HEADER PHOTOSYNTHESIS 31-DEC-69 6JLN TITLE XFEL structure of cyanobacterial photosystem II (1F state, dataset2) COMPND MOL_ID: 17; COMPND 2 MOLECULE: Photosystem II reaction center protein Ycf12; COMPND 3 CHAIN: Y, y; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.40 ANGSTORMS DBREF 6JLN y 17 46 UNP D0VWR3 YCF12_THEVL 1 30 SEQRES 1 y 29 VAL ILE ALA GLN LEU THR MET ILE ALA MET ILE GLY ILE SEQRES 2 y 29 ALA GLY PRO MET ILE ILE PHE LEU LEU ALA VAL ARG ARG SEQRES 3 y 29 GLY ASN LEU ATOM 1 N VAL y 2 4.757 52.771 18.797 1.00124.66 ATOM 2 CA VAL y 2 5.204 51.389 18.929 1.00130.09 ATOM 3 C VAL y 2 6.065 51.234 20.183 1.00139.81 ATOM 4 O VAL y 2 6.614 50.165 20.452 1.00139.77 ATOM 5 CB VAL y 2 5.994 50.931 17.686 1.00122.07 ATOM 6 CG1 VAL y 2 5.955 49.420 17.558 1.00112.74 ATOM 7 CG2 VAL y 2 5.417 51.567 16.435 1.00126.15 ATOM 8 N ILE y 3 6.172 52.316 20.949 1.00146.29 ATOM 9 CA ILE y 3 6.912 52.308 22.206 1.00150.98 ATOM 10 C ILE y 3 6.028 51.820 23.348 1.00153.38 ATOM 11 O ILE y 3 6.442 50.993 24.167 1.00152.42 ATOM 12 CB ILE y 3 7.456 53.709 22.552 1.00154.20 ATOM 13 CG1 ILE y 3 8.475 54.164 21.507 1.00151.95 ATOM 14 CG2 ILE y 3 8.087 53.717 23.933 1.00157.10 ATOM 15 CD1 ILE y 3 9.084 55.516 21.806 1.00151.77 ATOM 16 N ALA y 4 4.804 52.337 23.391 1.00155.69 ATOM 17 CA ALA y 4 3.842 51.959 24.417 1.00160.98 ATOM 18 C ALA y 4 3.447 50.491 24.287 1.00162.69 ATOM 19 O ALA y 4 3.113 49.844 25.277 1.00169.21 ATOM 20 CB ALA y 4 2.612 52.848 24.343 1.00162.86 ATOM 21 N GLN y 5 3.489 49.973 23.062 1.00155.82 ATOM 22 CA GLN y 5 3.195 48.563 22.803 1.00145.80 ATOM 23 C GLN y 5 4.252 47.643 23.424 1.00143.21 ATOM 24 O GLN y 5 3.920 46.675 24.117 1.00140.89 ATOM 25 CB GLN y 5 3.086 48.311 21.295 1.00133.86 ATOM 26 CG GLN y 5 1.751 48.735 20.700 1.00123.73 ATOM 27 CD GLN y 5 1.823 49.016 19.213 1.00114.73 ATOM 28 OE1 GLN y 5 2.906 49.096 18.633 1.00112.03 ATOM 29 NE2 GLN y 5 0.664 49.177 18.588 1.00107.52 ATOM 30 N LEU y 6 5.522 47.956 23.182 1.00138.68 ATOM 31 CA LEU y 6 6.618 47.180 23.749 1.00128.29 ATOM 32 C LEU y 6 6.693 47.335 25.272 1.00127.66 ATOM 33 O LEU y 6 6.940 46.358 25.982 1.00132.32 ATOM 34 CB LEU y 6 7.948 47.577 23.098 1.00113.54 ATOM 35 CG LEU y 6 8.063 47.253 21.605 1.00 99.56 ATOM 36 CD1 LEU y 6 9.497 47.391 21.117 1.00 90.77 ATOM 37 CD2 LEU y 6 7.532 45.855 21.317 1.00 98.79 ATOM 38 N THR y 7 6.469 48.549 25.774 1.00123.90 ATOM 39 CA THR y 7 6.424 48.771 27.220 1.00122.56 ATOM 40 C THR y 7 5.299 47.958 27.868 1.00126.01 ATOM 41 O THR y 7 5.488 47.343 28.919 1.00127.75 ATOM 42 CB THR y 7 6.227 50.266 27.576 1.00114.55 ATOM 43 OG1 THR y 7 7.215 51.063 26.911 1.00107.45 ATOM 44 CG2 THR y 7 6.338 50.473 29.085 1.00108.32 ATOM 45 N MET y 8 4.131 47.950 27.232 1.00129.02 ATOM 46 CA MET y 8 2.984 47.218 27.760 1.00132.39 ATOM 47 C MET y 8 3.193 45.705 27.724 1.00138.88 ATOM 48 O MET y 8 2.881 45.013 28.693 1.00137.50 ATOM 49 CB MET y 8 1.708 47.589 27.000 1.00124.78 ATOM 50 CG MET y 8 1.030 48.842 27.529 1.00121.84 ATOM 51 SD MET y 8 1.844 49.491 29.006 1.00186.00 ATOM 52 CE MET y 8 2.682 50.933 28.346 1.00135.02 ATOM 53 N ILE y 9 3.724 45.186 26.619 1.00143.64 ATOM 54 CA ILE y 9 3.968 43.747 26.534 1.00148.38 ATOM 55 C ILE y 9 5.136 43.357 27.444 1.00145.27 ATOM 56 O ILE y 9 5.299 42.186 27.785 1.00154.17 ATOM 57 CB ILE y 9 4.242 43.283 25.073 1.00149.39 ATOM 58 CG1 ILE y 9 4.257 41.750 24.967 1.00142.28 ATOM 59 CG2 ILE y 9 5.545 43.861 24.553 1.00150.81 ATOM 60 CD1 ILE y 9 3.104 41.060 25.663 1.00136.01 ATOM 61 N ALA y 10 5.938 44.337 27.852 1.00128.59 ATOM 62 CA ALA y 10 7.005 44.071 28.814 1.00115.61 ATOM 63 C ALA y 10 6.463 44.038 30.247 1.00105.07 ATOM 64 O ALA y 10 6.912 43.237 31.067 1.00103.16 ATOM 65 CB ALA y 10 8.110 45.103 28.686 1.00114.06 ATOM 66 N MET y 11 5.498 44.902 30.545 1.00 94.86 ATOM 67 CA MET y 11 4.853 44.895 31.853 1.00 90.76 ATOM 68 C MET y 11 4.037 43.624 32.038 1.00 94.15 ATOM 69 O MET y 11 4.218 42.870 33.003 1.00104.38 ATOM 70 CB MET y 11 3.957 46.122 32.017 1.00 97.76 ATOM 71 CG MET y 11 4.702 47.448 31.961 1.00103.96 ATOM 72 SD MET y 11 3.599 48.850 32.183 1.00165.95 ATOM 73 CE MET y 11 2.840 48.415 33.747 1.00107.95 ATOM 74 N ILE y 12 3.132 43.409 31.094 1.00 92.02 ATOM 75 CA ILE y 12 2.304 42.216 31.031 1.00 88.73 ATOM 76 C ILE y 12 3.156 40.948 30.991 1.00 85.28 ATOM 77 O ILE y 12 2.908 39.988 31.723 1.00 91.51 ATOM 78 CB ILE y 12 1.382 42.277 29.796 1.00 91.16 ATOM 79 CG1 ILE y 12 0.286 43.320 30.015 1.00 91.14 ATOM 80 CG2 ILE y 12 0.765 40.924 29.491 1.00 94.58 ATOM 81 CD1 ILE y 12 -0.681 43.411 28.860 1.00 99.56 ATOM 82 N GLY y 13 4.178 40.965 30.142 1.00 84.87 ATOM 83 CA GLY y 13 5.067 39.832 29.971 1.00 83.56 ATOM 84 C GLY y 13 5.995 39.588 31.142 1.00 92.83 ATOM 85 O GLY y 13 6.604 38.523 31.250 1.00 98.82 ATOM 86 N ILE y 14 6.117 40.576 32.020 1.00 93.27 ATOM 87 CA ILE y 14 6.905 40.387 33.225 1.00 95.89 ATOM 88 C ILE y 14 5.997 39.903 34.359 1.00 92.54 ATOM 89 O ILE y 14 6.465 39.220 35.265 1.00 86.89 ATOM 90 CB ILE y 14 7.669 41.688 33.633 1.00104.49 ATOM 91 CG1 ILE y 14 9.145 41.382 33.910 1.00112.18 ATOM 92 CG2 ILE y 14 7.008 42.399 34.822 1.00 92.37 ATOM 93 CD1 ILE y 14 9.878 40.755 32.734 1.00112.42 ATOM 94 N ALA y 15 4.700 40.221 34.284 1.00 87.22 ATOM 95 CA ALA y 15 3.751 39.869 35.358 1.00 81.80 ATOM 96 C ALA y 15 3.738 38.385 35.768 1.00 84.90 ATOM 97 O ALA y 15 3.695 38.080 36.956 1.00 87.19 ATOM 98 CB ALA y 15 2.342 40.287 34.967 1.00 74.08 ATOM 99 N GLY y 16 3.751 37.473 34.795 1.00 88.25 ATOM 100 CA GLY y 16 3.714 36.043 35.081 1.00 82.99 ATOM 101 C GLY y 16 4.920 35.560 35.872 1.00 85.69 ATOM 102 O GLY y 16 4.793 35.076 37.026 1.00 89.35 ATOM 103 N PRO y 17 6.110 35.683 35.258 1.00 78.42 ATOM 104 CA PRO y 17 7.374 35.417 35.950 1.00 82.15 ATOM 105 C PRO y 17 7.487 36.141 37.292 1.00 91.64 ATOM 106 O PRO y 17 8.060 35.583 38.216 1.00 88.15 ATOM 107 CB PRO y 17 8.415 35.930 34.957 1.00 76.60 ATOM 108 CG PRO y 17 7.796 35.625 33.630 1.00 74.96 ATOM 109 CD PRO y 17 6.325 35.931 33.822 1.00 81.10 ATOM 110 N MET y 18 6.940 37.351 37.386 1.00 95.46 ATOM 111 CA MET y 18 6.944 38.111 38.628 1.00 95.45 ATOM 112 C MET y 18 6.160 37.372 39.709 1.00 98.16 ATOM 113 O MET y 18 6.630 37.254 40.840 1.00 98.14 ATOM 114 CB MET y 18 6.367 39.519 38.408 1.00 91.62 ATOM 115 CG MET y 18 6.277 40.381 39.673 1.00 95.16 ATOM 116 SD MET y 18 7.876 40.613 40.468 1.00119.73 ATOM 117 CE MET y 18 8.881 41.136 39.079 1.00111.99 ATOM 118 N ILE y 19 4.977 36.866 39.364 1.00 98.39 ATOM 119 CA ILE y 19 4.169 36.107 40.320 1.00 97.74 ATOM 120 C ILE y 19 4.938 34.871 40.788 1.00 95.19 ATOM 121 O ILE y 19 5.034 34.602 42.003 1.00 94.11 ATOM 122 CB ILE y 19 2.807 35.679 39.724 1.00 96.57 ATOM 123 CG1 ILE y 19 1.947 36.906 39.413 1.00 99.50 ATOM 124 CG2 ILE y 19 2.059 34.770 40.685 1.00 90.24 ATOM 125 CD1 ILE y 19 0.686 36.584 38.627 1.00 96.54 ATOM 126 N ILE y 20 5.510 34.133 39.833 1.00 86.53 ATOM 127 CA ILE y 20 6.305 32.961 40.218 1.00 88.77 ATOM 128 C ILE y 20 7.491 33.311 41.135 1.00 97.60 ATOM 129 O ILE y 20 7.728 32.648 42.144 1.00 95.26 ATOM 130 CB ILE y 20 6.834 32.225 39.000 1.00 88.15 ATOM 131 CG1 ILE y 20 5.667 31.624 38.221 1.00 88.30 ATOM 132 CG2 ILE y 20 7.794 31.132 39.433 1.00 90.51 ATOM 133 CD1 ILE y 20 4.690 30.881 39.103 1.00 89.72 ATOM 134 N PHE y 21 8.218 34.361 40.776 1.00102.11 ATOM 135 CA PHE y 21 9.358 34.858 41.540 1.00 94.57 ATOM 136 C PHE y 21 8.977 35.252 42.964 1.00 94.50 ATOM 137 O PHE y 21 9.629 34.858 43.924 1.00 86.76 ATOM 138 CB PHE y 21 9.976 36.058 40.815 1.00 92.49 ATOM 139 CG PHE y 21 11.150 36.663 41.527 1.00 98.19 ATOM 140 CD1 PHE y 21 12.432 36.187 41.301 1.00 98.66 ATOM 141 CD2 PHE y 21 10.973 37.719 42.417 1.00 97.53 ATOM 142 CE1 PHE y 21 13.516 36.747 41.954 1.00 97.26 ATOM 143 CE2 PHE y 21 12.052 38.280 43.072 1.00 89.20 ATOM 144 CZ PHE y 21 13.326 37.793 42.839 1.00 91.07 ATOM 145 N LEU y 22 7.927 36.051 43.088 1.00 94.84 ATOM 146 CA LEU y 22 7.464 36.492 44.388 1.00 90.02 ATOM 147 C LEU y 22 7.088 35.305 45.256 1.00 92.98 ATOM 148 O LEU y 22 7.469 35.240 46.430 1.00 85.79 ATOM 149 CB LEU y 22 6.277 37.437 44.237 1.00 88.70 ATOM 150 CG LEU y 22 6.654 38.783 43.625 1.00 83.70 ATOM 151 CD1 LEU y 22 5.421 39.642 43.415 1.00 74.26 ATOM 152 CD2 LEU y 22 7.640 39.473 44.533 1.00 83.77 ATOM 153 N LEU y 23 6.352 34.356 44.682 1.00 96.69 ATOM 154 CA LEU y 23 5.954 33.186 45.458 1.00 91.37 ATOM 155 C LEU y 23 7.170 32.350 45.857 1.00 83.85 ATOM 156 O LEU y 23 7.252 31.873 46.982 1.00 78.00 ATOM 157 CB LEU y 23 4.944 32.345 44.681 1.00 87.36 ATOM 158 CG LEU y 23 3.545 32.964 44.702 1.00 89.20 ATOM 159 CD1 LEU y 23 2.585 32.190 43.823 1.00 96.36 ATOM 160 CD2 LEU y 23 3.032 33.023 46.120 1.00 76.07 ATOM 161 N ALA y 24 8.125 32.205 44.943 1.00 87.49 ATOM 162 CA ALA y 24 9.340 31.434 45.202 1.00 81.60 ATOM 163 C ALA y 24 10.175 32.070 46.300 1.00 95.07 ATOM 164 O ALA y 24 10.836 31.380 47.081 1.00101.95 ATOM 165 CB ALA y 24 10.169 31.296 43.929 1.00 74.84 ATOM 166 N VAL y 25 10.144 33.393 46.354 1.00 97.28 ATOM 167 CA VAL y 25 10.900 34.121 47.356 1.00101.87 ATOM 168 C VAL y 25 10.326 33.893 48.743 1.00106.41 ATOM 169 O VAL y 25 11.052 33.542 49.672 1.00113.33 ATOM 170 CB VAL y 25 10.926 35.623 47.054 1.00102.58 ATOM 171 CG1 VAL y 25 11.421 36.385 48.254 1.00105.11 ATOM 172 CG2 VAL y 25 11.814 35.896 45.843 1.00106.86 ATOM 173 N ARG y 26 9.020 34.080 48.886 1.00104.98 ATOM 174 CA ARG y 26 8.395 33.893 50.186 1.00 98.91 ATOM 175 C ARG y 26 7.946 32.446 50.387 1.00101.33 ATOM 176 O ARG y 26 7.003 32.184 51.137 1.00104.98 ATOM 177 CB ARG y 26 7.217 34.858 50.365 1.00 96.98 ATOM 178 CG ARG y 26 6.234 34.899 49.222 1.00103.30 ATOM 179 CD ARG y 26 5.861 36.340 48.904 1.00107.94 ATOM 180 NE ARG y 26 4.671 36.791 49.621 1.00106.48 ATOM 181 CZ ARG y 26 4.183 38.025 49.543 1.00103.11 ATOM 182 NH1 ARG y 26 3.090 38.352 50.221 1.00103.24 ATOM 183 NH2 ARG y 26 4.796 38.932 48.789 1.00 97.14 ATOM 184 N ARG y 27 8.646 31.525 49.724 1.00101.06 ATOM 185 CA ARG y 27 8.418 30.084 49.846 1.00104.83 ATOM 186 C ARG y 27 6.932 29.714 49.868 1.00106.75 ATOM 187 O ARG y 27 6.451 29.084 50.808 1.00107.61 ATOM 188 CB ARG y 27 9.112 29.551 51.103 1.00107.21 ATOM 189 CG ARG y 27 10.636 29.629 51.059 1.00112.85 ATOM 190 CD ARG y 27 11.253 29.153 52.370 1.00119.57 ATOM 191 NE ARG y 27 12.716 29.160 52.350 1.00125.42 ATOM 192 CZ ARG y 27 13.480 29.052 53.436 1.00129.93 ATOM 193 NH1 ARG y 27 12.925 28.937 54.636 1.00128.25 ATOM 194 NH2 ARG y 27 14.803 29.066 53.325 1.00129.98 ATOM 195 N GLY y 28 6.212 30.114 48.826 1.00103.10 ATOM 196 CA GLY y 28 4.773 29.918 48.771 1.00 92.18 ATOM 197 C GLY y 28 4.362 28.605 48.132 1.00 92.62 ATOM 198 O GLY y 28 5.205 27.807 47.696 1.00 81.80 ATOM 199 N ASN y 29 3.052 28.386 48.060 1.00 91.11 ATOM 200 CA ASN y 29 2.521 27.102 47.626 1.00 88.72 ATOM 201 C ASN y 29 2.652 26.861 46.122 1.00 83.77 ATOM 202 O ASN y 29 1.661 26.576 45.442 1.00 82.03 ATOM 203 CB ASN y 29 1.057 26.977 48.050 1.00 94.01 ATOM 204 CG ASN y 29 0.675 25.551 48.400 1.00103.82 ATOM 205 OD1 ASN y 29 1.529 24.662 48.455 1.00102.55 ATOM 206 ND2 ASN y 29 -0.611 25.327 48.650 1.00108.92 ATOM 207 N LEU y 30 3.881 26.964 45.616 1.00 83.33 ATOM 208 CA LEU y 30 4.182 26.668 44.214 1.00 88.11 ATOM 209 C LEU y 30 4.059 25.179 43.903 1.00 94.89 ATOM 210 O LEU y 30 4.363 24.731 42.796 1.00101.44 ATOM 211 CB LEU y 30 5.588 27.145 43.853 1.00 86.13 ATOM 212 CG LEU y 30 5.778 28.632 43.561 1.00 84.49 ATOM 213 CD1 LEU y 30 7.250 28.913 43.300 1.00 84.12 ATOM 214 CD2 LEU y 30 4.922 29.070 42.373 1.00 82.66 ATOM 215 OXT LEU y 30 3.663 24.382 44.751 1.00 99.75 TER