HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEF TITLE Crystal structure of CTCF ZFs2-8-Hs5-1aE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B, G, J; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.81 ANGSTORMS DBREF 5YEF G 292 490 UNP P49711 CTCF_HUMAN 292 490 SEQRES 1 G 28 HIS GLU LYS PRO PHE LYS CYS SER MET CYS ASP TYR ALA SEQRES 2 G 28 SER VAL GLU VAL SER LYS LEU LYS ARG HIS ILE ARG SER SEQRES 3 G 28 HIS THR ATOM 1 N HIS G 56 -33.677 -0.571 98.380 1.00100.66 ATOM 2 CA HIS G 56 -34.302 -0.087 97.155 1.00 87.64 ATOM 3 C HIS G 56 -35.775 -0.462 97.166 1.00 98.79 ATOM 4 O HIS G 56 -36.168 -1.507 96.659 1.00105.73 ATOM 5 CB HIS G 56 -33.556 -0.658 95.968 1.00 75.24 ATOM 6 CG HIS G 56 -32.078 -0.584 96.129 1.00 80.32 ATOM 7 ND1 HIS G 56 -31.410 0.613 96.242 1.00105.57 ATOM 8 CD2 HIS G 56 -31.150 -1.550 96.304 1.00 63.41 ATOM 9 CE1 HIS G 56 -30.123 0.384 96.413 1.00109.83 ATOM 10 NE2 HIS G 56 -29.939 -0.922 96.458 1.00 88.08 ATOM 11 N GLU G 57 -36.614 0.427 97.707 1.00 95.95 ATOM 12 CA GLU G 57 -38.019 0.083 97.893 1.00 99.45 ATOM 13 C GLU G 57 -38.768 -0.000 96.567 1.00113.51 ATOM 14 O GLU G 57 -39.428 -1.012 96.290 1.00113.41 ATOM 15 CB GLU G 57 -38.703 1.105 98.782 1.00 89.84 ATOM 16 N LYS G 58 -38.692 1.044 95.750 1.00126.81 ATOM 17 CA LYS G 58 -39.377 1.104 94.466 1.00131.20 ATOM 18 C LYS G 58 -40.864 0.769 94.615 1.00146.46 ATOM 19 O LYS G 58 -41.326 -0.255 94.116 1.00154.31 ATOM 20 CB LYS G 58 -38.717 0.174 93.455 1.00117.14 ATOM 21 N PRO G 59 -41.632 1.613 95.331 1.00147.10 ATOM 22 CA PRO G 59 -43.071 1.311 95.489 1.00144.98 ATOM 23 C PRO G 59 -43.967 1.466 94.250 1.00134.98 ATOM 24 O PRO G 59 -44.835 0.612 94.040 1.00136.44 ATOM 25 CB PRO G 59 -43.478 2.271 96.608 1.00148.01 ATOM 26 CG PRO G 59 -42.448 3.356 96.576 1.00146.97 ATOM 27 CD PRO G 59 -41.199 2.611 96.327 1.00146.03 ATOM 28 N PHE G 60 -43.824 2.536 93.457 1.00167.29 ATOM 29 CA PHE G 60 -44.785 2.868 92.398 1.00170.77 ATOM 30 C PHE G 60 -44.389 2.296 91.029 1.00163.76 ATOM 31 O PHE G 60 -43.270 2.523 90.568 1.00167.00 ATOM 32 CB PHE G 60 -44.916 4.387 92.263 1.00168.98 ATOM 33 CG PHE G 60 -44.797 5.155 93.556 1.00163.94 ATOM 34 CD1 PHE G 60 -45.914 5.589 94.246 1.00168.77 ATOM 35 CD2 PHE G 60 -43.544 5.427 94.084 1.00153.01 ATOM 36 CE1 PHE G 60 -45.788 6.295 95.428 1.00164.01 ATOM 37 CE2 PHE G 60 -43.417 6.141 95.259 1.00152.20 ATOM 38 CZ PHE G 60 -44.540 6.567 95.937 1.00157.89 ATOM 39 N LYS G 61 -45.317 1.601 90.355 1.00132.55 ATOM 40 CA LYS G 61 -45.033 0.933 89.081 1.00123.74 ATOM 41 C LYS G 61 -45.880 1.480 87.927 1.00120.87 ATOM 42 O LYS G 61 -46.955 2.050 88.131 1.00118.80 ATOM 43 CB LYS G 61 -45.223 -0.579 89.193 1.00123.55 ATOM 44 N CYS G 62 -45.377 1.286 86.698 1.00138.54 ATOM 45 CA CYS G 62 -45.920 1.900 85.486 1.00148.10 ATOM 46 C CYS G 62 -46.949 1.022 84.740 1.00148.13 ATOM 47 O CYS G 62 -47.312 -0.074 85.169 1.00142.62 ATOM 48 CB CYS G 62 -44.787 2.310 84.553 1.00166.90 ATOM 49 SG CYS G 62 -45.328 3.556 83.374 1.00190.21 ATOM 50 N SER G 63 -47.438 1.531 83.600 1.00176.97 ATOM 51 CA SER G 63 -48.493 0.881 82.820 1.00186.65 ATOM 52 C SER G 63 -47.963 0.005 81.679 1.00190.78 ATOM 53 O SER G 63 -48.304 -1.179 81.585 1.00195.16 ATOM 54 CB SER G 63 -49.449 1.940 82.236 1.00186.41 ATOM 55 OG SER G 63 -48.887 2.610 81.105 1.00183.18 ATOM 56 N MET G 64 -47.131 0.577 80.806 1.00181.87 ATOM 57 CA MET G 64 -46.676 -0.083 79.582 1.00177.87 ATOM 58 C MET G 64 -45.301 -0.750 79.702 1.00174.67 ATOM 59 O MET G 64 -44.928 -1.503 78.797 1.00173.00 ATOM 60 CB MET G 64 -46.678 0.923 78.409 1.00175.76 ATOM 61 N CYS G 65 -44.502 -0.431 80.727 1.00146.84 ATOM 62 CA CYS G 65 -43.185 -1.035 80.922 1.00134.66 ATOM 63 C CYS G 65 -43.080 -1.644 82.324 1.00135.16 ATOM 64 O CYS G 65 -43.972 -1.487 83.171 1.00140.62 ATOM 65 CB CYS G 65 -42.076 -0.008 80.710 1.00121.93 ATOM 66 SG CYS G 65 -42.416 1.451 81.635 1.00120.48 ATOM 67 N ASP G 66 -41.980 -2.371 82.545 1.00126.41 ATOM 68 CA ASP G 66 -41.703 -3.004 83.822 1.00129.35 ATOM 69 C ASP G 66 -40.967 -2.075 84.779 1.00128.18 ATOM 70 O ASP G 66 -40.115 -2.546 85.545 1.00122.51 ATOM 71 CB ASP G 66 -40.886 -4.291 83.625 1.00123.21 ATOM 72 N TYR G 67 -41.301 -0.783 84.774 1.00130.11 ATOM 73 CA TYR G 67 -40.620 0.223 85.587 1.00121.77 ATOM 74 C TYR G 67 -41.323 0.457 86.925 1.00123.23 ATOM 75 O TYR G 67 -42.535 0.271 87.064 1.00127.64 ATOM 76 CB TYR G 67 -40.528 1.547 84.824 1.00117.64 ATOM 77 CG TYR G 67 -39.963 2.741 85.589 1.00112.79 ATOM 78 CD1 TYR G 67 -40.785 3.588 86.322 1.00110.55 ATOM 79 CD2 TYR G 67 -38.611 3.043 85.531 1.00104.71 ATOM 80 CE1 TYR G 67 -40.268 4.688 86.996 1.00102.00 ATOM 81 CE2 TYR G 67 -38.083 4.137 86.199 1.00 99.49 ATOM 82 CZ TYR G 67 -38.912 4.961 86.932 1.00 98.90 ATOM 83 OH TYR G 67 -38.375 6.055 87.591 1.00 90.72 ATOM 84 N ALA G 68 -40.527 0.842 87.922 1.00116.13 ATOM 85 CA ALA G 68 -41.030 1.251 89.227 1.00111.10 ATOM 86 C ALA G 68 -39.942 2.059 89.917 1.00102.49 ATOM 87 O ALA G 68 -38.756 1.808 89.705 1.00102.72 ATOM 88 CB ALA G 68 -41.439 0.040 90.075 1.00113.00 ATOM 89 N SER G 69 -40.338 3.045 90.725 1.00118.49 ATOM 90 CA SER G 69 -39.331 3.867 91.397 1.00117.98 ATOM 91 C SER G 69 -39.821 4.406 92.733 1.00117.56 ATOM 92 O SER G 69 -40.962 4.196 93.145 1.00120.04 ATOM 93 CB SER G 69 -38.831 5.001 90.523 1.00116.63 ATOM 94 OG SER G 69 -37.468 5.260 90.848 1.00110.23 ATOM 95 N VAL G 70 -38.893 5.087 93.417 1.00115.19 ATOM 96 CA VAL G 70 -39.041 5.527 94.809 1.00114.24 ATOM 97 C VAL G 70 -40.001 6.706 94.971 1.00113.27 ATOM 98 O VAL G 70 -40.588 6.880 96.051 1.00109.16 ATOM 99 CB VAL G 70 -37.647 5.833 95.389 1.00108.31 ATOM 100 CG1 VAL G 70 -37.740 6.427 96.788 1.00105.77 ATOM 101 CG2 VAL G 70 -36.803 4.564 95.400 1.00107.03 ATOM 102 N GLU G 71 -40.128 7.576 93.980 1.00113.58 ATOM 103 CA GLU G 71 -41.028 8.722 94.092 1.00111.92 ATOM 104 C GLU G 71 -42.041 8.704 92.956 1.00118.22 ATOM 105 O GLU G 71 -41.689 8.370 91.818 1.00122.21 ATOM 106 CB GLU G 71 -40.260 10.038 94.077 1.00110.96 ATOM 107 CG GLU G 71 -39.288 10.244 95.229 1.00108.82 ATOM 108 CD GLU G 71 -39.232 11.701 95.647 1.00110.17 ATOM 109 OE1 GLU G 71 -38.967 12.563 94.779 1.00109.34 ATOM 110 OE2 GLU G 71 -39.499 11.993 96.837 1.00112.53 ATOM 111 N VAL G 72 -43.286 9.111 93.248 1.00105.40 ATOM 112 CA VAL G 72 -44.301 9.145 92.194 1.00106.37 ATOM 113 C VAL G 72 -43.967 10.239 91.193 1.00105.79 ATOM 114 O VAL G 72 -44.300 10.126 90.009 1.00104.46 ATOM 115 CB VAL G 72 -45.726 9.318 92.754 1.00110.04 ATOM 116 CG1 VAL G 72 -46.078 10.791 92.942 1.00112.09 ATOM 117 CG2 VAL G 72 -46.744 8.610 91.869 1.00114.23 ATOM 118 N SER G 73 -43.348 11.330 91.647 1.00139.97 ATOM 119 CA SER G 73 -42.891 12.351 90.712 1.00140.12 ATOM 120 C SER G 73 -42.101 11.709 89.580 1.00141.71 ATOM 121 O SER G 73 -42.268 12.064 88.402 1.00146.52 ATOM 122 CB SER G 73 -42.055 13.389 91.451 1.00138.54 ATOM 123 OG SER G 73 -40.681 13.038 91.442 1.00135.30 ATOM 124 N LYS G 74 -41.244 10.743 89.921 1.00110.46 ATOM 125 CA LYS G 74 -40.465 10.037 88.908 1.00110.48 ATOM 126 C LYS G 74 -41.350 9.253 87.943 1.00117.59 ATOM 127 O LYS G 74 -41.129 9.294 86.733 1.00121.13 ATOM 128 CB LYS G 74 -39.450 9.116 89.590 1.00105.40 ATOM 129 CG LYS G 74 -38.146 9.766 90.037 1.00 97.12 ATOM 130 CD LYS G 74 -38.309 11.162 90.560 1.00 92.58 ATOM 131 CE LYS G 74 -36.962 11.805 90.736 1.00 86.31 ATOM 132 NZ LYS G 74 -36.951 12.886 91.736 1.00 85.87 ATOM 133 N LEU G 75 -42.377 8.558 88.435 1.00121.67 ATOM 134 CA LEU G 75 -43.143 7.753 87.484 1.00121.87 ATOM 135 C LEU G 75 -44.041 8.643 86.626 1.00122.76 ATOM 136 O LEU G 75 -44.235 8.370 85.438 1.00124.56 ATOM 137 CB LEU G 75 -43.954 6.675 88.214 1.00121.99 ATOM 138 CG LEU G 75 -44.707 5.510 87.517 1.00126.32 ATOM 139 CD1 LEU G 75 -45.708 4.971 88.514 1.00131.10 ATOM 140 CD2 LEU G 75 -45.392 5.743 86.142 1.00127.23 ATOM 141 N LYS G 76 -44.667 9.656 87.230 1.00115.33 ATOM 142 CA LYS G 76 -45.356 10.672 86.444 1.00113.99 ATOM 143 C LYS G 76 -44.444 11.185 85.337 1.00107.89 ATOM 144 O LYS G 76 -44.853 11.302 84.176 1.00109.63 ATOM 145 CB LYS G 76 -45.837 11.807 87.353 1.00111.66 ATOM 146 N ARG G 77 -43.188 11.474 85.678 1.00107.66 ATOM 147 CA ARG G 77 -42.247 11.872 84.641 1.00109.24 ATOM 148 C ARG G 77 -41.988 10.741 83.641 1.00111.71 ATOM 149 O ARG G 77 -41.788 11.001 82.448 1.00113.39 ATOM 150 CB ARG G 77 -40.951 12.355 85.285 1.00104.83 ATOM 151 CG ARG G 77 -39.962 12.936 84.306 1.00102.93 ATOM 152 CD ARG G 77 -38.726 12.087 84.317 1.00101.75 ATOM 153 NE ARG G 77 -37.763 12.507 85.327 1.00 96.24 ATOM 154 CZ ARG G 77 -37.011 11.650 86.003 1.00 94.18 ATOM 155 NH1 ARG G 77 -37.156 10.350 85.765 1.00 97.54 ATOM 156 NH2 ARG G 77 -36.134 12.082 86.908 1.00 86.84 ATOM 157 N HIS G 78 -41.990 9.491 84.110 1.00106.75 ATOM 158 CA HIS G 78 -41.658 8.349 83.262 1.00108.49 ATOM 159 C HIS G 78 -42.725 8.097 82.197 1.00117.50 ATOM 160 O HIS G 78 -42.396 7.830 81.032 1.00119.97 ATOM 161 CB HIS G 78 -41.467 7.116 84.142 1.00106.33 ATOM 162 CG HIS G 78 -41.565 5.825 83.397 1.00114.75 ATOM 163 ND1 HIS G 78 -40.554 5.342 82.599 1.00114.36 ATOM 164 CD2 HIS G 78 -42.584 4.940 83.292 1.00123.52 ATOM 165 CE1 HIS G 78 -40.934 4.199 82.058 1.00120.45 ATOM 166 NE2 HIS G 78 -42.165 3.933 82.460 1.00127.54 ATOM 167 N ILE G 79 -44.003 8.198 82.577 1.00128.74 ATOM 168 CA ILE G 79 -45.094 7.768 81.705 1.00135.39 ATOM 169 C ILE G 79 -45.092 8.570 80.419 1.00135.71 ATOM 170 O ILE G 79 -45.549 8.092 79.377 1.00139.50 ATOM 171 CB ILE G 79 -46.461 7.858 82.421 1.00142.55 ATOM 172 CG1 ILE G 79 -47.486 6.964 81.715 1.00150.76 ATOM 173 CG2 ILE G 79 -46.978 9.305 82.474 1.00143.23 ATOM 174 CD1 ILE G 79 -48.689 6.609 82.565 1.00157.25 ATOM 175 N ARG G 80 -44.582 9.798 80.471 1.00130.12 ATOM 176 CA ARG G 80 -44.465 10.648 79.291 1.00127.39 ATOM 177 C ARG G 80 -43.595 10.037 78.186 1.00122.81 ATOM 178 O ARG G 80 -43.639 10.516 77.041 1.00127.94 ATOM 179 CB ARG G 80 -43.934 12.000 79.734 1.00121.02 ATOM 180 CG ARG G 80 -44.741 12.584 80.859 1.00120.14 ATOM 181 CD ARG G 80 -43.825 13.223 81.869 1.00116.13 ATOM 182 NE ARG G 80 -44.546 13.833 82.976 1.00118.19 ATOM 183 CZ ARG G 80 -45.222 14.968 82.861 1.00121.39 ATOM 184 NH1 ARG G 80 -45.250 15.595 81.696 1.00126.06 ATOM 185 NH2 ARG G 80 -45.858 15.481 83.904 1.00120.44 ATOM 186 N SER G 81 -42.754 9.045 78.505 1.00130.23 ATOM 187 CA SER G 81 -42.080 8.315 77.433 1.00131.74 ATOM 188 C SER G 81 -43.065 7.432 76.672 1.00136.55 ATOM 189 O SER G 81 -42.883 7.195 75.470 1.00140.09 ATOM 190 CB SER G 81 -40.921 7.487 77.991 1.00124.86 ATOM 191 OG SER G 81 -39.982 8.324 78.644 1.00120.79 ATOM 192 N HIS G 82 -44.125 6.965 77.344 1.00118.33 ATOM 193 CA HIS G 82 -45.207 6.240 76.680 1.00126.38 ATOM 194 C HIS G 82 -46.183 7.210 76.011 1.00141.58 ATOM 195 O HIS G 82 -46.411 7.139 74.799 1.00142.93 ATOM 196 CB HIS G 82 -45.935 5.353 77.703 1.00128.08 ATOM 197 CG HIS G 82 -45.044 4.385 78.426 1.00121.93 ATOM 198 ND1 HIS G 82 -44.197 3.516 77.772 1.00120.29 ATOM 199 CD2 HIS G 82 -44.841 4.181 79.750 1.00121.53 ATOM 200 CE1 HIS G 82 -43.535 2.798 78.662 1.00116.93 ATOM 201 NE2 HIS G 82 -43.905 3.183 79.870 1.00119.75 ATOM 202 N THR G 83 -46.766 8.123 76.798 1.00 90.01 ATOM 203 CA THR G 83 -47.752 9.072 76.281 1.00113.67 ATOM 204 C THR G 83 -47.154 9.971 75.202 1.00125.45 ATOM 205 O THR G 83 -47.597 9.963 74.048 1.00127.74 ATOM 206 CB THR G 83 -48.314 9.935 77.426 1.00104.44 ATOM 207 OG1 THR G 83 -47.456 11.064 77.660 1.00 86.57 ATOM 208 CG2 THR G 83 -48.448 9.120 78.712 1.00 66.34 ATOM 209 ZN ZN G -44.162 2.252 82.175 1.00272.20 TER