HEADER VIRAL PROTEIN/Immune System 31-DEC-69 6OPP TITLE Asymmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex TITLE 2 with DDM COMPND MOL_ID: 3; COMPND 2 MOLECULE: Envelope glycoprotein gp160; COMPND 3 CHAIN: A, D, J; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 6OPP D 31 513 UNP B3UES2 B3UES2_9HIV 29 517 SEQRES 1 D 12 VAL LYS LEU THR PRO LEU CYS VAL THR LEU ASN CYS SEQRES 1 D 10 LEU ILE ASN CYS ASN THR SER VAL ILE THR ATOM 1 N VAL D 125 184.836 225.204 177.229 1.00 52.30 ATOM 2 CA VAL D 125 185.388 226.293 178.015 1.00 49.01 ATOM 3 C VAL D 125 184.731 226.374 179.381 1.00 52.34 ATOM 4 O VAL D 125 183.512 226.524 179.500 1.00 56.80 ATOM 5 CB VAL D 125 185.248 227.645 177.305 1.00 46.20 ATOM 6 CG1 VAL D 125 185.830 228.716 178.156 1.00 51.14 ATOM 7 CG2 VAL D 125 185.963 227.611 176.001 1.00 56.63 ATOM 8 N LYS D 126 185.543 226.322 180.420 1.00 51.13 ATOM 9 CA LYS D 126 185.056 226.431 181.787 1.00 48.16 ATOM 10 C LYS D 126 185.408 227.806 182.343 1.00 53.10 ATOM 11 O LYS D 126 186.573 228.205 182.310 1.00 59.85 ATOM 12 CB LYS D 126 185.678 225.329 182.630 1.00 55.35 ATOM 13 CG LYS D 126 185.216 225.261 184.031 1.00 57.49 ATOM 14 CD LYS D 126 185.844 224.099 184.759 1.00 70.08 ATOM 15 CE LYS D 126 185.362 224.031 186.196 1.00 82.17 ATOM 16 NZ LYS D 126 185.944 222.864 186.923 1.00 79.64 ATOM 17 N LEU D 127 184.433 228.533 182.875 1.00 49.32 ATOM 18 CA LEU D 127 184.711 229.867 183.394 1.00 51.29 ATOM 19 C LEU D 127 184.228 230.058 184.811 1.00 57.95 ATOM 20 O LEU D 127 183.017 230.032 185.064 1.00 60.66 ATOM 21 CB LEU D 127 183.960 230.901 182.575 1.00 45.28 ATOM 22 CG LEU D 127 184.283 230.981 181.135 1.00 53.16 ATOM 23 CD1 LEU D 127 183.309 230.094 180.347 1.00 56.47 ATOM 24 CD2 LEU D 127 184.183 232.410 180.683 1.00 54.56 ATOM 25 N THR D 128 185.138 230.321 185.741 1.00 61.33 ATOM 26 CA THR D 128 184.710 230.517 187.126 1.00 65.01 ATOM 27 C THR D 128 185.300 231.805 187.671 1.00 72.30 ATOM 28 O THR D 128 186.391 232.188 187.263 1.00 79.00 ATOM 29 CB THR D 128 185.167 229.339 187.999 1.00 70.60 ATOM 30 OG1 THR D 128 186.592 229.275 187.998 1.00 74.42 ATOM 31 CG2 THR D 128 184.607 228.062 187.450 1.00 66.80 ATOM 32 N PRO D 129 184.660 232.480 188.621 1.00 72.05 ATOM 33 CA PRO D 129 185.163 233.664 189.265 1.00 78.86 ATOM 34 C PRO D 129 186.286 233.306 190.201 1.00 87.21 ATOM 35 O PRO D 129 186.331 232.189 190.713 1.00 88.72 ATOM 36 CB PRO D 129 183.942 234.180 190.014 1.00 72.57 ATOM 37 CG PRO D 129 183.131 232.947 190.287 1.00 72.75 ATOM 38 CD PRO D 129 183.346 232.060 189.092 1.00 69.45 ATOM 39 N LEU D 130 187.154 234.265 190.443 1.00 95.62 ATOM 40 CA LEU D 130 188.220 234.159 191.417 1.00105.83 ATOM 41 C LEU D 130 188.513 235.533 191.985 1.00114.79 ATOM 42 O LEU D 130 188.808 236.472 191.247 1.00116.48 ATOM 43 CB LEU D 130 189.458 233.549 190.769 1.00102.38 ATOM 44 CG LEU D 130 190.713 233.431 191.633 1.00114.36 ATOM 45 CD1 LEU D 130 190.473 232.489 192.802 1.00114.51 ATOM 46 CD2 LEU D 130 191.840 232.915 190.751 1.00115.21 ATOM 47 N CYS D 131 188.440 235.683 193.293 1.00118.64 ATOM 48 CA CYS D 131 188.641 237.012 193.851 1.00129.76 ATOM 49 C CYS D 131 189.891 237.113 194.704 1.00138.53 ATOM 50 O CYS D 131 190.276 236.160 195.387 1.00143.09 ATOM 51 CB CYS D 131 187.423 237.425 194.665 1.00127.59 ATOM 52 SG CYS D 131 185.881 237.476 193.700 1.00126.83 ATOM 53 N VAL D 132 190.474 238.302 194.687 1.00144.77 ATOM 54 CA VAL D 132 191.631 238.632 195.506 1.00153.19 ATOM 55 C VAL D 132 191.246 238.666 196.974 1.00161.43 ATOM 56 O VAL D 132 190.189 239.180 197.341 1.00163.15 ATOM 57 CB VAL D 132 192.217 239.989 195.079 1.00148.88 ATOM 58 CG1 VAL D 132 192.666 239.916 193.626 1.00154.19 ATOM 59 CG2 VAL D 132 191.171 241.093 195.261 1.00161.11 ATOM 60 N THR D 133 192.125 238.159 197.823 1.00168.96 ATOM 61 CA THR D 133 191.882 238.074 199.255 1.00167.95 ATOM 62 C THR D 133 192.098 239.387 199.975 1.00169.95 ATOM 63 O THR D 133 193.036 239.522 200.767 1.00174.75 ATOM 64 CB THR D 133 192.831 237.072 199.891 1.00176.12 ATOM 65 OG1 THR D 133 194.158 237.503 199.628 1.00175.46 ATOM 66 CG2 THR D 133 192.615 235.699 199.287 1.00169.79 ATOM 67 N LEU D 134 191.274 240.357 199.654 1.00176.08 ATOM 68 CA LEU D 134 191.348 241.675 200.250 1.00176.01 ATOM 69 C LEU D 134 190.110 241.960 201.078 1.00179.34 ATOM 70 O LEU D 134 189.043 241.404 200.827 1.00177.28 ATOM 71 CB LEU D 134 191.514 242.726 199.172 1.00175.88 ATOM 72 CG LEU D 134 192.716 242.571 198.242 1.00171.29 ATOM 73 CD1 LEU D 134 192.637 243.667 197.205 1.00176.80 ATOM 74 CD2 LEU D 134 194.025 242.642 199.010 1.00181.29 ATOM 75 N ASN D 135 190.248 242.801 202.094 1.00182.45 ATOM 76 CA ASN D 135 189.087 243.202 202.877 1.00183.05 ATOM 77 C ASN D 135 188.529 244.477 202.279 1.00183.56 ATOM 78 O ASN D 135 189.091 245.554 202.473 1.00185.44 ATOM 79 CB ASN D 135 189.435 243.409 204.333 1.00190.39 ATOM 80 CG ASN D 135 188.216 243.716 205.154 1.00187.23 ATOM 81 OD1 ASN D 135 187.090 243.490 204.696 1.00184.11 ATOM 82 ND2 ASN D 135 188.412 244.216 206.349 1.00194.10 ATOM 83 N CYS D 136 187.464 244.352 201.505 1.00182.04 ATOM 84 CA CYS D 136 186.930 245.486 200.783 1.00177.26 ATOM 85 C CYS D 136 185.450 245.675 201.063 1.00176.01 ATOM 86 O CYS D 136 184.759 244.718 201.412 1.00172.11 ATOM 87 CB CYS D 136 187.161 245.271 199.308 1.00173.24 ATOM 88 SG CYS D 136 188.897 245.033 198.922 1.00168.53 TER ATOM 1 N LEU D 209 187.162 248.155 197.025 1.00165.25 ATOM 2 CA LEU D 209 187.092 247.404 195.778 1.00163.72 ATOM 3 C LEU D 209 187.766 246.063 195.822 1.00158.94 ATOM 4 O LEU D 209 188.976 245.964 196.023 1.00159.79 ATOM 5 CB LEU D 209 187.738 248.193 194.632 1.00160.67 ATOM 6 CG LEU D 209 187.876 247.435 193.250 1.00161.20 ATOM 7 CD1 LEU D 209 186.514 247.080 192.666 1.00163.63 ATOM 8 CD2 LEU D 209 188.650 248.316 192.292 1.00163.29 ATOM 9 N ILE D 210 186.992 245.022 195.582 1.00159.76 ATOM 10 CA ILE D 210 187.555 243.697 195.514 1.00155.62 ATOM 11 C ILE D 210 187.621 243.373 194.044 1.00153.91 ATOM 12 O ILE D 210 186.658 243.593 193.306 1.00151.66 ATOM 13 CB ILE D 210 186.733 242.645 196.297 1.00150.23 ATOM 14 CG1 ILE D 210 187.483 241.286 196.272 1.00147.29 ATOM 15 CG2 ILE D 210 185.313 242.508 195.728 1.00138.16 ATOM 16 CD1 ILE D 210 186.987 240.251 197.276 1.00137.27 ATOM 17 N ASN D 211 188.777 242.922 193.624 1.00151.11 ATOM 18 CA ASN D 211 189.028 242.596 192.244 1.00144.18 ATOM 19 C ASN D 211 188.826 241.126 191.929 1.00140.63 ATOM 20 O ASN D 211 189.518 240.255 192.461 1.00134.97 ATOM 21 CB ASN D 211 190.417 243.039 191.867 1.00148.38 ATOM 22 CG ASN D 211 190.545 244.529 191.919 1.00155.29 ATOM 23 OD1 ASN D 211 189.732 245.249 191.331 1.00160.74 ATOM 24 ND2 ASN D 211 191.550 245.010 192.608 1.00156.60 ATOM 25 N CYS D 212 187.859 240.841 191.082 1.00133.54 ATOM 26 CA CYS D 212 187.595 239.463 190.733 1.00125.94 ATOM 27 C CYS D 212 187.948 239.257 189.271 1.00119.99 ATOM 28 O CYS D 212 187.594 240.066 188.413 1.00120.42 ATOM 29 CB CYS D 212 186.158 239.118 191.062 1.00117.33 ATOM 30 SG CYS D 212 185.800 239.337 192.843 1.00130.00 ATOM 31 N ASN D 213 188.667 238.180 189.004 1.00113.08 ATOM 32 CA ASN D 213 189.153 237.846 187.676 1.00104.90 ATOM 33 C ASN D 213 188.773 236.444 187.276 1.00 97.85 ATOM 34 O ASN D 213 189.255 235.477 187.861 1.00 94.71 ATOM 35 CB ASN D 213 190.656 237.996 187.625 1.00108.54 ATOM 36 CG ASN D 213 191.106 239.409 187.798 1.00117.07 ATOM 37 OD1 ASN D 213 190.940 240.238 186.896 1.00115.11 ATOM 38 ND2 ASN D 213 191.683 239.709 188.933 1.00125.88 ATOM 39 N THR D 214 187.924 236.324 186.272 1.00 89.96 ATOM 40 CA THR D 214 187.459 235.022 185.859 1.00 79.88 ATOM 41 C THR D 214 188.613 234.174 185.362 1.00 74.91 ATOM 42 O THR D 214 189.417 234.609 184.535 1.00 78.21 ATOM 43 CB THR D 214 186.410 235.161 184.746 1.00 80.58 ATOM 44 OG1 THR D 214 185.331 235.982 185.216 1.00 80.50 ATOM 45 CG2 THR D 214 185.844 233.789 184.367 1.00 80.49 ATOM 46 N SER D 215 188.669 232.960 185.866 1.00 72.01 ATOM 47 CA SER D 215 189.660 231.974 185.507 1.00 68.93 ATOM 48 C SER D 215 189.090 231.115 184.402 1.00 67.77 ATOM 49 O SER D 215 188.000 230.548 184.543 1.00 68.23 ATOM 50 CB SER D 215 190.018 231.137 186.705 1.00 72.73 ATOM 51 OG SER D 215 190.869 230.094 186.343 1.00 68.96 ATOM 52 N VAL D 216 189.767 231.072 183.261 1.00 63.17 ATOM 53 CA VAL D 216 189.216 230.343 182.133 1.00 57.90 ATOM 54 C VAL D 216 190.069 229.183 181.687 1.00 57.51 ATOM 55 O VAL D 216 191.245 229.337 181.362 1.00 63.61 ATOM 56 CB VAL D 216 188.989 231.289 180.957 1.00 56.25 ATOM 57 CG1 VAL D 216 188.430 230.520 179.782 1.00 59.26 ATOM 58 CG2 VAL D 216 188.033 232.378 181.390 1.00 67.00 ATOM 59 N ILE D 217 189.447 228.019 181.634 1.00 54.98 ATOM 60 CA ILE D 217 190.125 226.803 181.248 1.00 55.99 ATOM 61 C ILE D 217 189.589 226.202 179.959 1.00 59.23 ATOM 62 O ILE D 217 188.392 225.937 179.831 1.00 59.61 ATOM 63 CB ILE D 217 189.992 225.761 182.360 1.00 58.07 ATOM 64 CG1 ILE D 217 190.608 226.310 183.648 1.00 67.48 ATOM 65 CG2 ILE D 217 190.668 224.456 181.930 1.00 61.87 ATOM 66 CD1 ILE D 217 190.287 225.503 184.883 1.00 81.47 ATOM 67 N THR D 218 190.486 225.949 179.012 1.00 58.20 ATOM 68 CA THR D 218 190.098 225.318 177.752 1.00 58.03 ATOM 69 C THR D 218 190.375 223.826 177.860 1.00 61.04 ATOM 70 O THR D 218 191.466 223.417 178.256 1.00 62.79 ATOM 71 CB THR D 218 190.845 225.920 176.553 1.00 57.59 ATOM 72 OG1 THR D 218 190.533 227.313 176.455 1.00 55.03 ATOM 73 CG2 THR D 218 190.391 225.243 175.282 1.00 63.87 TER