HEADER PHOTOSYNTHESIS 31-DEC-69 6JLL TITLE XFEL structure of cyanobacterial photosystem II (2F state, dataset1) COMPND MOL_ID: 17; COMPND 2 MOLECULE: Photosystem II reaction center protein Ycf12; COMPND 3 CHAIN: Y, y; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.15 ANGSTORMS DBREF 6JLL y 17 46 UNP D0VWR3 YCF12_THEVL 1 30 SEQRES 1 y 29 VAL ILE ALA GLN LEU THR MET ILE ALA MET ILE GLY ILE SEQRES 2 y 29 ALA GLY PRO MET ILE ILE PHE LEU LEU ALA VAL ARG ARG SEQRES 3 y 29 GLY ASN LEU ATOM 1 N VAL y 2 4.839 52.812 18.758 1.00104.62 ATOM 2 CA VAL y 2 5.198 51.417 18.986 1.00105.27 ATOM 3 C VAL y 2 6.026 51.288 20.268 1.00107.28 ATOM 4 O VAL y 2 6.543 50.215 20.593 1.00100.67 ATOM 5 CB VAL y 2 5.981 50.832 17.788 1.00103.02 ATOM 6 CG1 VAL y 2 5.844 49.319 17.747 1.00 96.51 ATOM 7 CG2 VAL y 2 5.475 51.428 16.484 1.00106.46 ATOM 8 N ILE y 3 6.144 52.398 20.991 1.00111.06 ATOM 9 CA ILE y 3 6.844 52.424 22.270 1.00116.69 ATOM 10 C ILE y 3 5.910 51.950 23.380 1.00119.26 ATOM 11 O ILE y 3 6.293 51.145 24.240 1.00118.20 ATOM 12 CB ILE y 3 7.382 53.843 22.593 1.00113.27 ATOM 13 CG1 ILE y 3 8.733 54.068 21.909 1.00109.77 ATOM 14 CG2 ILE y 3 7.510 54.063 24.098 1.00110.68 ATOM 15 CD1 ILE y 3 9.461 55.312 22.385 1.00109.68 ATOM 16 N ALA y 4 4.675 52.441 23.340 1.00118.81 ATOM 17 CA ALA y 4 3.663 52.063 24.316 1.00122.79 ATOM 18 C ALA y 4 3.295 50.586 24.190 1.00124.09 ATOM 19 O ALA y 4 3.000 49.932 25.188 1.00130.96 ATOM 20 CB ALA y 4 2.428 52.934 24.159 1.00123.53 ATOM 21 N GLN y 5 3.316 50.064 22.966 1.00114.71 ATOM 22 CA GLN y 5 3.024 48.651 22.725 1.00108.25 ATOM 23 C GLN y 5 4.072 47.737 23.376 1.00108.58 ATOM 24 O GLN y 5 3.730 46.801 24.113 1.00105.50 ATOM 25 CB GLN y 5 2.937 48.374 21.218 1.00 98.71 ATOM 26 CG GLN y 5 1.621 48.805 20.587 1.00 94.21 ATOM 27 CD GLN y 5 1.714 48.973 19.083 1.00 94.75 ATOM 28 OE1 GLN y 5 2.745 49.389 18.554 1.00 93.12 ATOM 29 NE2 GLN y 5 0.632 48.649 18.383 1.00 93.41 ATOM 30 N LEU y 6 5.345 48.023 23.106 1.00104.41 ATOM 31 CA LEU y 6 6.450 47.258 23.677 1.00 98.06 ATOM 32 C LEU y 6 6.506 47.393 25.202 1.00 98.95 ATOM 33 O LEU y 6 6.698 46.400 25.909 1.00 98.73 ATOM 34 CB LEU y 6 7.777 47.689 23.045 1.00 90.23 ATOM 35 CG LEU y 6 7.946 47.229 21.591 1.00 82.02 ATOM 36 CD1 LEU y 6 9.329 47.559 21.045 1.00 74.29 ATOM 37 CD2 LEU y 6 7.662 45.736 21.472 1.00 76.42 ATOM 38 N THR y 7 6.328 48.615 25.701 1.00 95.54 ATOM 39 CA THR y 7 6.263 48.857 27.142 1.00 91.47 ATOM 40 C THR y 7 5.144 48.042 27.798 1.00 96.14 ATOM 41 O THR y 7 5.347 47.404 28.840 1.00 96.32 ATOM 42 CB THR y 7 6.038 50.355 27.456 1.00 81.66 ATOM 43 OG1 THR y 7 6.961 51.151 26.703 1.00 75.61 ATOM 44 CG2 THR y 7 6.227 50.625 28.947 1.00 74.57 ATOM 45 N MET y 8 3.967 48.062 27.178 1.00 98.84 ATOM 46 CA MET y 8 2.815 47.341 27.706 1.00100.96 ATOM 47 C MET y 8 3.066 45.840 27.734 1.00102.90 ATOM 48 O MET y 8 2.877 45.198 28.770 1.00105.52 ATOM 49 CB MET y 8 1.555 47.646 26.890 1.00 98.20 ATOM 50 CG MET y 8 0.885 48.964 27.259 1.00103.95 ATOM 51 SD MET y 8 1.459 49.644 28.832 1.00141.20 ATOM 52 CE MET y 8 2.431 51.045 28.275 1.00 95.64 ATOM 53 N ILE y 9 3.508 45.282 26.610 1.00101.20 ATOM 54 CA ILE y 9 3.759 43.842 26.549 1.00100.52 ATOM 55 C ILE y 9 4.932 43.462 27.461 1.00101.08 ATOM 56 O ILE y 9 5.102 42.295 27.813 1.00103.20 ATOM 57 CB ILE y 9 4.022 43.359 25.090 1.00 82.08 ATOM 58 CG1 ILE y 9 4.080 41.821 25.006 1.00 79.07 ATOM 59 CG2 ILE y 9 5.292 43.978 24.525 1.00 77.16 ATOM 60 CD1 ILE y 9 2.945 41.095 25.722 1.00 71.25 ATOM 61 N ALA y 10 5.727 44.448 27.866 1.00 95.67 ATOM 62 CA ALA y 10 6.798 44.189 28.821 1.00 90.43 ATOM 63 C ALA y 10 6.257 44.119 30.254 1.00 87.66 ATOM 64 O ALA y 10 6.666 43.260 31.041 1.00 90.28 ATOM 65 CB ALA y 10 7.880 45.244 28.707 1.00 88.92 ATOM 66 N MET y 11 5.337 45.017 30.593 1.00 83.88 ATOM 67 CA MET y 11 4.730 44.992 31.922 1.00 82.72 ATOM 68 C MET y 11 3.901 43.726 32.099 1.00 83.76 ATOM 69 O MET y 11 4.035 42.989 33.090 1.00 86.62 ATOM 70 CB MET y 11 3.861 46.229 32.138 1.00 88.15 ATOM 71 CG MET y 11 4.571 47.540 31.835 1.00 90.24 ATOM 72 SD MET y 11 3.673 48.950 32.494 1.00139.42 ATOM 73 CE MET y 11 3.696 48.534 34.238 1.00 73.59 ATOM 74 N ILE y 12 3.044 43.494 31.112 1.00 80.53 ATOM 75 CA ILE y 12 2.194 42.319 31.042 1.00 71.54 ATOM 76 C ILE y 12 3.038 41.052 31.026 1.00 70.68 ATOM 77 O ILE y 12 2.751 40.089 31.736 1.00 81.46 ATOM 78 CB ILE y 12 1.289 42.389 29.789 1.00 72.56 ATOM 79 CG1 ILE y 12 0.172 43.409 30.011 1.00 78.62 ATOM 80 CG2 ILE y 12 0.698 41.035 29.444 1.00 65.08 ATOM 81 CD1 ILE y 12 -0.772 43.536 28.836 1.00 84.03 ATOM 82 N GLY y 13 4.098 41.073 30.226 1.00 68.92 ATOM 83 CA GLY y 13 4.984 39.935 30.083 1.00 69.60 ATOM 84 C GLY y 13 5.817 39.647 31.317 1.00 74.61 ATOM 85 O GLY y 13 6.324 38.536 31.489 1.00 81.40 ATOM 86 N ILE y 14 5.973 40.645 32.177 1.00 72.55 ATOM 87 CA ILE y 14 6.731 40.440 33.401 1.00 79.70 ATOM 88 C ILE y 14 5.802 40.010 34.534 1.00 79.95 ATOM 89 O ILE y 14 6.239 39.335 35.458 1.00 81.19 ATOM 90 CB ILE y 14 7.532 41.711 33.808 1.00 88.25 ATOM 91 CG1 ILE y 14 8.933 41.322 34.288 1.00 93.13 ATOM 92 CG2 ILE y 14 6.795 42.534 34.869 1.00 77.73 ATOM 93 CD1 ILE y 14 9.699 40.457 33.298 1.00 95.75 ATOM 94 N ALA y 15 4.521 40.371 34.443 1.00 80.51 ATOM 95 CA ALA y 15 3.545 40.048 35.495 1.00 75.86 ATOM 96 C ALA y 15 3.507 38.569 35.918 1.00 70.92 ATOM 97 O ALA y 15 3.361 38.273 37.097 1.00 71.43 ATOM 98 CB ALA y 15 2.155 40.483 35.059 1.00 73.08 ATOM 99 N GLY y 16 3.621 37.649 34.961 1.00 72.00 ATOM 100 CA GLY y 16 3.568 36.221 35.253 1.00 69.61 ATOM 101 C GLY y 16 4.773 35.688 36.019 1.00 70.52 ATOM 102 O GLY y 16 4.642 35.164 37.145 1.00 70.03 ATOM 103 N PRO y 17 5.967 35.808 35.411 1.00 72.29 ATOM 104 CA PRO y 17 7.213 35.451 36.092 1.00 73.79 ATOM 105 C PRO y 17 7.383 36.201 37.408 1.00 79.97 ATOM 106 O PRO y 17 8.053 35.696 38.302 1.00 79.43 ATOM 107 CB PRO y 17 8.288 35.859 35.084 1.00 67.04 ATOM 108 CG PRO y 17 7.619 35.710 33.769 1.00 65.94 ATOM 109 CD PRO y 17 6.208 36.180 34.007 1.00 69.49 ATOM 110 N MET y 18 6.784 37.383 37.520 1.00 81.87 ATOM 111 CA MET y 18 6.838 38.148 38.759 1.00 81.98 ATOM 112 C MET y 18 6.029 37.441 39.839 1.00 80.74 ATOM 113 O MET y 18 6.449 37.385 40.985 1.00 83.17 ATOM 114 CB MET y 18 6.330 39.580 38.544 1.00 76.61 ATOM 115 CG MET y 18 6.318 40.464 39.794 1.00 79.20 ATOM 116 SD MET y 18 7.922 40.592 40.615 1.00103.31 ATOM 117 CE MET y 18 9.018 40.895 39.225 1.00 96.60 ATOM 118 N ILE y 19 4.878 36.888 39.471 1.00 77.97 ATOM 119 CA ILE y 19 4.086 36.118 40.423 1.00 75.94 ATOM 120 C ILE y 19 4.864 34.872 40.851 1.00 72.18 ATOM 121 O ILE y 19 4.950 34.556 42.048 1.00 65.54 ATOM 122 CB ILE y 19 2.718 35.720 39.836 1.00 72.90 ATOM 123 CG1 ILE y 19 1.873 36.971 39.582 1.00 74.03 ATOM 124 CG2 ILE y 19 1.980 34.776 40.774 1.00 61.80 ATOM 125 CD1 ILE y 19 0.693 36.747 38.649 1.00 67.54 ATOM 126 N ILE y 20 5.456 34.177 39.881 1.00 69.50 ATOM 127 CA ILE y 20 6.253 33.001 40.234 1.00 71.48 ATOM 128 C ILE y 20 7.402 33.355 41.193 1.00 82.99 ATOM 129 O ILE y 20 7.583 32.707 42.225 1.00 86.89 ATOM 130 CB ILE y 20 6.822 32.314 38.993 1.00 72.33 ATOM 131 CG1 ILE y 20 5.685 31.725 38.152 1.00 71.23 ATOM 132 CG2 ILE y 20 7.817 31.237 39.396 1.00 72.21 ATOM 133 CD1 ILE y 20 4.578 31.084 38.975 1.00 73.45 ATOM 134 N PHE y 21 8.153 34.400 40.858 1.00 82.31 ATOM 135 CA PHE y 21 9.279 34.869 41.666 1.00 81.37 ATOM 136 C PHE y 21 8.864 35.304 43.076 1.00 80.24 ATOM 137 O PHE y 21 9.504 34.940 44.063 1.00 71.33 ATOM 138 CB PHE y 21 9.978 36.031 40.953 1.00 79.74 ATOM 139 CG PHE y 21 11.123 36.632 41.728 1.00 77.11 ATOM 140 CD1 PHE y 21 12.420 36.190 41.523 1.00 73.96 ATOM 141 CD2 PHE y 21 10.903 37.657 42.642 1.00 82.85 ATOM 142 CE1 PHE y 21 13.476 36.744 42.223 1.00 72.33 ATOM 143 CE2 PHE y 21 11.954 38.214 43.351 1.00 78.67 ATOM 144 CZ PHE y 21 13.244 37.757 43.139 1.00 78.17 ATOM 145 N LEU y 22 7.811 36.108 43.161 1.00 78.40 ATOM 146 CA LEU y 22 7.321 36.572 44.445 1.00 68.51 ATOM 147 C LEU y 22 6.945 35.391 45.331 1.00 80.91 ATOM 148 O LEU y 22 7.354 35.331 46.493 1.00 83.78 ATOM 149 CB LEU y 22 6.125 37.505 44.265 1.00 69.98 ATOM 150 CG LEU y 22 6.432 38.873 43.651 1.00 69.61 ATOM 151 CD1 LEU y 22 5.204 39.768 43.682 1.00 63.01 ATOM 152 CD2 LEU y 22 7.608 39.534 44.347 1.00 72.16 ATOM 153 N LEU y 23 6.185 34.442 44.787 1.00 85.62 ATOM 154 CA LEU y 23 5.803 33.276 45.585 1.00 81.24 ATOM 155 C LEU y 23 7.022 32.441 45.986 1.00 77.25 ATOM 156 O LEU y 23 7.126 32.007 47.127 1.00 77.48 ATOM 157 CB LEU y 23 4.785 32.420 44.833 1.00 75.46 ATOM 158 CG LEU y 23 3.384 33.022 44.940 1.00 68.62 ATOM 159 CD1 LEU y 23 2.410 32.404 43.957 1.00 69.12 ATOM 160 CD2 LEU y 23 2.884 32.861 46.352 1.00 63.60 ATOM 161 N ALA y 24 7.952 32.242 45.056 1.00 75.23 ATOM 162 CA ALA y 24 9.169 31.477 45.330 1.00 74.66 ATOM 163 C ALA y 24 10.029 32.125 46.408 1.00 85.09 ATOM 164 O ALA y 24 10.755 31.440 47.131 1.00 98.75 ATOM 165 CB ALA y 24 9.984 31.303 44.056 1.00 80.01 ATOM 166 N VAL y 25 9.952 33.446 46.509 1.00 79.63 ATOM 167 CA VAL y 25 10.727 34.173 47.498 1.00 77.94 ATOM 168 C VAL y 25 10.160 33.963 48.898 1.00 91.54 ATOM 169 O VAL y 25 10.887 33.593 49.819 1.00 90.85 ATOM 170 CB VAL y 25 10.772 35.682 47.184 1.00 73.20 ATOM 171 CG1 VAL y 25 11.154 36.466 48.416 1.00 69.09 ATOM 172 CG2 VAL y 25 11.757 35.954 46.061 1.00 81.08 ATOM 173 N ARG y 26 8.861 34.195 49.057 1.00 94.66 ATOM 174 CA ARG y 26 8.230 34.030 50.358 1.00 88.68 ATOM 175 C ARG y 26 7.746 32.594 50.573 1.00 89.23 ATOM 176 O ARG y 26 6.829 32.354 51.365 1.00 86.87 ATOM 177 CB ARG y 26 7.074 35.021 50.529 1.00 86.79 ATOM 178 CG ARG y 26 6.100 35.073 49.380 1.00 90.91 ATOM 179 CD ARG y 26 5.700 36.513 49.080 1.00 94.55 ATOM 180 NE ARG y 26 4.527 36.951 49.833 1.00 92.75 ATOM 181 CZ ARG y 26 4.031 38.183 49.775 1.00 96.35 ATOM 182 NH1 ARG y 26 2.959 38.504 50.486 1.00100.65 ATOM 183 NH2 ARG y 26 4.614 39.096 49.008 1.00 94.19 ATOM 184 N ARG y 27 8.384 31.655 49.870 1.00 86.36 ATOM 185 CA ARG y 27 8.148 30.221 50.041 1.00 89.40 ATOM 186 C ARG y 27 6.663 29.866 50.063 1.00 89.25 ATOM 187 O ARG y 27 6.188 29.177 50.968 1.00 82.61 ATOM 188 CB ARG y 27 8.833 29.725 51.321 1.00 90.96 ATOM 189 CG ARG y 27 10.353 29.640 51.208 1.00 96.07 ATOM 190 CD ARG y 27 11.019 29.332 52.545 1.00100.05 ATOM 191 NE ARG y 27 12.467 29.166 52.416 1.00100.48 ATOM 192 CZ ARG y 27 13.307 29.049 53.442 1.00 98.89 ATOM 193 NH1 ARG y 27 12.852 29.084 54.690 1.00 97.92 ATOM 194 NH2 ARG y 27 14.608 28.902 53.222 1.00 94.81 ATOM 195 N GLY y 28 5.939 30.343 49.056 1.00 91.73 ATOM 196 CA GLY y 28 4.509 30.118 48.959 1.00 84.38 ATOM 197 C GLY y 28 4.160 28.763 48.376 1.00 75.99 ATOM 198 O GLY y 28 5.040 27.993 47.974 1.00 67.21 ATOM 199 N ASN y 29 2.865 28.472 48.318 1.00 71.89 ATOM 200 CA ASN y 29 2.401 27.156 47.910 1.00 64.53 ATOM 201 C ASN y 29 2.538 26.909 46.406 1.00 66.40 ATOM 202 O ASN y 29 1.561 26.591 45.723 1.00 59.78 ATOM 203 CB ASN y 29 0.950 26.963 48.345 1.00 71.65 ATOM 204 CG ASN y 29 0.591 25.505 48.522 1.00 77.92 ATOM 205 OD1 ASN y 29 1.450 24.628 48.415 1.00 77.93 ATOM 206 ND2 ASN y 29 -0.679 25.236 48.811 1.00 82.49 ATOM 207 N LEU y 30 3.766 27.030 45.906 1.00 66.03 ATOM 208 CA LEU y 30 4.048 26.856 44.493 1.00 61.30 ATOM 209 C LEU y 30 3.795 25.425 44.025 1.00 71.85 ATOM 210 O LEU y 30 3.989 25.113 42.843 1.00 65.39 ATOM 211 CB LEU y 30 5.492 27.253 44.182 1.00 71.58 ATOM 212 CG LEU y 30 5.741 28.713 43.798 1.00 73.16 ATOM 213 CD1 LEU y 30 7.180 28.908 43.325 1.00 62.31 ATOM 214 CD2 LEU y 30 4.749 29.163 42.726 1.00 76.62 ATOM 215 OXT LEU y 30 3.392 24.558 44.807 1.00 65.93 TER