HEADER HYDROLASE 31-DEC-69 6T8A TITLE Thrombin in complex with diphenyl TITLE 2 ((4-carbamimidoylphenyl)((S)-1-((R)-3-cyclohexyl TITLE 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Prothrombin; COMPND 3 CHAIN: L; COMPND 4 EC: 3.4.21.5; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.62 ANGSTORMS DBREF 6T8A L -4 17 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 L 28 GLU ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SEQRES 2 L 28 SER LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER SEQRES 3 L 28 TYR ILE ATOM 1 N GLU L 6 15.821 17.660 19.102 1.00 52.40 ATOM 2 CA GLU L 6 15.123 18.766 18.455 1.00 49.60 ATOM 3 C GLU L 6 14.187 19.455 19.442 1.00 47.25 ATOM 4 O GLU L 6 13.632 18.817 20.338 1.00 41.49 ATOM 5 CB GLU L 6 14.338 18.274 17.235 1.00 45.11 ATOM 6 N ALA L 7 14.015 20.767 19.264 1.00 48.44 ATOM 7 CA ALA L 7 13.144 21.532 20.150 1.00 43.13 ATOM 8 C ALA L 7 11.723 20.985 20.154 1.00 33.09 ATOM 9 O ALA L 7 11.026 21.072 21.171 1.00 31.21 ATOM 10 CB ALA L 7 13.143 23.006 19.740 1.00 47.42 ATOM 11 N ASP L 8 11.282 20.407 19.041 1.00 27.96 ATOM 12 CA ASP L 8 9.934 19.878 18.920 1.00 23.35 ATOM 13 C ASP L 8 9.866 18.368 19.120 1.00 19.77 ATOM 14 O ASP L 8 8.839 17.755 18.810 1.00 20.84 ATOM 15 CB ASP L 8 9.360 20.254 17.550 1.00 29.24 ATOM 16 CG ASP L 8 7.885 20.520 17.603 1.00 41.23 ATOM 17 OD1 ASP L 8 7.504 21.465 18.323 1.00 48.87 ATOM 18 N CYS L 9 10.915 17.750 19.660 1.00 19.68 ATOM 19 CA CYS L 9 10.903 16.298 19.762 1.00 18.04 ATOM 20 C CYS L 9 9.726 15.824 20.610 1.00 15.44 ATOM 21 O CYS L 9 9.281 16.508 21.541 1.00 17.60 ATOM 22 CB CYS L 9 12.220 15.777 20.358 1.00 20.25 ATOM 23 SG CYS L 9 12.527 16.206 22.094 1.00 21.05 ATOM 24 N GLY L 10 9.229 14.628 20.282 1.00 16.33 ATOM 25 CA GLY L 10 8.257 13.961 21.127 1.00 15.91 ATOM 26 C GLY L 10 6.866 14.550 21.101 1.00 17.49 ATOM 27 O GLY L 10 6.026 14.152 21.912 1.00 17.31 ATOM 28 N LEU L 11 6.593 15.479 20.194 1.00 15.84 ATOM 29 CA LEU L 11 5.274 16.083 20.035 1.00 14.86 ATOM 30 C LEU L 11 4.753 15.653 18.671 1.00 16.88 ATOM 31 O LEU L 11 5.265 16.101 17.640 1.00 20.27 ATOM 32 CB LEU L 11 5.346 17.604 20.130 1.00 18.05 ATOM 33 CG LEU L 11 5.840 18.138 21.474 1.00 19.72 ATOM 34 CD1 LEU L 11 6.078 19.641 21.407 1.00 21.35 ATOM 35 CD2 LEU L 11 4.863 17.767 22.582 1.00 23.66 ATOM 36 N ARG L 12 3.763 14.759 18.663 1.00 16.68 ATOM 37 CA ARG L 12 3.354 14.141 17.405 1.00 14.84 ATOM 38 C ARG L 12 2.456 15.077 16.603 1.00 16.55 ATOM 39 O ARG L 12 1.487 15.614 17.146 1.00 17.04 ATOM 40 CB ARG L 12 2.620 12.842 17.666 1.00 13.52 ATOM 41 CG ARG L 12 3.476 11.816 18.390 1.00 13.59 ATOM 42 CD ARG L 12 2.628 10.646 18.839 1.00 17.03 ATOM 43 NE ARG L 12 1.690 11.037 19.896 1.00 15.42 ATOM 44 CZ ARG L 12 0.782 10.218 20.417 1.00 14.69 ATOM 45 NH1 ARG L 12 0.698 8.962 19.981 1.00 15.77 ATOM 46 NH2 ARG L 12 -0.031 10.638 21.391 1.00 15.98 ATOM 47 N PRO L 13 2.715 15.241 15.309 1.00 13.82 ATOM 48 CA PRO L 13 1.868 16.123 14.486 1.00 16.18 ATOM 49 C PRO L 13 0.391 15.804 14.567 1.00 16.49 ATOM 50 O PRO L 13 -0.428 16.733 14.583 1.00 19.74 ATOM 51 CB PRO L 13 2.415 15.894 13.071 1.00 19.94 ATOM 52 CG PRO L 13 3.848 15.538 13.289 1.00 20.94 ATOM 53 CD PRO L 13 3.874 14.724 14.558 1.00 16.78 ATOM 54 N LEU L 14 0.024 14.526 14.615 1.00 17.06 ATOM 55 CA LEU L 14 -1.391 14.180 14.549 1.00 18.28 ATOM 56 C LEU L 14 -2.021 14.015 15.918 1.00 17.98 ATOM 57 O LEU L 14 -3.216 13.699 15.996 1.00 18.45 ATOM 58 CB LEU L 14 -1.603 12.913 13.717 1.00 17.94 ATOM 59 CG LEU L 14 -1.258 13.082 12.240 1.00 19.64 ATOM 60 CD1 LEU L 14 -1.456 11.763 11.486 1.00 20.39 ATOM 61 CD2 LEU L 14 -2.088 14.207 11.628 1.00 24.12 ATOM 62 N PHE L 15 -1.261 14.252 16.994 1.00 16.00 ATOM 63 CA PHE L 15 -1.795 14.108 18.340 1.00 15.47 ATOM 64 C PHE L 15 -1.458 15.331 19.182 1.00 15.93 ATOM 65 O PHE L 15 -2.262 16.258 19.220 1.00 17.96 ATOM 66 CB PHE L 15 -1.316 12.784 18.946 1.00 15.60 ATOM 67 CG PHE L 15 -1.952 11.593 18.267 1.00 15.63 ATOM 68 CD1 PHE L 15 -1.293 10.919 17.250 1.00 19.03 ATOM 69 CD2 PHE L 15 -3.246 11.220 18.586 1.00 17.97 ATOM 70 CE1 PHE L 15 -1.911 9.850 16.590 1.00 15.97 ATOM 71 CE2 PHE L 15 -3.870 10.162 17.940 1.00 19.15 ATOM 72 CZ PHE L 15 -3.193 9.473 16.941 1.00 18.00 ATOM 73 N GLU L 16 -0.298 15.369 19.853 1.00 15.80 ATOM 74 CA GLU L 16 0.018 16.519 20.706 1.00 16.88 ATOM 75 C GLU L 16 -0.088 17.853 19.969 1.00 18.55 ATOM 76 O GLU L 16 -0.574 18.846 20.532 1.00 18.39 ATOM 77 CB GLU L 16 1.429 16.390 21.289 1.00 16.63 ATOM 78 CG GLU L 16 1.552 15.356 22.385 1.00 16.38 ATOM 79 CD GLU L 16 1.541 13.943 21.847 1.00 16.15 ATOM 80 OE1 GLU L 16 1.896 13.738 20.665 1.00 15.63 ATOM 81 OE2 GLU L 16 1.187 13.048 22.622 1.00 15.97 ATOM 82 N LYS L 17 0.386 17.914 18.719 0.52 18.25 ATOM 83 CA LYS L 17 0.405 19.198 18.021 0.52 18.57 ATOM 84 C LYS L 17 -0.987 19.736 17.725 0.52 20.05 ATOM 85 O LYS L 17 -1.131 20.939 17.478 0.52 20.79 ATOM 86 CB LYS L 17 1.190 19.094 16.715 0.52 17.22 ATOM 87 CG LYS L 17 2.691 19.085 16.905 0.52 16.36 ATOM 88 N LYS L 18 -2.011 18.884 17.719 1.00 19.50 ATOM 89 CA LYS L 18 -3.377 19.340 17.516 1.00 21.91 ATOM 90 C LYS L 18 -4.257 19.055 18.730 1.00 20.25 ATOM 91 O LYS L 18 -5.481 19.131 18.636 1.00 21.03 ATOM 92 CB LYS L 18 -3.963 18.741 16.229 1.00 26.35 ATOM 93 CG LYS L 18 -3.930 17.249 16.104 1.00 30.16 ATOM 94 CD LYS L 18 -4.004 16.820 14.619 1.00 30.43 ATOM 95 CE LYS L 18 -5.262 17.284 13.925 1.00 33.09 ATOM 96 NZ LYS L 18 -5.358 16.750 12.511 1.00 36.34 ATOM 97 N SER L 19 -3.639 18.778 19.879 1.00 18.16 ATOM 98 CA SER L 19 -4.321 18.452 21.138 1.00 17.65 ATOM 99 C SER L 19 -5.358 17.335 20.973 1.00 21.64 ATOM 100 O SER L 19 -6.482 17.417 21.480 1.00 24.03 ATOM 101 CB SER L 19 -4.949 19.699 21.761 1.00 20.16 ATOM 102 OG SER L 19 -5.178 19.476 23.144 1.00 24.71 ATOM 103 N LEU L 20 -4.961 16.268 20.273 1.00 19.04 ATOM 104 CA LEU L 20 -5.748 15.043 20.191 1.00 20.11 ATOM 105 C LEU L 20 -5.008 13.948 20.940 1.00 20.42 ATOM 106 O LEU L 20 -3.782 13.863 20.869 1.00 19.41 ATOM 107 CB LEU L 20 -5.972 14.587 18.742 1.00 16.75 ATOM 108 CG LEU L 20 -6.843 15.502 17.887 1.00 21.04 ATOM 109 CD1 LEU L 20 -6.832 15.012 16.447 1.00 20.32 ATOM 110 CD2 LEU L 20 -8.262 15.584 18.417 1.00 25.36 ATOM 111 N GLU L 21 -5.744 13.136 21.681 0.57 20.32 ATOM 112 CA GLU L 21 -5.123 12.030 22.391 0.57 18.33 ATOM 113 C GLU L 21 -5.339 10.740 21.617 0.57 16.99 ATOM 114 O GLU L 21 -6.326 10.584 20.891 0.57 20.58 ATOM 115 CB GLU L 21 -5.675 11.918 23.815 0.57 22.77 ATOM 116 CG GLU L 21 -5.215 13.073 24.694 0.57 23.66 ATOM 117 CD GLU L 21 -5.917 13.138 26.035 0.57 32.81 ATOM 118 OE1 GLU L 21 -6.800 12.294 26.304 0.57 34.80 ATOM 119 OE2 GLU L 21 -5.582 14.050 26.821 0.57 35.07 ATOM 120 N ASP L 22 -4.383 9.829 21.744 1.00 16.53 ATOM 121 CA ASP L 22 -4.540 8.516 21.143 1.00 15.66 ATOM 122 C ASP L 22 -5.325 7.620 22.105 1.00 18.50 ATOM 123 O ASP L 22 -5.646 8.010 23.230 1.00 19.72 ATOM 124 CB ASP L 22 -3.186 7.913 20.696 1.00 16.51 ATOM 125 CG ASP L 22 -2.293 7.447 21.846 1.00 18.22 ATOM 126 OD1 ASP L 22 -2.758 6.693 22.718 1.00 17.00 ATOM 127 OD2 ASP L 22 -1.085 7.780 21.830 1.00 16.73 ATOM 128 N LYS L 23 -5.693 6.427 21.632 1.00 19.20 ATOM 129 CA LYS L 23 -6.711 5.657 22.344 1.00 21.26 ATOM 130 C LYS L 23 -6.215 5.034 23.644 1.00 22.63 ATOM 131 O LYS L 23 -7.048 4.616 24.457 1.00 23.24 ATOM 132 CB LYS L 23 -7.278 4.550 21.451 1.00 22.94 ATOM 133 CG LYS L 23 -8.189 5.071 20.339 1.00 28.44 ATOM 134 CD LYS L 23 -8.574 3.961 19.376 1.00 37.18 ATOM 135 N THR L 24 -4.901 4.938 23.869 1.00 16.88 ATOM 136 CA THR L 24 -4.423 4.281 25.082 1.00 17.86 ATOM 137 C THR L 24 -3.373 5.067 25.856 1.00 16.34 ATOM 138 O THR L 24 -2.845 4.542 26.844 1.00 18.30 ATOM 139 CB THR L 24 -3.870 2.871 24.788 1.00 18.82 ATOM 140 OG1 THR L 24 -2.649 2.944 24.038 1.00 17.04 ATOM 141 CG2 THR L 24 -4.880 2.047 24.018 1.00 18.40 ATOM 142 N GLU L 25 -3.050 6.303 25.469 1.00 14.89 ATOM 143 CA GLU L 25 -2.040 7.019 26.246 1.00 16.07 ATOM 144 C GLU L 25 -2.506 7.292 27.673 1.00 18.80 ATOM 145 O GLU L 25 -1.675 7.414 28.582 1.00 18.43 ATOM 146 CB GLU L 25 -1.644 8.315 25.546 1.00 14.29 ATOM 147 CG GLU L 25 -2.782 9.286 25.259 1.00 16.50 ATOM 148 CD GLU L 25 -2.263 10.588 24.702 1.00 17.86 ATOM 149 OE1 GLU L 25 -2.221 10.745 23.459 1.00 18.16 ATOM 150 OE2 GLU L 25 -1.868 11.458 25.504 1.00 17.52 ATOM 151 N ARG L 26 -3.818 7.374 27.896 1.00 17.59 ATOM 152 CA ARG L 26 -4.317 7.566 29.255 1.00 18.36 ATOM 153 C ARG L 26 -3.905 6.412 30.171 1.00 17.65 ATOM 154 O ARG L 26 -3.697 6.624 31.373 1.00 20.11 ATOM 155 CB ARG L 26 -5.837 7.734 29.236 1.00 22.51 ATOM 156 CG ARG L 26 -6.457 7.930 30.609 1.00 26.17 ATOM 157 CD ARG L 26 -7.943 8.227 30.526 1.00 36.95 ATOM 158 NE ARG L 26 -8.222 9.402 29.702 1.00 45.04 ATOM 159 CZ ARG L 26 -8.287 10.646 30.164 1.00 50.46 ATOM 160 NH1 ARG L 26 -8.093 10.890 31.454 1.00 51.79 ATOM 161 NH2 ARG L 26 -8.547 11.647 29.334 1.00 52.19 ATOM 162 N GLU L 27 -3.775 5.191 29.630 1.00 15.76 ATOM 163 CA GLU L 27 -3.318 4.066 30.439 1.00 16.34 ATOM 164 C GLU L 27 -1.921 4.325 30.986 1.00 18.03 ATOM 165 O GLU L 27 -1.605 3.951 32.125 1.00 18.81 ATOM 166 CB GLU L 27 -3.329 2.777 29.610 1.00 19.49 ATOM 167 CG GLU L 27 -2.818 1.550 30.353 1.00 23.52 ATOM 168 CD GLU L 27 -2.752 0.311 29.469 1.00 22.96 ATOM 169 OE1 GLU L 27 -3.030 0.418 28.250 1.00 22.54 ATOM 170 OE2 GLU L 27 -2.436 -0.776 29.992 1.00 22.58 ATOM 171 N LEU L 28 -1.057 4.940 30.178 1.00 15.22 ATOM 172 CA LEU L 28 0.274 5.282 30.671 1.00 16.18 ATOM 173 C LEU L 28 0.182 6.319 31.787 1.00 15.51 ATOM 174 O LEU L 28 0.767 6.142 32.864 1.00 17.21 ATOM 175 CB LEU L 28 1.142 5.804 29.524 1.00 17.74 ATOM 176 CG LEU L 28 1.243 4.938 28.262 1.00 21.10 ATOM 177 CD1 LEU L 28 2.214 5.597 27.292 1.00 19.64 ATOM 178 CD2 LEU L 28 1.668 3.521 28.586 1.00 24.80 ATOM 179 N LEU L 29 -0.548 7.407 31.542 1.00 14.69 ATOM 180 CA LEU L 29 -0.669 8.467 32.538 1.00 15.20 ATOM 181 C LEU L 29 -1.179 7.916 33.863 1.00 17.97 ATOM 182 O LEU L 29 -0.686 8.289 34.939 1.00 18.12 ATOM 183 CB LEU L 29 -1.608 9.563 32.023 1.00 16.04 ATOM 184 CG LEU L 29 -1.918 10.726 32.969 1.00 20.35 ATOM 185 CD1 LEU L 29 -0.639 11.421 33.392 1.00 21.13 ATOM 186 CD2 LEU L 29 -2.893 11.730 32.330 1.00 24.15 ATOM 187 N GLU L 30 -2.176 7.034 33.810 1.00 16.61 ATOM 188 CA GLU L 30 -2.750 6.516 35.049 1.00 18.10 ATOM 189 C GLU L 30 -1.751 5.681 35.837 1.00 18.44 ATOM 190 O GLU L 30 -1.932 5.502 37.046 1.00 20.06 ATOM 191 CB GLU L 30 -4.000 5.696 34.734 1.00 19.71 ATOM 192 CG GLU L 30 -5.157 6.575 34.288 1.00 20.08 ATOM 193 CD GLU L 30 -6.363 5.795 33.788 1.00 22.40 ATOM 194 OE1 GLU L 30 -6.234 4.579 33.531 1.00 26.78 ATOM 195 OE2 GLU L 30 -7.440 6.413 33.650 1.00 26.39 ATOM 196 N SER L 31 -0.716 5.162 35.178 1.00 17.96 ATOM 197 CA SER L 31 0.292 4.370 35.876 1.00 17.94 ATOM 198 C SER L 31 1.363 5.234 36.518 1.00 19.06 ATOM 199 O SER L 31 2.170 4.712 37.300 1.00 20.37 ATOM 200 CB SER L 31 0.972 3.385 34.913 1.00 18.76 ATOM 201 OG SER L 31 1.851 4.074 34.034 1.00 17.45 ATOM 202 N TYR L 32 1.406 6.528 36.192 1.00 19.38 ATOM 203 CA TYR L 32 2.449 7.409 36.721 1.00 20.03 ATOM 204 C TYR L 32 1.904 8.005 38.012 1.00 24.20 ATOM 205 O TYR L 32 1.384 9.122 38.055 1.00 22.89 ATOM 206 CB TYR L 32 2.835 8.483 35.708 1.00 17.26 ATOM 207 CG TYR L 32 3.271 7.964 34.348 1.00 18.28 ATOM 208 CD1 TYR L 32 3.831 6.694 34.193 1.00 15.82 ATOM 209 CD2 TYR L 32 3.119 8.753 33.212 1.00 18.30 ATOM 210 CE1 TYR L 32 4.228 6.224 32.934 1.00 18.14 ATOM 211 CE2 TYR L 32 3.511 8.299 31.957 1.00 17.55 ATOM 212 CZ TYR L 32 4.051 7.034 31.811 1.00 17.49 ATOM 213 OH TYR L 32 4.447 6.567 30.559 1.00 19.08 ATOM 214 N ILE L 33 2.013 7.218 39.079 1.00 24.07 ATOM 215 CA ILE L 33 1.349 7.510 40.343 1.00 30.91 ATOM 216 C ILE L 33 2.311 8.222 41.280 1.00 40.46 ATOM 217 O ILE L 33 3.501 7.912 41.308 1.00 45.86 ATOM 218 CB ILE L 33 0.795 6.224 40.999 1.00 32.45 ATOM 219 CG1 ILE L 33 1.930 5.268 41.372 1.00 35.43 ATOM 220 CG2 ILE L 33 -0.192 5.532 40.083 1.00 30.76 ATOM 221 CD1 ILE L 33 1.471 4.047 42.158 1.00 40.26 TER