HEADER TRANSPORT PROTEIN 31-DEC-69 6OO2 TITLE Vps4 with Cyclic Peptide Bound in the Central Pore COMPND MOL_ID: 3; COMPND 2 MOLECULE: Vacuolar protein sorting-associated protein VTA1; COMPND 3 CHAIN: H, I, J, K, L, M, N, O, P, Q, R, S; COMPND 4 FRAGMENT: VSL domain (UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 6OO2 Q 280 330 UNP Q06263 VTA1_YEAST 280 330 SEQRES 1 Q 50 LYS ASP GLU LEU THR LYS ILE MET ASP ARG ALA SER LYS SEQRES 2 Q 50 ILE GLU GLN ILE GLN LYS LEU ALA LYS TYR ALA ILE SER SEQRES 3 Q 50 ALA LEU ASN TYR GLU ASP LEU PRO THR ALA LYS ASP GLU SEQRES 4 Q 50 LEU THR LYS ALA LEU ASP LEU LEU ASN SER ILE ATOM 1 N LYS Q 2 159.765 189.152 118.005 1.00 53.47 ATOM 2 CA LYS Q 2 160.270 188.117 118.958 1.00 52.71 ATOM 3 C LYS Q 2 161.098 188.766 120.070 1.00 50.44 ATOM 4 O LYS Q 2 160.935 188.438 121.251 1.00 48.19 ATOM 5 CB LYS Q 2 161.081 187.041 118.223 1.00 55.87 ATOM 6 N ASP Q 3 161.969 189.696 119.682 1.00 51.26 ATOM 7 CA ASP Q 3 162.861 190.384 120.618 1.00 49.70 ATOM 8 C ASP Q 3 162.140 191.449 121.449 1.00 46.72 ATOM 9 O ASP Q 3 162.466 191.652 122.626 1.00 44.09 ATOM 10 CB ASP Q 3 164.064 190.977 119.874 1.00 52.31 ATOM 11 N GLU Q 4 161.165 192.120 120.833 1.00 46.45 ATOM 12 CA GLU Q 4 160.304 193.069 121.537 1.00 44.22 ATOM 13 C GLU Q 4 159.392 192.330 122.505 1.00 42.32 ATOM 14 O GLU Q 4 159.015 192.872 123.549 1.00 40.37 ATOM 15 CB GLU Q 4 159.460 193.889 120.554 1.00 44.80 ATOM 16 N LEU Q 5 159.012 191.102 122.117 1.00 43.37 ATOM 17 CA LEU Q 5 158.204 190.180 122.967 1.00 42.25 ATOM 18 C LEU Q 5 159.049 189.718 124.165 1.00 40.67 ATOM 19 O LEU Q 5 158.537 189.766 125.301 1.00 39.01 ATOM 20 CB LEU Q 5 157.767 188.985 122.113 1.00 44.34 ATOM 21 N THR Q 6 160.303 189.316 123.911 1.00 42.05 ATOM 22 CA THR Q 6 161.251 188.936 124.964 1.00 40.91 ATOM 23 C THR Q 6 161.382 190.073 125.982 1.00 38.91 ATOM 24 O THR Q 6 161.454 189.822 127.180 1.00 36.84 ATOM 25 CB THR Q 6 162.652 188.577 124.382 1.00 43.51 ATOM 26 N LYS Q 7 161.379 191.314 125.492 1.00 39.07 ATOM 27 CA LYS Q 7 161.510 192.507 126.337 1.00 37.81 ATOM 28 C LYS Q 7 160.301 192.756 127.252 1.00 35.93 ATOM 29 O LYS Q 7 160.470 192.991 128.450 1.00 34.06 ATOM 30 CB LYS Q 7 161.805 193.738 125.471 1.00 39.01 ATOM 31 N ILE Q 8 159.096 192.716 126.686 1.00 36.49 ATOM 32 CA ILE Q 8 157.860 192.961 127.438 1.00 36.01 ATOM 33 C ILE Q 8 157.580 191.822 128.434 1.00 35.07 ATOM 34 O ILE Q 8 157.126 192.070 129.556 1.00 33.73 ATOM 35 CB ILE Q 8 156.631 193.188 126.494 1.00 36.57 ATOM 36 N MET Q 9 157.862 190.590 128.009 1.00 36.82 ATOM 37 CA MET Q 9 157.738 189.418 128.911 1.00 36.15 ATOM 38 C MET Q 9 158.788 189.558 130.023 1.00 33.89 ATOM 39 O MET Q 9 158.456 189.281 131.192 1.00 32.62 ATOM 40 CB MET Q 9 157.987 188.121 128.135 1.00 38.03 ATOM 41 N ASP Q 10 159.993 190.016 129.656 1.00 41.74 ATOM 42 CA ASP Q 10 161.147 190.156 130.589 1.00 40.29 ATOM 43 C ASP Q 10 160.872 191.167 131.712 1.00 37.20 ATOM 44 O ASP Q 10 161.148 190.820 132.877 1.00 35.11 ATOM 45 CB ASP Q 10 162.417 190.540 129.825 1.00 42.46 ATOM 46 N ARG Q 11 160.319 192.345 131.398 1.00 36.68 ATOM 47 CA ARG Q 11 160.043 193.321 132.453 1.00 34.22 ATOM 48 C ARG Q 11 158.767 192.949 133.208 1.00 32.54 ATOM 49 O ARG Q 11 158.700 193.091 134.430 1.00 30.85 ATOM 50 CB ARG Q 11 159.925 194.729 131.857 1.00 35.22 ATOM 51 N ALA Q 12 157.765 192.470 132.467 1.00 33.90 ATOM 52 CA ALA Q 12 156.511 191.989 133.043 1.00 33.05 ATOM 53 C ALA Q 12 156.782 190.831 133.993 1.00 32.02 ATOM 54 O ALA Q 12 156.181 190.737 135.072 1.00 30.29 ATOM 55 CB ALA Q 12 155.553 191.561 131.944 1.00 34.36 ATOM 56 N SER Q 13 157.705 189.956 133.605 1.00 33.78 ATOM 57 CA SER Q 13 158.121 188.845 134.467 1.00 33.52 ATOM 58 C SER Q 13 158.794 189.338 135.747 1.00 31.28 ATOM 59 O SER Q 13 158.499 188.837 136.837 1.00 29.02 ATOM 60 CB SER Q 13 159.025 187.876 133.702 1.00 35.73 ATOM 61 N LYS Q 14 159.685 190.324 135.631 1.00 31.32 ATOM 62 CA LYS Q 14 160.345 190.884 136.822 1.00 30.35 ATOM 63 C LYS Q 14 159.338 191.520 137.760 1.00 27.89 ATOM 64 O LYS Q 14 159.406 191.315 138.966 1.00 25.48 ATOM 65 CB LYS Q 14 161.424 191.902 136.442 1.00 30.88 ATOM 66 N ILE Q 15 158.406 192.293 137.210 1.00 28.14 ATOM 67 CA ILE Q 15 157.356 192.914 138.027 1.00 26.47 ATOM 68 C ILE Q 15 156.537 191.859 138.796 1.00 25.69 ATOM 69 O ILE Q 15 156.300 192.026 140.007 1.00 23.52 ATOM 70 CB ILE Q 15 156.470 193.882 137.186 1.00 27.30 ATOM 71 N GLU Q 16 156.160 190.767 138.115 1.00 27.77 ATOM 72 CA GLU Q 16 155.459 189.647 138.758 1.00 27.79 ATOM 73 C GLU Q 16 156.277 189.097 139.926 1.00 25.75 ATOM 74 O GLU Q 16 155.723 188.814 140.999 1.00 23.68 ATOM 75 CB GLU Q 16 155.126 188.514 137.762 1.00 29.27 ATOM 76 N GLN Q 17 157.592 188.969 139.739 1.00 26.02 ATOM 77 CA GLN Q 17 158.477 188.440 140.787 1.00 25.11 ATOM 78 C GLN Q 17 158.585 189.378 141.988 1.00 22.24 ATOM 79 O GLN Q 17 158.583 188.936 143.125 1.00 21.31 ATOM 80 CB GLN Q 17 159.866 188.097 140.225 1.00 27.04 ATOM 81 N ILE Q 18 158.661 190.676 141.724 1.00 21.22 ATOM 82 CA ILE Q 18 158.680 191.696 142.772 1.00 19.50 ATOM 83 C ILE Q 18 157.407 191.620 143.608 1.00 18.65 ATOM 84 O ILE Q 18 157.475 191.647 144.840 1.00 16.73 ATOM 85 CB ILE Q 18 158.836 193.114 142.169 1.00 19.89 ATOM 86 N GLN Q 19 156.258 191.538 142.933 1.00 19.16 ATOM 87 CA GLN Q 19 154.969 191.420 143.623 1.00 18.24 ATOM 88 C GLN Q 19 154.871 190.117 144.439 1.00 18.17 ATOM 89 O GLN Q 19 154.304 190.116 145.535 1.00 17.13 ATOM 90 CB GLN Q 19 153.813 191.499 142.627 1.00 19.72 ATOM 91 N LYS Q 20 155.391 189.015 143.885 1.00 19.37 ATOM 92 CA LYS Q 20 155.428 187.733 144.585 1.00 19.72 ATOM 93 C LYS Q 20 156.235 187.858 145.890 1.00 18.07 ATOM 94 O LYS Q 20 155.784 187.421 146.952 1.00 17.74 ATOM 95 CB LYS Q 20 156.022 186.635 143.678 1.00 20.83 ATOM 96 N LEU Q 21 157.415 188.458 145.799 1.00 17.85 ATOM 97 CA LEU Q 21 158.290 188.623 146.950 1.00 16.79 ATOM 98 C LEU Q 21 157.622 189.473 148.007 1.00 15.31 ATOM 99 O LEU Q 21 157.692 189.149 149.193 1.00 14.30 ATOM 100 CB LEU Q 21 159.656 189.205 146.542 1.00 17.57 ATOM 101 N ALA Q 22 156.932 190.534 147.589 1.00 15.34 ATOM 102 CA ALA Q 22 156.165 191.357 148.543 1.00 13.50 ATOM 103 C ALA Q 22 155.036 190.587 149.256 1.00 13.84 ATOM 104 O ALA Q 22 154.877 190.694 150.477 1.00 12.71 ATOM 105 CB ALA Q 22 155.652 192.647 147.858 1.00 14.23 ATOM 106 N LYS Q 23 154.314 189.762 148.501 1.00 13.88 ATOM 107 CA LYS Q 23 153.262 188.923 149.041 1.00 14.31 ATOM 108 C LYS Q 23 153.842 187.923 150.045 1.00 13.95 ATOM 109 O LYS Q 23 153.294 187.711 151.116 1.00 13.41 ATOM 110 CB LYS Q 23 152.535 188.200 147.910 1.00 16.70 ATOM 111 N TYR Q 24 155.015 187.357 149.726 1.00 13.92 ATOM 112 CA TYR Q 24 155.698 186.407 150.652 1.00 14.12 ATOM 113 C TYR Q 24 156.104 187.128 151.949 1.00 12.81 ATOM 114 O TYR Q 24 155.844 186.591 153.044 1.00 12.76 ATOM 115 CB TYR Q 24 156.908 185.774 149.959 1.00 16.52 ATOM 116 N ALA Q 25 156.692 188.323 151.816 1.00 50.00 ATOM 117 CA ALA Q 25 157.070 189.197 152.909 1.00 50.00 ATOM 118 C ALA Q 25 155.853 189.441 153.798 1.00 50.00 ATOM 119 O ALA Q 25 155.915 189.217 155.009 1.00 50.00 ATOM 120 CB ALA Q 25 157.585 190.514 152.379 1.00 50.00 ATOM 121 N ILE Q 26 154.743 189.891 153.211 1.00 50.00 ATOM 122 CA ILE Q 26 153.522 190.129 154.010 1.00 50.00 ATOM 123 C ILE Q 26 153.199 188.850 154.802 1.00 50.00 ATOM 124 O ILE Q 26 153.170 188.881 156.037 1.00 50.00 ATOM 125 CB ILE Q 26 152.279 190.530 153.112 1.00 50.00 ATOM 126 N SER Q 27 152.988 187.740 154.087 1.00 50.00 ATOM 127 CA SER Q 27 152.692 186.436 154.684 1.00 50.00 ATOM 128 C SER Q 27 153.620 186.103 155.828 1.00 50.00 ATOM 129 O SER Q 27 153.208 185.438 156.786 1.00 50.00 ATOM 130 CB SER Q 27 152.832 185.333 153.652 1.00 50.00 ATOM 131 N ALA Q 28 154.881 186.551 155.730 1.00 50.00 ATOM 132 CA ALA Q 28 155.885 186.298 156.760 1.00 50.00 ATOM 133 C ALA Q 28 155.622 187.074 158.041 1.00 50.00 ATOM 134 O ALA Q 28 155.755 186.488 159.124 1.00 50.00 ATOM 135 CB ALA Q 28 157.241 186.627 156.241 1.00 50.00 ATOM 136 N LEU Q 29 155.241 188.344 157.916 1.00 50.00 ATOM 137 CA LEU Q 29 155.008 189.184 159.117 1.00 50.00 ATOM 138 C LEU Q 29 153.857 188.570 159.915 1.00 50.00 ATOM 139 O LEU Q 29 153.716 188.910 161.106 1.00 50.00 ATOM 140 CB LEU Q 29 154.689 190.619 158.687 1.00 50.00 ATOM 141 N ASN Q 30 153.046 187.730 159.264 1.00 50.00 ATOM 142 CA ASN Q 30 151.888 187.164 159.943 1.00 50.00 ATOM 143 C ASN Q 30 152.331 186.155 161.018 1.00 50.00 ATOM 144 O ASN Q 30 151.502 185.446 161.597 1.00 50.00 ATOM 145 CB ASN Q 30 150.980 186.469 158.926 1.00 50.00 ATOM 146 N TYR Q 31 153.650 186.011 161.163 1.00 50.00 ATOM 147 CA TYR Q 31 154.272 185.147 162.200 1.00 50.00 ATOM 148 C TYR Q 31 155.314 186.001 162.929 1.00 50.00 ATOM 149 O TYR Q 31 156.127 185.465 163.706 1.00 50.00 ATOM 150 CB TYR Q 31 154.899 183.912 161.548 1.00 50.00 ATOM 151 N GLU Q 32 155.243 187.313 162.684 1.00 50.00 ATOM 152 CA GLU Q 32 156.199 188.294 163.175 1.00 50.00 ATOM 153 C GLU Q 32 157.659 188.062 162.715 1.00 50.00 ATOM 154 O GLU Q 32 158.599 188.759 163.148 1.00 50.00 ATOM 155 CB GLU Q 32 156.098 188.391 164.691 1.00 50.00 ATOM 156 N ASP Q 33 157.833 187.107 161.796 1.00 50.00 ATOM 157 CA ASP Q 33 159.144 186.760 161.254 1.00 50.00 ATOM 158 C ASP Q 33 159.784 187.946 160.561 1.00 50.00 ATOM 159 O ASP Q 33 159.713 188.047 159.343 1.00 50.00 ATOM 160 CB ASP Q 33 159.009 185.637 160.244 1.00 50.00 ATOM 161 N LEU Q 34 160.421 188.830 161.318 1.00 50.00 ATOM 162 CA LEU Q 34 161.055 189.984 160.706 1.00 50.00 ATOM 163 C LEU Q 34 162.182 189.573 159.741 1.00 50.00 ATOM 164 O LEU Q 34 162.322 190.158 158.668 1.00 50.00 ATOM 165 CB LEU Q 34 161.587 190.926 161.784 1.00 50.00 ATOM 166 N PRO Q 35 162.996 188.554 160.109 1.00 50.00 ATOM 167 CA PRO Q 35 164.098 188.067 159.267 1.00 50.00 ATOM 168 C PRO Q 35 163.722 187.890 157.806 1.00 50.00 ATOM 169 O PRO Q 35 164.240 188.604 156.941 1.00 50.00 ATOM 170 CB PRO Q 35 164.470 186.744 159.930 1.00 50.00 ATOM 171 N THR Q 36 162.837 186.928 157.539 1.00 50.00 ATOM 172 CA THR Q 36 162.354 186.662 156.181 1.00 50.00 ATOM 173 C THR Q 36 161.910 187.959 155.508 1.00 50.00 ATOM 174 O THR Q 36 162.326 188.286 154.392 1.00 50.00 ATOM 175 CB THR Q 36 161.119 185.772 156.196 1.00 50.00 ATOM 176 N ALA Q 37 161.042 188.678 156.210 1.00 50.00 ATOM 177 CA ALA Q 37 160.491 189.929 155.730 1.00 50.00 ATOM 178 C ALA Q 37 161.532 190.898 155.243 1.00 50.00 ATOM 179 O ALA Q 37 161.555 191.239 154.068 1.00 50.00 ATOM 180 CB ALA Q 37 159.679 190.573 156.819 1.00 50.00 ATOM 181 N LYS Q 38 162.441 191.301 156.129 1.00 50.00 ATOM 182 CA LYS Q 38 163.416 192.360 155.762 1.00 50.00 ATOM 183 C LYS Q 38 164.199 191.887 154.538 1.00 50.00 ATOM 184 O LYS Q 38 164.801 192.735 153.850 1.00 50.00 ATOM 185 CB LYS Q 38 164.339 192.687 156.940 1.00 50.00 ATOM 186 N ASP Q 39 164.211 190.573 154.313 1.00 50.00 ATOM 187 CA ASP Q 39 164.957 189.999 153.208 1.00 50.00 ATOM 188 C ASP Q 39 164.176 190.033 151.882 1.00 50.00 ATOM 189 O ASP Q 39 164.656 190.613 150.902 1.00 50.00 ATOM 190 CB ASP Q 39 165.349 188.572 153.584 1.00 50.00 ATOM 191 N GLU Q 40 162.987 189.421 151.852 1.00 50.00 ATOM 192 CA GLU Q 40 162.127 189.388 150.662 1.00 50.00 ATOM 193 C GLU Q 40 161.727 190.808 150.250 1.00 50.00 ATOM 194 O GLU Q 40 161.736 191.153 149.075 1.00 50.00 ATOM 195 CB GLU Q 40 160.880 188.573 150.955 1.00 50.00 ATOM 196 N LEU Q 41 161.422 191.639 151.244 1.00 50.00 ATOM 197 CA LEU Q 41 161.024 193.038 150.949 1.00 50.00 ATOM 198 C LEU Q 41 162.234 193.715 150.304 1.00 50.00 ATOM 199 O LEU Q 41 162.072 194.804 149.720 1.00 50.00 ATOM 200 CB LEU Q 41 160.625 193.737 152.252 1.00 50.00 ATOM 201 N THR Q 42 163.407 193.091 150.454 1.00 50.00 ATOM 202 CA THR Q 42 164.654 193.663 149.946 1.00 50.00 ATOM 203 C THR Q 42 164.983 193.043 148.597 1.00 50.00 ATOM 204 O THR Q 42 165.181 193.765 147.623 1.00 50.00 ATOM 205 CB THR Q 42 165.835 193.425 150.904 1.00 50.00 ATOM 206 N LYS Q 43 165.048 191.712 148.522 1.00 50.00 ATOM 207 CA LYS Q 43 165.318 191.064 147.244 1.00 50.00 ATOM 208 C LYS Q 43 164.391 191.689 146.201 1.00 50.00 ATOM 209 O LYS Q 43 164.761 191.829 145.037 1.00 50.00 ATOM 210 CB LYS Q 43 165.040 189.570 147.328 1.00 50.00 ATOM 211 N ALA Q 44 163.184 192.074 146.639 1.00 50.00 ATOM 212 CA ALA Q 44 162.178 192.709 145.789 1.00 50.00 ATOM 213 C ALA Q 44 162.595 194.118 145.363 1.00 50.00 ATOM 214 O ALA Q 44 162.689 194.417 144.179 1.00 50.00 ATOM 215 CB ALA Q 44 160.849 192.764 146.515 1.00 50.00 ATOM 216 N LEU Q 45 162.834 194.988 146.333 1.00 50.00 ATOM 217 CA LEU Q 45 163.249 196.360 146.054 1.00 50.00 ATOM 218 C LEU Q 45 164.451 196.467 145.104 1.00 50.00 ATOM 219 O LEU Q 45 164.417 197.230 144.134 1.00 50.00 ATOM 220 CB LEU Q 45 163.590 197.082 147.359 1.00 50.00 ATOM 221 N ASP Q 46 165.519 195.719 145.399 1.00 50.00 ATOM 222 CA ASP Q 46 166.735 195.713 144.566 1.00 50.00 ATOM 223 C ASP Q 46 166.310 195.443 143.124 1.00 50.00 ATOM 224 O ASP Q 46 166.736 196.125 142.196 1.00 50.00 ATOM 225 CB ASP Q 46 167.717 194.605 145.009 1.00 50.00 ATOM 226 N LEU Q 47 165.451 194.441 142.958 1.00 50.00 ATOM 227 CA LEU Q 47 164.939 194.049 141.649 1.00 50.00 ATOM 228 C LEU Q 47 164.100 195.130 140.941 1.00 50.00 ATOM 229 O LEU Q 47 164.054 195.156 139.714 1.00 50.00 ATOM 230 CB LEU Q 47 164.131 192.756 141.783 1.00 50.00 ATOM 231 N LEU Q 48 163.435 196.007 141.697 1.00 50.00 ATOM 232 CA LEU Q 48 162.631 197.092 141.111 1.00 50.00 ATOM 233 C LEU Q 48 163.588 198.185 140.618 1.00 50.00 ATOM 234 O LEU Q 48 163.204 199.104 139.876 1.00 50.00 ATOM 235 CB LEU Q 48 161.656 197.670 142.156 1.00 50.00 ATOM 236 N ASN Q 49 164.839 198.077 141.042 1.00 50.00 ATOM 237 CA ASN Q 49 165.853 199.030 140.634 1.00 50.00 ATOM 238 C ASN Q 49 166.564 198.379 139.458 1.00 50.00 ATOM 239 O ASN Q 49 167.143 199.058 138.617 1.00 50.00 ATOM 240 CB ASN Q 49 166.822 199.297 141.784 1.00 50.00 ATOM 241 N SER Q 50 166.508 197.050 139.408 1.00 50.00 ATOM 242 CA SER Q 50 167.115 196.300 138.317 1.00 50.00 ATOM 243 C SER Q 50 166.281 196.531 137.058 1.00 50.00 ATOM 244 O SER Q 50 166.776 196.338 135.941 1.00 50.00 ATOM 245 CB SER Q 50 167.150 194.804 138.642 1.00 50.00 ATOM 246 N ILE Q 51 165.018 196.933 137.252 1.00 50.00 ATOM 247 CA ILE Q 51 164.081 197.230 136.148 1.00 50.00 ATOM 248 C ILE Q 51 164.663 198.408 135.346 1.00 50.00 ATOM 249 O ILE Q 51 165.690 198.987 135.790 1.00 50.00 ATOM 250 CB ILE Q 51 162.673 197.564 136.677 1.00 30.00 TER