HEADER DNA BINDING PROTEIN 31-DEC-69 5ZB8 TITLE Crystal structure of the novel lesion-specific endonuclease PfuEndoQ TITLE 2 from Pyrococcus furiosus COMPND MOL_ID: 1; COMPND 2 MOLECULE: PfuEndoQ; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.50 ANGSTORMS DBREF 5ZB8 B 3 400 UNP I6V2I0 I6V2I0_9EUR 3 400 SEQRES 1 B 31 THR ALA CYS SER ARG CYS TYR THR LYS TYR THR LEU GLN SEQRES 2 B 31 ASP ALA VAL SER LEU SER TRP LYS CYS PRO LYS CYS GLY SEQRES 3 B 31 GLY ILE ILE LYS LYS ATOM 1 N THR B 247 16.621 32.571 -15.004 1.00 30.24 ATOM 2 CA THR B 247 15.601 32.769 -13.983 1.00 31.53 ATOM 3 C THR B 247 14.528 33.705 -14.523 1.00 38.32 ATOM 4 O THR B 247 14.830 34.827 -14.945 1.00 40.14 ATOM 5 CB THR B 247 16.222 33.341 -12.711 1.00 35.14 ATOM 6 OG1 THR B 247 17.220 32.440 -12.214 1.00 34.29 ATOM 7 CG2 THR B 247 15.161 33.549 -11.646 1.00 35.69 ATOM 8 N ALA B 248 13.278 33.248 -14.516 1.00 31.85 ATOM 9 CA ALA B 248 12.198 34.014 -15.115 1.00 35.58 ATOM 10 C ALA B 248 10.889 33.682 -14.418 1.00 38.88 ATOM 11 O ALA B 248 10.760 32.656 -13.746 1.00 36.23 ATOM 12 CB ALA B 248 12.080 33.739 -16.619 1.00 33.29 ATOM 13 N CYS B 249 9.915 34.571 -14.592 1.00 34.56 ATOM 14 CA CYS B 249 8.577 34.331 -14.074 1.00 39.45 ATOM 15 C CYS B 249 7.896 33.243 -14.892 1.00 35.90 ATOM 16 O CYS B 249 7.943 33.255 -16.125 1.00 34.02 ATOM 17 CB CYS B 249 7.756 35.618 -14.110 1.00 37.57 ATOM 18 SG CYS B 249 5.992 35.377 -13.812 1.00 40.36 ATOM 19 N SER B 250 7.263 32.295 -14.204 1.00 32.01 ATOM 20 CA SER B 250 6.601 31.199 -14.899 1.00 32.42 ATOM 21 C SER B 250 5.292 31.614 -15.555 1.00 35.25 ATOM 22 O SER B 250 4.650 30.771 -16.192 1.00 40.35 ATOM 23 CB SER B 250 6.352 30.043 -13.930 1.00 34.25 ATOM 24 OG SER B 250 5.574 30.468 -12.825 1.00 40.93 ATOM 25 N ARG B 251 4.880 32.875 -15.419 1.00 38.97 ATOM 26 CA ARG B 251 3.644 33.369 -16.010 1.00 37.82 ATOM 27 C ARG B 251 3.878 34.311 -17.182 1.00 42.11 ATOM 28 O ARG B 251 3.311 34.105 -18.260 1.00 32.02 ATOM 29 CB ARG B 251 2.789 34.070 -14.941 1.00 36.10 ATOM 30 CG ARG B 251 1.607 34.835 -15.515 1.00 37.27 ATOM 31 CD ARG B 251 0.294 34.498 -14.825 1.00 43.65 ATOM 32 NE ARG B 251 0.166 35.085 -13.495 1.00 46.64 ATOM 33 CZ ARG B 251 -0.196 34.404 -12.412 1.00 42.36 ATOM 34 NH1 ARG B 251 -0.476 33.110 -12.503 1.00 40.48 ATOM 35 NH2 ARG B 251 -0.292 35.019 -11.242 1.00 45.36 ATOM 36 N CYS B 252 4.697 35.350 -17.007 1.00 40.68 ATOM 37 CA CYS B 252 4.955 36.312 -18.070 1.00 38.58 ATOM 38 C CYS B 252 6.344 36.184 -18.680 1.00 41.25 ATOM 39 O CYS B 252 6.635 36.878 -19.661 1.00 46.70 ATOM 40 CB CYS B 252 4.762 37.745 -17.554 1.00 38.23 ATOM 41 SG CYS B 252 6.036 38.302 -16.401 1.00 40.53 ATOM 42 N TYR B 253 7.206 35.337 -18.117 1.00 39.89 ATOM 43 CA TYR B 253 8.508 34.988 -18.677 1.00 35.63 ATOM 44 C TYR B 253 9.477 36.162 -18.721 1.00 38.56 ATOM 45 O TYR B 253 10.443 36.139 -19.490 1.00 37.31 ATOM 46 CB TYR B 253 8.357 34.371 -20.072 1.00 31.36 ATOM 47 CG TYR B 253 7.313 33.282 -20.106 1.00 35.05 ATOM 48 CD1 TYR B 253 7.508 32.090 -19.419 1.00 29.52 ATOM 49 CD2 TYR B 253 6.126 33.449 -20.807 1.00 36.16 ATOM 50 CE1 TYR B 253 6.554 31.092 -19.437 1.00 34.11 ATOM 51 CE2 TYR B 253 5.166 32.456 -20.833 1.00 34.74 ATOM 52 CZ TYR B 253 5.386 31.280 -20.147 1.00 38.75 ATOM 53 OH TYR B 253 4.430 30.292 -20.173 1.00 42.12 ATOM 54 N THR B 254 9.246 37.188 -17.906 1.00 42.80 ATOM 55 CA THR B 254 10.229 38.251 -17.748 1.00 37.99 ATOM 56 C THR B 254 11.442 37.712 -17.002 1.00 51.48 ATOM 57 O THR B 254 11.303 37.073 -15.955 1.00 53.47 ATOM 58 CB THR B 254 9.625 39.432 -16.989 1.00 42.53 ATOM 59 OG1 THR B 254 8.465 39.906 -17.683 1.00 49.73 ATOM 60 CG2 THR B 254 10.635 40.563 -16.869 1.00 43.55 ATOM 61 N LYS B 255 12.631 37.961 -17.541 1.00 46.43 ATOM 62 CA LYS B 255 13.845 37.450 -16.924 1.00 41.95 ATOM 63 C LYS B 255 14.207 38.274 -15.695 1.00 41.28 ATOM 64 O LYS B 255 13.946 39.478 -15.626 1.00 45.31 ATOM 65 CB LYS B 255 15.010 37.461 -17.916 1.00 36.72 ATOM 66 CG LYS B 255 14.664 36.960 -19.310 1.00 44.88 ATOM 67 CD LYS B 255 14.010 35.588 -19.286 1.00 44.47 ATOM 68 CE LYS B 255 13.575 35.180 -20.686 1.00 50.90 ATOM 69 NZ LYS B 255 12.603 34.053 -20.666 1.00 52.08 ATOM 70 N TYR B 256 14.808 37.605 -14.714 1.00 40.03 ATOM 71 CA TYR B 256 15.273 38.251 -13.496 1.00 42.83 ATOM 72 C TYR B 256 16.615 37.660 -13.101 1.00 49.09 ATOM 73 O TYR B 256 16.854 36.464 -13.285 1.00 48.65 ATOM 74 CB TYR B 256 14.279 38.077 -12.339 1.00 43.82 ATOM 75 CG TYR B 256 12.956 38.777 -12.541 1.00 51.95 ATOM 76 CD1 TYR B 256 12.796 40.112 -12.194 1.00 53.44 ATOM 77 CD2 TYR B 256 11.866 38.100 -13.068 1.00 47.13 ATOM 78 CE1 TYR B 256 11.587 40.754 -12.374 1.00 51.71 ATOM 79 CE2 TYR B 256 10.653 38.733 -13.252 1.00 44.08 ATOM 80 CZ TYR B 256 10.518 40.060 -12.903 1.00 49.14 ATOM 81 OH TYR B 256 9.311 40.694 -13.085 1.00 48.58 ATOM 82 N THR B 257 17.491 38.503 -12.565 1.00 47.81 ATOM 83 CA THR B 257 18.712 37.995 -11.966 1.00 48.76 ATOM 84 C THR B 257 18.376 37.183 -10.721 1.00 49.17 ATOM 85 O THR B 257 17.340 37.385 -10.081 1.00 51.80 ATOM 86 CB THR B 257 19.659 39.140 -11.603 1.00 52.83 ATOM 87 OG1 THR B 257 19.083 39.928 -10.553 1.00 55.50 ATOM 88 CG2 THR B 257 19.915 40.028 -12.812 1.00 48.86 ATOM 89 N LEU B 258 19.262 36.241 -10.388 1.00 47.87 ATOM 90 CA LEU B 258 19.117 35.516 -9.130 1.00 54.07 ATOM 91 C LEU B 258 19.049 36.476 -7.951 1.00 67.49 ATOM 92 O LEU B 258 18.366 36.201 -6.958 1.00 69.82 ATOM 93 CB LEU B 258 20.275 34.534 -8.949 1.00 51.28 ATOM 94 CG LEU B 258 20.272 33.704 -7.662 1.00 51.74 ATOM 95 CD1 LEU B 258 19.153 32.673 -7.686 1.00 47.52 ATOM 96 CD2 LEU B 258 21.621 33.038 -7.436 1.00 53.56 ATOM 97 N GLN B 259 19.736 37.615 -8.053 1.00 72.28 ATOM 98 CA GLN B 259 19.696 38.614 -6.993 1.00 74.71 ATOM 99 C GLN B 259 18.305 39.228 -6.867 1.00 66.27 ATOM 100 O GLN B 259 17.775 39.370 -5.758 1.00 59.93 ATOM 101 CB GLN B 259 20.744 39.694 -7.261 1.00 84.84 ATOM 102 CG GLN B 259 22.142 39.154 -7.545 1.00 89.69 ATOM 103 CD GLN B 259 22.489 39.165 -9.023 1.00 92.03 ATOM 104 OE1 GLN B 259 22.313 38.167 -9.724 1.00 88.97 ATOM 105 NE2 GLN B 259 22.994 40.297 -9.502 1.00 94.57 ATOM 106 N ASP B 260 17.694 39.594 -7.997 1.00 67.04 ATOM 107 CA ASP B 260 16.377 40.223 -7.954 1.00 69.10 ATOM 108 C ASP B 260 15.310 39.260 -7.446 1.00 64.07 ATOM 109 O ASP B 260 14.414 39.661 -6.697 1.00 67.08 ATOM 110 CB ASP B 260 15.993 40.747 -9.339 1.00 71.09 ATOM 111 CG ASP B 260 16.821 41.944 -9.763 1.00 79.29 ATOM 112 OD1 ASP B 260 17.339 42.656 -8.877 1.00 83.96 ATOM 113 OD2 ASP B 260 16.949 42.176 -10.984 1.00 79.81 ATOM 114 N ALA B 261 15.395 37.988 -7.838 1.00 60.94 ATOM 115 CA ALA B 261 14.297 37.057 -7.590 1.00 62.03 ATOM 116 C ALA B 261 14.157 36.730 -6.108 1.00 69.20 ATOM 117 O ALA B 261 13.073 36.879 -5.531 1.00 74.53 ATOM 118 CB ALA B 261 14.503 35.780 -8.405 1.00 44.76 ATOM 119 N VAL B 262 15.242 36.278 -5.474 1.00 67.43 ATOM 120 CA VAL B 262 15.156 35.813 -4.094 1.00 72.94 ATOM 121 C VAL B 262 14.820 36.946 -3.130 1.00 75.83 ATOM 122 O VAL B 262 14.279 36.694 -2.046 1.00 73.78 ATOM 123 CB VAL B 262 16.465 35.102 -3.697 1.00 72.23 ATOM 124 CG1 VAL B 262 17.620 36.090 -3.644 1.00 75.02 ATOM 125 CG2 VAL B 262 16.302 34.368 -2.370 1.00 68.37 ATOM 126 N SER B 263 15.105 38.196 -3.500 1.00 72.13 ATOM 127 CA SER B 263 14.701 39.327 -2.673 1.00 74.73 ATOM 128 C SER B 263 13.200 39.578 -2.718 1.00 78.73 ATOM 129 O SER B 263 12.706 40.417 -1.957 1.00 86.30 ATOM 130 CB SER B 263 15.450 40.590 -3.104 1.00 77.46 ATOM 131 OG SER B 263 15.125 40.953 -4.435 1.00 78.16 ATOM 132 N LEU B 264 12.470 38.876 -3.585 1.00 70.36 ATOM 133 CA LEU B 264 11.027 39.025 -3.714 1.00 68.85 ATOM 134 C LEU B 264 10.273 37.784 -3.259 1.00 69.02 ATOM 135 O LEU B 264 9.070 37.674 -3.519 1.00 70.45 ATOM 136 CB LEU B 264 10.660 39.345 -5.165 1.00 58.95 ATOM 137 CG LEU B 264 11.492 40.411 -5.876 1.00 65.42 ATOM 138 CD1 LEU B 264 11.181 40.421 -7.365 1.00 56.99 ATOM 139 CD2 LEU B 264 11.262 41.783 -5.264 1.00 71.78 ATOM 140 N SER B 265 10.951 36.849 -2.589 1.00 67.35 ATOM 141 CA SER B 265 10.388 35.531 -2.285 1.00 74.10 ATOM 142 C SER B 265 9.847 34.864 -3.547 1.00 73.08 ATOM 143 O SER B 265 8.871 34.111 -3.502 1.00 71.70 ATOM 144 CB SER B 265 9.307 35.617 -1.204 1.00 79.62 ATOM 145 OG SER B 265 9.862 36.013 0.039 1.00 84.39 ATOM 146 N TRP B 266 10.488 35.156 -4.681 1.00 71.03 ATOM 147 CA TRP B 266 10.136 34.591 -5.983 1.00 67.97 ATOM 148 C TRP B 266 8.702 34.961 -6.371 1.00 65.18 ATOM 149 O TRP B 266 7.842 34.108 -6.600 1.00 64.08 ATOM 150 CB TRP B 266 10.358 33.076 -5.987 1.00 65.73 ATOM 151 CG TRP B 266 11.746 32.709 -5.557 1.00 64.72 ATOM 152 CD1 TRP B 266 12.198 32.570 -4.277 1.00 68.20 ATOM 153 CD2 TRP B 266 12.868 32.450 -6.409 1.00 58.33 ATOM 154 NE1 TRP B 266 13.530 32.235 -4.278 1.00 65.13 ATOM 155 CE2 TRP B 266 13.965 32.154 -5.575 1.00 59.10 ATOM 156 CE3 TRP B 266 13.051 32.435 -7.795 1.00 51.36 ATOM 157 CZ2 TRP B 266 15.226 31.847 -6.082 1.00 52.61 ATOM 158 CZ3 TRP B 266 14.303 32.129 -8.296 1.00 47.42 ATOM 159 CH2 TRP B 266 15.375 31.841 -7.442 1.00 51.30 ATOM 160 N LYS B 267 8.466 36.270 -6.447 1.00 62.16 ATOM 161 CA LYS B 267 7.168 36.827 -6.810 1.00 62.35 ATOM 162 C LYS B 267 7.383 37.892 -7.873 1.00 60.98 ATOM 163 O LYS B 267 8.083 38.881 -7.630 1.00 64.76 ATOM 164 CB LYS B 267 6.461 37.421 -5.588 1.00 70.76 ATOM 165 CG LYS B 267 4.986 37.722 -5.796 1.00 72.07 ATOM 166 CD LYS B 267 4.149 36.453 -5.748 1.00 70.42 ATOM 167 CE LYS B 267 2.664 36.773 -5.788 1.00 74.97 ATOM 168 NZ LYS B 267 2.271 37.711 -4.701 1.00 80.42 ATOM 169 N CYS B 268 6.781 37.695 -9.039 1.00 57.10 ATOM 170 CA CYS B 268 6.962 38.633 -10.142 1.00 55.25 ATOM 171 C CYS B 268 6.236 39.941 -9.850 1.00 58.44 ATOM 172 O CYS B 268 5.037 39.926 -9.550 1.00 61.33 ATOM 173 CB CYS B 268 6.446 38.027 -11.444 1.00 46.33 ATOM 174 SG CYS B 268 6.576 39.125 -12.873 1.00 49.91 ATOM 175 N PRO B 269 6.918 41.089 -9.925 1.00 62.10 ATOM 176 CA PRO B 269 6.219 42.368 -9.733 1.00 64.28 ATOM 177 C PRO B 269 5.383 42.798 -10.927 1.00 60.99 ATOM 178 O PRO B 269 4.483 43.632 -10.757 1.00 65.49 ATOM 179 CB PRO B 269 7.366 43.356 -9.478 1.00 60.69 ATOM 180 CG PRO B 269 8.529 42.758 -10.197 1.00 57.78 ATOM 181 CD PRO B 269 8.374 41.265 -10.064 1.00 59.46 ATOM 182 N LYS B 270 5.644 42.259 -12.120 1.00 56.66 ATOM 183 CA LYS B 270 4.871 42.636 -13.300 1.00 61.24 ATOM 184 C LYS B 270 3.479 42.015 -13.294 1.00 62.87 ATOM 185 O LYS B 270 2.495 42.695 -13.604 1.00 65.89 ATOM 186 CB LYS B 270 5.622 42.228 -14.570 1.00 67.14 ATOM 187 CG LYS B 270 4.803 42.354 -15.846 1.00 74.15 ATOM 188 CD LYS B 270 5.630 42.023 -17.075 1.00 76.35 ATOM 189 CE LYS B 270 4.808 42.152 -18.347 1.00 76.39 ATOM 190 NZ LYS B 270 5.639 41.975 -19.571 1.00 75.71 ATOM 191 N CYS B 271 3.375 40.731 -12.944 1.00 57.03 ATOM 192 CA CYS B 271 2.108 40.019 -13.023 1.00 52.97 ATOM 193 C CYS B 271 1.751 39.221 -11.778 1.00 50.40 ATOM 194 O CYS B 271 0.632 38.701 -11.710 1.00 50.25 ATOM 195 CB CYS B 271 2.108 39.062 -14.222 1.00 46.05 ATOM 196 SG CYS B 271 3.121 37.590 -13.965 1.00 44.31 ATOM 197 N GLY B 272 2.651 39.095 -10.806 1.00 51.29 ATOM 198 CA GLY B 272 2.362 38.320 -9.618 1.00 52.11 ATOM 199 C GLY B 272 2.606 36.834 -9.744 1.00 48.97 ATOM 200 O GLY B 272 2.176 36.077 -8.866 1.00 53.35 ATOM 201 N GLY B 273 3.280 36.389 -10.804 1.00 45.89 ATOM 202 CA GLY B 273 3.524 34.977 -10.995 1.00 43.04 ATOM 203 C GLY B 273 4.710 34.469 -10.198 1.00 43.87 ATOM 204 O GLY B 273 5.484 35.227 -9.614 1.00 45.11 ATOM 205 N ILE B 274 4.844 33.147 -10.180 1.00 47.31 ATOM 206 CA ILE B 274 5.931 32.495 -9.459 1.00 49.38 ATOM 207 C ILE B 274 7.176 32.500 -10.334 1.00 44.10 ATOM 208 O ILE B 274 7.115 32.164 -11.523 1.00 37.86 ATOM 209 CB ILE B 274 5.538 31.063 -9.061 1.00 52.45 ATOM 210 CG1 ILE B 274 4.290 31.074 -8.176 1.00 55.38 ATOM 211 CG2 ILE B 274 6.686 30.375 -8.343 1.00 37.90 ATOM 212 CD1 ILE B 274 3.755 29.693 -7.858 1.00 56.87 ATOM 213 N ILE B 275 8.306 32.885 -9.752 1.00 46.50 ATOM 214 CA ILE B 275 9.570 32.946 -10.475 1.00 37.30 ATOM 215 C ILE B 275 10.309 31.629 -10.283 1.00 45.19 ATOM 216 O ILE B 275 10.478 31.159 -9.151 1.00 49.36 ATOM 217 CB ILE B 275 10.419 34.135 -9.995 1.00 39.87 ATOM 218 CG1 ILE B 275 9.643 35.443 -10.169 1.00 47.94 ATOM 219 CG2 ILE B 275 11.727 34.195 -10.758 1.00 38.51 ATOM 220 CD1 ILE B 275 10.409 36.671 -9.741 1.00 45.11 ATOM 221 N LYS B 276 10.741 31.028 -11.388 1.00 37.71 ATOM 222 CA LYS B 276 11.442 29.750 -11.371 1.00 33.73 ATOM 223 C LYS B 276 12.933 29.986 -11.569 1.00 32.95 ATOM 224 O LYS B 276 13.332 30.747 -12.457 1.00 32.27 ATOM 225 CB LYS B 276 10.910 28.824 -12.467 1.00 35.92 ATOM 226 CG LYS B 276 9.425 28.505 -12.375 1.00 43.34 ATOM 227 CD LYS B 276 9.189 27.152 -11.722 1.00 47.50 ATOM 228 CE LYS B 276 7.890 26.516 -12.204 1.00 49.36 ATOM 229 NZ LYS B 276 6.687 27.302 -11.818 1.00 51.07 ATOM 230 N LYS B 277 13.752 29.331 -10.749 1.00 30.98 ATOM 231 CA LYS B 277 15.196 29.483 -10.868 1.00 29.92 ATOM 232 C LYS B 277 15.698 28.865 -12.168 1.00 31.19 ATOM 233 O LYS B 277 15.301 27.759 -12.546 1.00 29.08 ATOM 234 CB LYS B 277 15.908 28.839 -9.678 1.00 32.21 ATOM 235 CG LYS B 277 17.423 29.020 -9.704 1.00 33.51 ATOM 236 CD LYS B 277 18.120 28.185 -8.642 1.00 32.24 ATOM 237 CE LYS B 277 17.732 28.620 -7.241 1.00 36.76 ATOM 238 NZ LYS B 277 18.493 27.870 -6.200 1.00 38.98 ATOM 239 ZN ZN B 5.386 37.660 -14.276 1.00 40.47 TER