LEU B 191 -81.045 -6.790 46.527 1.00 64.64 ATOM 138 C LEU B 191 -82.256 -7.687 46.338 1.00 67.50 ATOM 139 O LEU B 191 -82.901 -7.661 45.289 1.00 71.03 ATOM 140 CB LEU B 191 -79.791 -7.660 46.526 1.00 60.46 ATOM 141 CG LEU B 191 -79.647 -8.730 45.437 1.00 66.42 ATOM 142 CD1 LEU B 191 -79.505 -8.173 44.032 1.00 70.18 ATOM 143 CD2 LEU B 191 -78.535 -9.680 45.761 1.00 57.92 ATOM 144 N ILE B 192 -82.569 -8.507 47.343 1.00 64.35 ATOM 145 CA ILE B 192 -83.713 -9.412 47.234 1.00 66.65 ATOM 146 C ILE B 192 -85.004 -8.614 47.118 1.00 71.72 ATOM 147 O ILE B 192 -85.972 -9.050 46.482 1.00 76.66 ATOM 148 CB ILE B 192 -83.758 -10.382 48.429 1.00 65.94 ATOM 149 CG1 ILE B 192 -82.468 -11.204 48.523 1.00 61.21 ATOM 150 CG2 ILE B 192 -84.930 -11.317 48.298 1.00 71.13 ATOM 151 CD1 ILE B 192 -82.338 -12.319 47.494 1.00 62.00 ATOM 152 N GLN B 193 -85.062 -7.467 47.792 1.00 80.75 ATOM 153 CA GLN B 193 -86.263 -6.649 47.740 1.00 85.49 ATOM 154 C GLN B 193 -86.444 -6.050 46.358 1.00 90.04 ATOM 155 O GLN B 193 -87.541 -6.080 45.785 1.00 94.77 ATOM 156 CB GLN B 193 -86.171 -5.543 48.793 1.00 83.93 ATOM 157 CG GLN B 193 -86.370 -6.054 50.216 1.00 83.12 ATOM 158 CD GLN B 193 -87.697 -6.728 50.417 1.00 88.65 ATOM 159 OE1 GLN B 193 -88.732 -6.080 50.401 1.00 92.76 ATOM 160 NE2 GLN B 193 -87.671 -8.040 50.643 1.00 88.98 ATOM 161 N HIS B 194 -85.343 -5.567 45.791 1.00102.77 ATOM 162 CA HIS B 194 -85.328 -4.869 44.527 1.00103.51 ATOM 163 C HIS B 194 -85.832 -5.734 43.411 1.00108.81 ATOM 164 O HIS B 194 -86.228 -5.199 42.368 1.00117.29 ATOM 165 CB HIS B 194 -83.924 -4.411 44.197 1.00 99.92 ATOM 166 CG HIS B 194 -83.812 -3.814 42.836 1.00100.68 ATOM 167 ND1 HIS B 194 -83.980 -2.466 42.618 1.00106.91 ATOM 168 CD2 HIS B 194 -83.604 -4.371 41.621 1.00100.26 ATOM 169 CE1 HIS B 194 -83.845 -2.211 41.329 1.00111.51 ATOM 170 NE2 HIS B 194 -83.623 -3.352 40.700 1.00108.94 ATOM 171 N GLN B 195 -85.734 -7.049 43.568 1.00 79.88 ATOM 172 CA GLN B 195 -86.047 -7.921 42.455 1.00 83.13 ATOM 173 C GLN B 195 -87.429 -7.586 41.909 1.00100.50 ATOM 174 O GLN B 195 -87.596 -7.377 40.705 1.00108.44 ATOM 175 CB GLN B 195 -85.999 -9.386 42.876 1.00 82.19 ATOM 176 CG GLN B 195 -84.754 -9.865 43.625 1.00 75.49 ATOM 177 CD GLN B 195 -83.454 -10.023 42.829 1.00 71.37 ATOM 178 OE1 GLN B 195 -82.768 -9.051 42.565 1.00 76.05 ATOM 179 NE2 GLN B 195 -83.080 -11.262 42.521 1.00 70.27 ATOM 180 N LYS B 196 -88.400 -7.347 42.790 1.00106.23 ATOM 181 CA LYS B 196 -89.721 -6.986 42.284 1.00115.01 ATOM 182 C LYS B 196 -89.709 -5.546 41.759 1.00111.65 ATOM 183 O LYS B 196 -89.135 -4.651 42.381 1.00109.79 ATOM 184 CB LYS B 196 -90.768 -7.182 43.376 1.00120.60 ATOM 185 CG LYS B 196 -91.199 -8.644 43.567 1.00122.29 ATOM 186 CD LYS B 196 -90.072 -9.656 43.310 1.00118.68 ATOM 187 CE LYS B 196 -89.613 -10.376 44.590 1.00110.85 ATOM 188 NZ LYS B 196 -89.135 -9.509 45.718 1.00107.46 ATOM 189 N SER B 197 -90.423 -5.286 40.657 1.00110.68 ATOM 190 CA SER B 197 -91.359 -6.199 39.990 1.00112.70 ATOM 191 C SER B 197 -90.818 -7.484 39.375 1.00111.77 ATOM 192 O SER B 197 -91.542 -8.467 39.356 1.00116.29 ATOM 193 CB SER B 197 -92.134 -5.418 38.905 1.00115.83 ATOM 194 N HIS B 198 -89.585 -7.460 38.849 1.00116.33 ATOM 195 CA HIS B 198 -89.013 -8.581 38.051 1.00118.32 ATOM 196 C HIS B 198 -89.671 -9.953 38.223 1.00122.95 ATOM 197 O HIS B 198 -90.783 -10.216 37.745 1.00129.16 ATOM 198 CB HIS B 198 -87.524 -8.763 38.369 1.00112.99 ATOM 199 CG HIS B 198 -86.668 -7.610 37.976 1.00106.29 ATOM 200 ND1 HIS B 198 -87.084 -6.639 37.096 1.00109.23 ATOM 201 CD2 HIS B 198 -85.431 -7.246 38.386 1.00100.84 ATOM 202 CE1 HIS B 198 -86.127 -5.741 36.948 1.00105.70 ATOM 203 NE2 HIS B 198 -85.114 -6.083 37.727 1.00101.96 ATOM 204 ZN ZN B -83.577 -5.562 38.639 1.00 98.83 TER