HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 5YEF TITLE Crystal structure of CTCF ZFs2-8-Hs5-1aE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, B, G, J; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.81 ANGSTORMS DBREF 5YEF G 292 490 UNP P49711 CTCF_HUMAN 292 490 SEQRES 1 G 24 GLY LYS LYS CYS ARG TYR CYS ASP ALA VAL PHE HIS GLU SEQRES 2 G 24 ARG TYR ALA LEU ILE GLN HIS GLN LYS SER HIS ATOM 1 N GLY G 175 -31.448 -2.238 46.789 1.00 72.72 ATOM 2 CA GLY G 175 -30.138 -2.627 46.321 1.00 64.00 ATOM 3 C GLY G 175 -29.374 -1.468 45.698 1.00 59.82 ATOM 4 O GLY G 175 -29.910 -0.394 45.417 1.00 56.38 ATOM 5 N LYS G 176 -28.074 -1.675 45.549 1.00 68.20 ATOM 6 CA LYS G 176 -27.213 -0.740 44.850 1.00 65.45 ATOM 7 C LYS G 176 -26.404 -1.552 43.850 1.00 70.32 ATOM 8 O LYS G 176 -25.945 -2.652 44.180 1.00 75.50 ATOM 9 CB LYS G 176 -26.326 0.033 45.824 1.00 66.69 ATOM 10 CG LYS G 176 -27.091 1.065 46.703 1.00 69.18 ATOM 11 CD LYS G 176 -28.090 1.888 45.843 1.00 71.60 ATOM 12 CE LYS G 176 -28.417 3.286 46.381 1.00 76.25 ATOM 13 NZ LYS G 176 -27.203 4.144 46.389 1.00 78.48 ATOM 14 N LYS G 177 -26.306 -1.064 42.610 1.00 69.08 ATOM 15 CA LYS G 177 -25.604 -1.789 41.562 1.00 66.02 ATOM 16 C LYS G 177 -24.161 -1.318 41.495 1.00 68.71 ATOM 17 O LYS G 177 -23.867 -0.156 41.777 1.00 71.58 ATOM 18 CB LYS G 177 -26.304 -1.625 40.205 1.00 63.33 ATOM 19 CG LYS G 177 -25.538 -2.221 38.994 1.00 68.79 ATOM 20 CD LYS G 177 -26.273 -1.985 37.635 1.00 65.90 ATOM 21 CE LYS G 177 -25.846 -0.705 36.882 1.00 65.24 ATOM 22 NZ LYS G 177 -24.481 -0.781 36.272 1.00 67.61 ATOM 23 N CYS G 178 -23.249 -2.245 41.208 1.00 58.64 ATOM 24 CA CYS G 178 -21.866 -1.861 40.976 1.00 59.47 ATOM 25 C CYS G 178 -21.787 -0.807 39.879 1.00 63.33 ATOM 26 O CYS G 178 -22.552 -0.842 38.905 1.00 58.74 ATOM 27 CB CYS G 178 -21.034 -3.075 40.571 1.00 60.36 ATOM 28 SG CYS G 178 -19.406 -2.585 40.012 1.00 67.77 ATOM 29 N ARG G 179 -20.852 0.133 40.024 1.00 89.82 ATOM 30 CA ARG G 179 -20.727 1.158 38.989 1.00 93.34 ATOM 31 C ARG G 179 -20.115 0.610 37.690 1.00 95.72 ATOM 32 O ARG G 179 -20.330 1.205 36.621 1.00 95.97 ATOM 33 CB ARG G 179 -19.960 2.392 39.489 1.00 97.09 ATOM 34 CG ARG G 179 -20.000 3.528 38.423 1.00102.40 ATOM 35 CD ARG G 179 -19.254 4.806 38.773 1.00102.73 ATOM 36 NE ARG G 179 -17.854 4.529 39.035 1.00106.89 ATOM 37 CZ ARG G 179 -16.909 5.454 39.141 1.00111.60 ATOM 38 NH1 ARG G 179 -17.208 6.737 38.963 1.00110.08 ATOM 39 NH2 ARG G 179 -15.662 5.090 39.412 1.00116.05 ATOM 40 N TYR G 180 -19.306 -0.466 37.746 1.00 86.07 ATOM 41 CA TYR G 180 -18.623 -0.912 36.538 1.00 88.40 ATOM 42 C TYR G 180 -19.007 -2.318 36.079 1.00 85.61 ATOM 43 O TYR G 180 -18.416 -2.804 35.105 1.00 95.69 ATOM 44 CB TYR G 180 -17.085 -0.904 36.692 1.00 95.51 ATOM 45 CG TYR G 180 -16.332 0.139 37.535 1.00 97.31 ATOM 46 CD1 TYR G 180 -14.938 0.085 37.622 1.00104.74 ATOM 47 CD2 TYR G 180 -16.959 1.219 38.126 1.00 94.70 ATOM 48 CE1 TYR G 180 -14.210 1.025 38.333 1.00107.35 ATOM 49 CE2 TYR G 180 -16.238 2.145 38.867 1.00 97.95 ATOM 50 CZ TYR G 180 -14.867 2.056 38.950 1.00104.45 ATOM 51 OH TYR G 180 -14.159 3.000 39.663 1.00105.85 ATOM 52 N CYS G 181 -19.961 -2.991 36.729 1.00 70.58 ATOM 53 CA CYS G 181 -20.463 -4.291 36.280 1.00 67.82 ATOM 54 C CYS G 181 -21.927 -4.379 36.695 1.00 69.30 ATOM 55 O CYS G 181 -22.470 -3.462 37.323 1.00 72.51 ATOM 56 CB CYS G 181 -19.657 -5.491 36.806 1.00 74.42 ATOM 57 SG CYS G 181 -19.814 -6.068 38.561 1.00 80.34 ATOM 58 N ASP G 182 -22.586 -5.476 36.315 1.00 79.14 ATOM 59 CA ASP G 182 -24.009 -5.646 36.606 1.00 76.89 ATOM 60 C ASP G 182 -24.305 -6.139 38.023 1.00 77.34 ATOM 61 O ASP G 182 -25.480 -6.332 38.341 1.00 78.25 ATOM 62 CB ASP G 182 -24.682 -6.591 35.601 1.00 73.90 ATOM 63 CG ASP G 182 -24.134 -8.003 35.665 1.00 81.83 ATOM 64 OD1 ASP G 182 -24.037 -8.635 34.585 1.00 85.26 ATOM 65 OD2 ASP G 182 -23.758 -8.473 36.772 1.00 85.14 ATOM 66 N ALA G 183 -23.299 -6.444 38.838 1.00 65.28 ATOM 67 CA ALA G 183 -23.561 -7.044 40.152 1.00 66.29 ATOM 68 C ALA G 183 -24.271 -6.055 41.072 1.00 64.57 ATOM 69 O ALA G 183 -23.881 -4.888 41.161 1.00 65.25 ATOM 70 CB ALA G 183 -22.260 -7.526 40.794 1.00 65.10 ATOM 71 N VAL G 184 -25.346 -6.520 41.727 1.00 72.01 ATOM 72 CA VAL G 184 -26.110 -5.715 42.686 1.00 76.15 ATOM 73 C VAL G 184 -25.820 -6.135 44.144 1.00 78.38 ATOM 74 O VAL G 184 -25.613 -7.322 44.453 1.00 80.06 ATOM 75 CB VAL G 184 -27.611 -5.806 42.344 1.00 75.29 ATOM 76 CG1 VAL G 184 -28.073 -7.251 42.336 1.00 77.35 ATOM 77 CG2 VAL G 184 -28.451 -4.988 43.320 1.00 77.72 ATOM 78 N PHE G 185 -25.805 -5.160 45.055 1.00 69.31 ATOM 79 CA PHE G 185 -25.507 -5.431 46.457 1.00 70.48 ATOM 80 C PHE G 185 -26.536 -4.801 47.377 1.00 72.86 ATOM 81 O PHE G 185 -27.246 -3.865 47.005 1.00 75.08 ATOM 82 CB PHE G 185 -24.120 -4.937 46.824 1.00 70.00 ATOM 83 CG PHE G 185 -23.042 -5.718 46.180 1.00 75.13 ATOM 84 CD1 PHE G 185 -22.656 -5.443 44.878 1.00 75.35 ATOM 85 CD2 PHE G 185 -22.444 -6.767 46.848 1.00 77.38 ATOM 86 CE1 PHE G 185 -21.675 -6.185 44.277 1.00 75.70 ATOM 87 CE2 PHE G 185 -21.450 -7.516 46.249 1.00 79.27 ATOM 88 CZ PHE G 185 -21.061 -7.225 44.969 1.00 78.51 ATOM 89 N HIS G 186 -26.616 -5.340 48.596 1.00 78.51 ATOM 90 CA HIS G 186 -27.572 -4.851 49.574 1.00 79.64 ATOM 91 C HIS G 186 -26.921 -4.205 50.800 1.00 83.75 ATOM 92 O HIS G 186 -27.637 -3.764 51.706 1.00 82.74 ATOM 93 CB HIS G 186 -28.495 -5.999 49.996 1.00 78.56 ATOM 94 CG HIS G 186 -29.282 -6.578 48.861 1.00 81.47 ATOM 95 ND1 HIS G 186 -30.491 -6.060 48.444 1.00 86.83 ATOM 96 CD2 HIS G 186 -29.039 -7.645 48.063 1.00 78.17 ATOM 97 CE1 HIS G 186 -30.948 -6.769 47.425 1.00 80.61 ATOM 98 NE2 HIS G 186 -30.088 -7.740 47.176 1.00 77.17 ATOM 99 N GLU G 187 -25.599 -4.105 50.860 1.00 90.85 ATOM 100 CA GLU G 187 -24.975 -3.375 51.954 1.00 95.24 ATOM 101 C GLU G 187 -23.853 -2.530 51.359 1.00 95.10 ATOM 102 O GLU G 187 -23.189 -2.956 50.408 1.00 89.80 ATOM 103 CB GLU G 187 -24.499 -4.331 53.070 1.00 98.70 ATOM 104 CG GLU G 187 -23.059 -4.805 53.055 1.00104.52 ATOM 105 CD GLU G 187 -22.633 -5.467 54.383 1.00112.34 ATOM 106 OE1 GLU G 187 -23.447 -5.535 55.346 1.00115.52 ATOM 107 OE2 GLU G 187 -21.463 -5.914 54.459 1.00114.64 ATOM 108 N ARG G 188 -23.735 -1.280 51.820 1.00 79.43 ATOM 109 CA ARG G 188 -22.784 -0.358 51.202 1.00 72.45 ATOM 110 C ARG G 188 -21.348 -0.855 51.306 1.00 74.04 ATOM 111 O ARG G 188 -20.541 -0.613 50.394 1.00 72.60 ATOM 112 CB ARG G 188 -22.902 1.026 51.827 1.00 70.41 ATOM 113 CG ARG G 188 -21.833 1.941 51.331 1.00 70.99 ATOM 114 CD ARG G 188 -22.070 3.364 51.751 1.00 72.23 ATOM 115 NE ARG G 188 -21.079 4.256 51.163 1.00 75.59 ATOM 116 CZ ARG G 188 -21.108 4.641 49.896 1.00 75.74 ATOM 117 NH1 ARG G 188 -22.085 4.207 49.101 1.00 69.85 ATOM 118 NH2 ARG G 188 -20.169 5.459 49.438 1.00 78.64 ATOM 119 N TYR G 189 -21.004 -1.533 52.400 1.00 72.38 ATOM 120 CA TYR G 189 -19.647 -2.042 52.552 1.00 73.94 ATOM 121 C TYR G 189 -19.328 -3.050 51.469 1.00 75.94 ATOM 122 O TYR G 189 -18.271 -2.985 50.831 1.00 80.53 ATOM 123 CB TYR G 189 -19.466 -2.701 53.911 1.00 80.38 ATOM 124 CG TYR G 189 -18.111 -3.331 54.109 1.00 81.41 ATOM 125 CD1 TYR G 189 -16.952 -2.566 54.010 1.00 82.10 ATOM 126 CD2 TYR G 189 -17.988 -4.688 54.387 1.00 80.04 ATOM 127 CE1 TYR G 189 -15.706 -3.125 54.210 1.00 84.53 ATOM 128 CE2 TYR G 189 -16.746 -5.259 54.576 1.00 83.27 ATOM 129 CZ TYR G 189 -15.606 -4.471 54.490 1.00 85.69 ATOM 130 OH TYR G 189 -14.362 -5.026 54.685 1.00 89.17 ATOM 131 N ALA G 190 -20.221 -4.027 51.286 1.00 81.73 ATOM 132 CA ALA G 190 -19.979 -5.068 50.299 1.00 80.90 ATOM 133 C ALA G 190 -19.830 -4.458 48.921 1.00 85.22 ATOM 134 O ALA G 190 -18.964 -4.878 48.140 1.00 89.04 ATOM 135 CB ALA G 190 -21.117 -6.086 50.299 1.00 79.50 ATOM 136 N LEU G 191 -20.641 -3.434 48.631 1.00 75.31 ATOM 137 CA LEU G 191 -20.607 -2.781 47.331 1.00 72.72 ATOM 138 C LEU G 191 -19.261 -2.127 47.079 1.00 74.12 ATOM 139 O LEU G 191 -18.639 -2.356 46.034 1.00 73.55 ATOM 140 CB LEU G 191 -21.726 -1.747 47.237 1.00 70.79 ATOM 141 CG LEU G 191 -21.643 -0.833 46.019 1.00 71.64 ATOM 142 CD1 LEU G 191 -22.962 -0.841 45.288 1.00 66.52 ATOM 143 CD2 LEU G 191 -21.285 0.572 46.438 1.00 72.19 ATOM 144 N ILE G 192 -18.798 -1.299 48.028 1.00 67.97 ATOM 145 CA ILE G 192 -17.535 -0.593 47.829 1.00 67.58 ATOM 146 C ILE G 192 -16.373 -1.570 47.794 1.00 73.01 ATOM 147 O ILE G 192 -15.381 -1.349 47.083 1.00 76.85 ATOM 148 CB ILE G 192 -17.311 0.472 48.904 1.00 67.82 ATOM 149 CG1 ILE G 192 -18.482 1.443 48.926 1.00 68.09 ATOM 150 CG2 ILE G 192 -16.010 1.212 48.620 1.00 70.80 ATOM 151 CD1 ILE G 192 -18.481 2.373 47.786 1.00 70.00 ATOM 152 N GLN G 193 -16.433 -2.625 48.607 1.00 83.85 ATOM 153 CA GLN G 193 -15.352 -3.599 48.590 1.00 91.42 ATOM 154 C GLN G 193 -15.323 -4.297 47.245 1.00 96.10 ATOM 155 O GLN G 193 -14.247 -4.551 46.689 1.00100.83 ATOM 156 CB GLN G 193 -15.497 -4.593 49.746 1.00 95.12 ATOM 157 CG GLN G 193 -14.963 -4.063 51.067 1.00 93.77 ATOM 158 CD GLN G 193 -13.476 -3.800 51.016 1.00 97.54 ATOM 159 OE1 GLN G 193 -12.664 -4.733 51.055 1.00105.23 ATOM 160 NE2 GLN G 193 -13.110 -2.538 50.840 1.00 93.26 ATOM 161 N HIS G 194 -16.503 -4.619 46.708 1.00 95.32 ATOM 162 CA HIS G 194 -16.544 -5.275 45.412 1.00 93.05 ATOM 163 C HIS G 194 -15.978 -4.399 44.318 1.00 92.65 ATOM 164 O HIS G 194 -15.343 -4.903 43.389 1.00 98.42 ATOM 165 CB HIS G 194 -17.958 -5.710 45.048 1.00 91.49 ATOM 166 CG HIS G 194 -18.122 -5.985 43.591 1.00 94.16 ATOM 167 ND1 HIS G 194 -17.172 -6.672 42.864 1.00 99.74 ATOM 168 CD2 HIS G 194 -19.137 -5.722 42.733 1.00 94.97 ATOM 169 CE1 HIS G 194 -17.570 -6.771 41.608 1.00102.81 ATOM 170 NE2 HIS G 194 -18.767 -6.219 41.506 1.00 99.92 ATOM 171 N GLN G 195 -16.175 -3.097 44.399 1.00 80.85 ATOM 172 CA GLN G 195 -15.752 -2.241 43.296 1.00 88.32 ATOM 173 C GLN G 195 -14.235 -2.291 43.118 1.00 95.55 ATOM 174 O GLN G 195 -13.588 -1.257 42.945 1.00101.32 ATOM 175 CB GLN G 195 -16.261 -0.817 43.483 1.00 92.86 ATOM 176 CG GLN G 195 -17.780 -0.764 43.588 1.00 92.74 ATOM 177 CD GLN G 195 -18.364 0.609 43.278 1.00 97.55 ATOM 178 OE1 GLN G 195 -17.671 1.624 43.320 1.00101.57 ATOM 179 NE2 GLN G 195 -19.646 0.637 42.939 1.00 95.83 ATOM 180 N LYS G 196 -13.666 -3.500 43.183 1.00110.14 ATOM 181 CA LYS G 196 -12.255 -3.818 42.988 1.00113.34 ATOM 182 C LYS G 196 -12.178 -5.269 42.512 1.00113.49 ATOM 183 O LYS G 196 -13.049 -6.076 42.848 1.00108.21 ATOM 184 CB LYS G 196 -11.427 -3.647 44.273 1.00113.92 ATOM 185 CG LYS G 196 -11.898 -2.575 45.246 1.00112.32 ATOM 186 CD LYS G 196 -11.401 -1.192 44.864 1.00115.45 ATOM 187 CE LYS G 196 -9.921 -1.220 44.536 1.00121.79 ATOM 188 NZ LYS G 196 -9.292 0.131 44.593 1.00127.14 ATOM 189 N SER G 197 -11.157 -5.614 41.720 1.00134.83 ATOM 190 CA SER G 197 -10.103 -4.715 41.270 1.00142.73 ATOM 191 C SER G 197 -10.670 -3.748 40.261 1.00145.16 ATOM 192 O SER G 197 -10.339 -2.569 40.291 1.00148.84 ATOM 193 CB SER G 197 -8.927 -5.507 40.672 1.00146.75 ATOM 194 N HIS G 198 -11.588 -4.252 39.430 1.00124.63 ATOM 195 CA HIS G 198 -12.112 -3.512 38.281 1.00124.17 ATOM 196 C HIS G 198 -11.132 -2.509 37.646 1.00130.85 ATOM 197 O HIS G 198 -10.873 -1.423 38.176 1.00131.17 ATOM 198 CB HIS G 198 -13.428 -2.806 38.651 1.00114.57 ATOM 199 CG HIS G 198 -14.601 -3.736 38.779 1.00106.89 ATOM 200 ND1 HIS G 198 -15.908 -3.313 38.640 1.00 95.48 ATOM 201 CD2 HIS G 198 -14.658 -5.074 38.970 1.00108.70 ATOM 202 CE1 HIS G 198 -16.718 -4.347 38.768 1.00 92.00 ATOM 203 NE2 HIS G 198 -15.987 -5.427 38.968 1.00101.29 ATOM 204 ZN ZN G -18.581 -4.727 39.668 1.00 85.11 TER