HEADER HYDROLASE 31-DEC-69 6Z48 TITLE Crystal structure of Thrombin in complex with macrocycle X1vE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Thrombin light chain; COMPND 3 CHAIN: L, A, C, E; COMPND 4 >sp|P00734|328-363; missing residues are not visible in the electron COMPND 5 OTHER_DETAILS: density maps / disordered regions;; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.27 ANGSTORMS DBREF 6Z48 E -4 16 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 E 29 GLU ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SEQRES 2 E 29 SER LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER SEQRES 3 E 29 TYR ILE ASP ATOM 1 N GLU E 6 -22.917 -16.464 36.510 1.00 79.51 ATOM 2 CA GLU E 6 -22.584 -15.559 37.659 1.00 79.74 ATOM 3 C GLU E 6 -22.144 -16.427 38.838 1.00 74.37 ATOM 4 O GLU E 6 -20.947 -16.604 39.083 1.00 67.68 ATOM 5 CB GLU E 6 -23.772 -14.636 37.970 1.00 84.32 ATOM 6 CG GLU E 6 -23.982 -13.506 36.957 1.00 89.64 ATOM 7 CD GLU E 6 -24.427 -13.882 35.546 1.00 86.60 ATOM 8 OE1 GLU E 6 -23.826 -13.374 34.572 1.00 67.06 ATOM 9 OE2 GLU E 6 -25.387 -14.672 35.417 1.00 89.94 ATOM 10 N ALA E 7 -23.147 -16.997 39.522 1.00 68.81 ATOM 11 CA ALA E 7 -22.973 -18.018 40.543 1.00 58.41 ATOM 12 C ALA E 7 -22.446 -19.324 39.928 1.00 49.67 ATOM 13 O ALA E 7 -21.969 -20.203 40.640 1.00 42.25 ATOM 14 CB ALA E 7 -24.293 -18.213 41.270 1.00 52.03 ATOM 15 N ASP E 8 -22.490 -19.427 38.593 1.00 45.77 ATOM 16 CA ASP E 8 -22.469 -20.706 37.905 1.00 41.48 ATOM 17 C ASP E 8 -21.229 -20.829 37.014 1.00 37.95 ATOM 18 O ASP E 8 -21.072 -21.804 36.272 1.00 34.92 ATOM 19 CB ASP E 8 -23.738 -20.813 37.060 1.00 44.51 ATOM 20 CG ASP E 8 -24.221 -22.235 36.809 1.00 48.36 ATOM 21 OD1 ASP E 8 -23.709 -23.188 37.482 1.00 47.04 ATOM 22 OD2 ASP E 8 -25.125 -22.383 35.945 1.00 45.18 ATOM 23 N CYS E 9 -20.338 -19.838 37.117 1.00 33.70 ATOM 24 CA CYS E 9 -19.226 -19.674 36.193 1.00 28.06 ATOM 25 C CYS E 9 -18.327 -20.909 36.233 1.00 25.38 ATOM 26 O CYS E 9 -18.217 -21.591 37.252 1.00 21.19 ATOM 27 CB CYS E 9 -18.383 -18.458 36.565 1.00 26.57 ATOM 28 SG CYS E 9 -17.562 -18.637 38.178 1.00 24.39 ATOM 29 N GLY E 10 -17.659 -21.160 35.100 1.00 22.19 ATOM 30 CA GLY E 10 -16.599 -22.149 35.030 1.00 19.76 ATOM 31 C GLY E 10 -17.076 -23.595 35.156 1.00 18.10 ATOM 32 O GLY E 10 -16.241 -24.477 35.312 1.00 17.48 ATOM 33 N LEU E 11 -18.385 -23.859 34.998 1.00 18.26 ATOM 34 CA LEU E 11 -18.817 -25.252 34.940 1.00 19.47 ATOM 35 C LEU E 11 -19.447 -25.503 33.586 1.00 18.21 ATOM 36 O LEU E 11 -20.460 -24.880 33.267 1.00 17.50 ATOM 37 CB LEU E 11 -19.807 -25.585 36.074 1.00 21.07 ATOM 38 CG LEU E 11 -19.195 -25.662 37.478 1.00 21.59 ATOM 39 CD1 LEU E 11 -20.281 -25.682 38.518 1.00 25.61 ATOM 40 CD2 LEU E 11 -18.290 -26.869 37.663 1.00 22.21 ATOM 41 N ARG E 12 -18.847 -26.411 32.798 1.00 17.07 ATOM 42 CA ARG E 12 -19.306 -26.515 31.410 1.00 17.58 ATOM 43 C ARG E 12 -20.528 -27.407 31.291 1.00 17.71 ATOM 44 O ARG E 12 -20.553 -28.511 31.847 1.00 20.72 ATOM 45 CB ARG E 12 -18.182 -26.974 30.481 1.00 15.84 ATOM 46 CG ARG E 12 -16.996 -26.037 30.575 1.00 13.48 ATOM 47 CD ARG E 12 -15.812 -26.661 29.886 1.00 14.63 ATOM 48 NE ARG E 12 -15.311 -27.797 30.652 1.00 14.08 ATOM 49 CZ ARG E 12 -14.363 -28.604 30.225 1.00 13.54 ATOM 50 NH1 ARG E 12 -14.000 -29.635 30.969 1.00 14.46 ATOM 51 NH2 ARG E 12 -13.759 -28.353 29.075 1.00 13.53 ATOM 52 N PRO E 13 -21.575 -26.950 30.567 1.00 18.62 ATOM 53 CA PRO E 13 -22.768 -27.765 30.339 1.00 17.49 ATOM 54 C PRO E 13 -22.488 -29.155 29.761 1.00 20.54 ATOM 55 O PRO E 13 -23.196 -30.095 30.134 1.00 19.35 ATOM 56 CB PRO E 13 -23.570 -26.907 29.351 1.00 18.12 ATOM 57 CG PRO E 13 -23.176 -25.468 29.700 1.00 15.82 ATOM 58 CD PRO E 13 -21.692 -25.595 29.982 1.00 16.28 ATOM 59 N LEU E 14 -21.457 -29.293 28.885 1.00 19.37 ATOM 60 CA LEU E 14 -21.221 -30.556 28.200 1.00 19.00 ATOM 61 C LEU E 14 -20.167 -31.425 28.913 1.00 21.27 ATOM 62 O LEU E 14 -19.873 -32.535 28.447 1.00 20.41 ATOM 63 CB LEU E 14 -20.869 -30.335 26.717 1.00 19.87 ATOM 64 CG LEU E 14 -21.925 -29.689 25.798 1.00 22.22 ATOM 65 CD1 LEU E 14 -21.399 -29.519 24.380 1.00 21.29 ATOM 66 CD2 LEU E 14 -23.236 -30.472 25.747 1.00 23.18 ATOM 67 N PHE E 15 -19.566 -30.922 30.008 1.00 19.75 ATOM 68 CA PHE E 15 -18.501 -31.642 30.699 1.00 21.38 ATOM 69 C PHE E 15 -18.827 -31.771 32.188 1.00 24.02 ATOM 70 O PHE E 15 -19.405 -32.780 32.583 1.00 24.67 ATOM 71 CB PHE E 15 -17.092 -31.137 30.356 1.00 21.30 ATOM 72 CG PHE E 15 -16.703 -31.351 28.914 1.00 20.13 ATOM 73 CD1 PHE E 15 -16.157 -32.561 28.497 1.00 20.71 ATOM 74 CD2 PHE E 15 -16.925 -30.350 27.970 1.00 18.91 ATOM 75 CE1 PHE E 15 -15.848 -32.780 27.159 1.00 20.09 ATOM 76 CE2 PHE E 15 -16.582 -30.545 26.637 1.00 19.11 ATOM 77 CZ PHE E 15 -16.052 -31.761 26.239 1.00 20.87 ATOM 78 N GLU E 16 -18.500 -30.748 32.992 1.00 22.47 ATOM 79 CA GLU E 16 -18.764 -30.789 34.424 1.00 23.11 ATOM 80 C GLU E 16 -20.252 -31.047 34.671 1.00 24.03 ATOM 81 O GLU E 16 -20.628 -31.811 35.539 1.00 22.73 ATOM 82 CB GLU E 16 -18.301 -29.500 35.111 1.00 20.49 ATOM 83 CG GLU E 16 -16.791 -29.328 35.108 1.00 20.55 ATOM 84 CD GLU E 16 -16.199 -28.812 33.796 1.00 20.01 ATOM 85 OE1 GLU E 16 -16.957 -28.221 32.986 1.00 18.71 ATOM 86 OE2 GLU E 16 -14.983 -28.958 33.604 1.00 20.02 ATOM 87 N LYS E 17 -21.127 -30.417 33.895 1.00 26.90 ATOM 88 CA LYS E 17 -22.531 -30.559 34.239 1.00 27.45 ATOM 89 C LYS E 17 -23.056 -31.952 33.917 1.00 27.03 ATOM 90 O LYS E 17 -24.132 -32.273 34.389 1.00 28.55 ATOM 91 CB LYS E 17 -23.394 -29.466 33.618 1.00 28.33 ATOM 92 CG LYS E 17 -23.059 -28.110 34.208 1.00 35.64 ATOM 93 CD LYS E 17 -24.251 -27.213 34.343 1.00 41.04 ATOM 94 CE LYS E 17 -24.212 -26.481 35.665 1.00 42.39 ATOM 95 NZ LYS E 17 -24.324 -25.029 35.424 1.00 42.59 ATOM 96 N LYS E 18 -22.330 -32.753 33.118 1.00 26.84 ATOM 97 CA LYS E 18 -22.785 -34.100 32.794 1.00 28.22 ATOM 98 C LYS E 18 -21.812 -35.157 33.320 1.00 29.64 ATOM 99 O LYS E 18 -21.996 -36.339 33.059 1.00 33.41 ATOM 100 CB LYS E 18 -22.900 -34.355 31.289 1.00 29.61 ATOM 101 CG LYS E 18 -23.644 -33.308 30.478 1.00 31.39 ATOM 102 CD LYS E 18 -23.435 -33.498 28.989 1.00 31.20 ATOM 103 CE LYS E 18 -24.030 -34.801 28.505 1.00 36.87 ATOM 104 NZ LYS E 18 -24.496 -34.715 27.098 1.00 45.98 ATOM 105 N SER E 19 -20.778 -34.748 34.050 1.00 26.31 ATOM 106 CA SER E 19 -19.866 -35.709 34.639 1.00 32.08 ATOM 107 C SER E 19 -18.893 -36.247 33.607 1.00 32.02 ATOM 108 O SER E 19 -18.338 -37.328 33.812 1.00 39.40 ATOM 109 CB SER E 19 -20.601 -36.849 35.317 1.00 35.12 ATOM 110 OG SER E 19 -21.510 -36.340 36.279 1.00 35.54 ATOM 111 N LEU E 20 -18.693 -35.509 32.508 1.00 31.71 ATOM 112 CA LEU E 20 -17.737 -35.950 31.499 1.00 29.03 ATOM 113 C LEU E 20 -16.473 -35.106 31.600 1.00 28.32 ATOM 114 O LEU E 20 -16.537 -33.909 31.855 1.00 28.83 ATOM 115 CB LEU E 20 -18.352 -35.857 30.098 1.00 27.76 ATOM 116 CG LEU E 20 -19.675 -36.596 29.911 1.00 29.96 ATOM 117 CD1 LEU E 20 -20.272 -36.348 28.517 1.00 23.15 ATOM 118 CD2 LEU E 20 -19.520 -38.089 30.234 1.00 29.96 ATOM 119 N GLU E 21 -15.328 -35.748 31.397 1.00 26.65 ATOM 120 CA GLU E 21 -14.070 -35.032 31.351 1.00 27.76 ATOM 121 C GLU E 21 -13.679 -34.820 29.890 1.00 28.41 ATOM 122 O GLU E 21 -13.989 -35.659 29.039 1.00 25.87 ATOM 123 CB GLU E 21 -13.003 -35.869 32.054 1.00 30.07 ATOM 124 CG GLU E 21 -13.336 -36.129 33.511 1.00 36.79 ATOM 125 CD GLU E 21 -12.282 -36.963 34.207 1.00 39.31 ATOM 126 OE1 GLU E 21 -12.517 -38.183 34.350 1.00 38.31 ATOM 127 OE2 GLU E 21 -11.220 -36.392 34.571 1.00 42.65 ATOM 128 N ASP E 22 -12.948 -33.730 29.621 1.00 25.35 ATOM 129 CA ASP E 22 -12.455 -33.499 28.271 1.00 24.83 ATOM 130 C ASP E 22 -11.147 -34.260 28.119 1.00 24.45 ATOM 131 O ASP E 22 -10.622 -34.792 29.086 1.00 24.89 ATOM 132 CB ASP E 22 -12.429 -32.017 27.891 1.00 21.39 ATOM 133 CG ASP E 22 -11.348 -31.242 28.629 1.00 20.83 ATOM 134 OD1 ASP E 22 -10.141 -31.656 28.555 1.00 17.57 ATOM 135 OD2 ASP E 22 -11.723 -30.254 29.289 1.00 19.32 ATOM 136 N LYS E 23 -10.613 -34.272 26.903 1.00 27.98 ATOM 137 CA LYS E 23 -9.529 -35.179 26.569 1.00 29.61 ATOM 138 C LYS E 23 -8.170 -34.806 27.166 1.00 28.00 ATOM 139 O LYS E 23 -7.270 -35.643 27.133 1.00 30.19 ATOM 140 CB LYS E 23 -9.466 -35.424 25.062 1.00 33.82 ATOM 141 CG LYS E 23 -10.372 -36.564 24.613 1.00 42.57 ATOM 142 CD LYS E 23 -10.852 -36.440 23.173 1.00 48.32 ATOM 143 CE LYS E 23 -11.625 -37.656 22.700 1.00 51.93 ATOM 144 NZ LYS E 23 -11.329 -37.988 21.284 1.00 54.24 ATOM 145 N THR E 24 -8.000 -33.609 27.754 1.00 26.98 ATOM 146 CA THR E 24 -6.675 -33.254 28.259 1.00 22.84 ATOM 147 C THR E 24 -6.703 -32.574 29.621 1.00 21.06 ATOM 148 O THR E 24 -5.647 -32.174 30.108 1.00 20.74 ATOM 149 CB THR E 24 -5.861 -32.371 27.300 1.00 21.69 ATOM 150 OG1 THR E 24 -6.580 -31.138 27.185 1.00 20.85 ATOM 151 CG2 THR E 24 -5.587 -33.031 25.963 1.00 23.75 ATOM 152 N GLU E 25 -7.881 -32.411 30.224 1.00 21.59 ATOM 153 CA GLU E 25 -7.941 -31.708 31.498 1.00 21.96 ATOM 154 C GLU E 25 -7.126 -32.441 32.563 1.00 25.87 ATOM 155 O GLU E 25 -6.510 -31.812 33.410 1.00 26.45 ATOM 156 CB GLU E 25 -9.375 -31.453 31.926 1.00 22.27 ATOM 157 CG GLU E 25 -10.200 -32.703 32.107 1.00 22.20 ATOM 158 CD GLU E 25 -11.531 -32.316 32.696 1.00 22.74 ATOM 159 OE1 GLU E 25 -12.529 -32.237 31.935 1.00 25.02 ATOM 160 OE2 GLU E 25 -11.550 -31.986 33.896 1.00 25.23 ATOM 161 N ARG E 26 -7.045 -33.768 32.461 0.45 24.61 ATOM 162 CA ARG E 26 -6.310 -34.564 33.428 0.45 25.18 ATOM 163 C ARG E 26 -4.839 -34.149 33.477 0.45 26.96 ATOM 164 O ARG E 26 -4.195 -34.242 34.519 0.45 29.25 ATOM 165 CB ARG E 26 -6.502 -36.053 33.131 0.45 23.27 ATOM 166 CG ARG E 26 -7.910 -36.564 33.409 0.45 21.39 ATOM 167 CD ARG E 26 -7.921 -38.067 33.210 0.45 20.36 ATOM 168 NE ARG E 26 -9.194 -38.641 33.587 0.45 19.19 ATOM 169 CZ ARG E 26 -9.395 -39.940 33.740 0.45 19.00 ATOM 170 NH1 ARG E 26 -8.393 -40.775 33.548 0.45 18.46 ATOM 171 NH2 ARG E 26 -10.591 -40.399 34.073 0.45 18.20 ATOM 172 N GLU E 27 -4.311 -33.668 32.353 1.00 29.18 ATOM 173 CA GLU E 27 -2.931 -33.241 32.291 1.00 29.31 ATOM 174 C GLU E 27 -2.743 -31.906 33.036 1.00 30.02 ATOM 175 O GLU E 27 -1.648 -31.633 33.531 1.00 29.70 ATOM 176 CB GLU E 27 -2.526 -33.244 30.810 1.00 31.35 ATOM 177 CG GLU E 27 -1.282 -32.431 30.513 1.00 37.02 ATOM 178 CD GLU E 27 -0.998 -32.154 29.038 1.00 42.72 ATOM 179 OE1 GLU E 27 -1.880 -32.510 28.188 1.00 42.79 ATOM 180 OE2 GLU E 27 0.129 -31.612 28.735 1.00 34.29 ATOM 181 N LEU E 28 -3.801 -31.083 33.128 1.00 27.26 ATOM 182 CA LEU E 28 -3.751 -29.863 33.925 1.00 25.99 ATOM 183 C LEU E 28 -3.642 -30.256 35.397 1.00 25.49 ATOM 184 O LEU E 28 -2.718 -29.819 36.081 1.00 28.13 ATOM 185 CB LEU E 28 -4.982 -28.976 33.662 1.00 22.95 ATOM 186 CG LEU E 28 -5.169 -28.405 32.247 1.00 22.73 ATOM 187 CD1 LEU E 28 -6.188 -27.282 32.279 1.00 23.45 ATOM 188 CD2 LEU E 28 -3.874 -27.874 31.668 1.00 21.01 ATOM 189 N LEU E 29 -4.557 -31.119 35.852 1.00 24.53 ATOM 190 CA LEU E 29 -4.666 -31.506 37.248 1.00 27.99 ATOM 191 C LEU E 29 -3.420 -32.277 37.682 1.00 28.33 ATOM 192 O LEU E 29 -2.937 -32.109 38.802 1.00 31.86 ATOM 193 CB LEU E 29 -5.914 -32.368 37.458 1.00 25.29 ATOM 194 CG LEU E 29 -7.240 -31.633 37.563 1.00 24.92 ATOM 195 CD1 LEU E 29 -7.389 -30.920 38.891 1.00 25.60 ATOM 196 CD2 LEU E 29 -7.428 -30.669 36.409 1.00 26.75 ATOM 197 N GLU E 30 -2.901 -33.105 36.783 1.00 24.88 ATOM 198 CA GLU E 30 -1.720 -33.875 37.106 1.00 27.44 ATOM 199 C GLU E 30 -0.547 -32.953 37.380 1.00 28.51 ATOM 200 O GLU E 30 0.318 -33.323 38.163 1.00 26.29 ATOM 201 CB GLU E 30 -1.314 -34.815 35.980 1.00 29.62 ATOM 202 CG GLU E 30 -1.421 -36.254 36.401 1.00 34.86 ATOM 203 CD GLU E 30 -1.725 -37.225 35.270 1.00 42.25 ATOM 204 OE1 GLU E 30 -1.319 -36.950 34.108 1.00 47.51 ATOM 205 OE2 GLU E 30 -2.383 -38.257 35.544 1.00 49.35 ATOM 206 N SER E 31 -0.518 -31.778 36.725 1.00 27.89 ATOM 207 CA SER E 31 0.592 -30.828 36.880 1.00 30.91 ATOM 208 C SER E 31 0.650 -30.201 38.291 1.00 30.45 ATOM 209 O SER E 31 1.718 -29.855 38.764 1.00 25.45 ATOM 210 CB SER E 31 0.625 -29.787 35.774 1.00 26.45 ATOM 211 OG SER E 31 -0.206 -28.688 36.122 1.00 25.55 ATOM 212 N TYR E 32 -0.457 -30.222 39.018 1.00 36.30 ATOM 213 CA TYR E 32 -0.548 -29.694 40.401 1.00 42.62 ATOM 214 C TYR E 32 0.143 -30.620 41.398 1.00 50.94 ATOM 215 O TYR E 32 0.759 -30.101 42.313 1.00 55.94 ATOM 216 CB TYR E 32 -2.005 -29.671 40.844 1.00 37.91 ATOM 217 CG TYR E 32 -2.868 -28.744 40.042 1.00 36.61 ATOM 218 CD1 TYR E 32 -2.312 -27.749 39.269 1.00 39.80 ATOM 219 CD2 TYR E 32 -4.234 -28.849 40.073 1.00 35.63 ATOM 220 CE1 TYR E 32 -3.091 -26.881 38.531 1.00 35.83 ATOM 221 CE2 TYR E 32 -5.029 -27.979 39.364 1.00 36.68 ATOM 222 CZ TYR E 32 -4.458 -26.996 38.591 1.00 34.51 ATOM 223 OH TYR E 32 -5.258 -26.163 37.897 1.00 36.04 ATOM 224 N ILE E 33 0.029 -31.938 41.197 1.00 65.71 ATOM 225 CA ILE E 33 0.590 -32.999 42.091 1.00 68.52 ATOM 226 C ILE E 33 1.864 -33.632 41.514 1.00 73.87 ATOM 227 O ILE E 33 2.726 -33.987 42.298 1.00 76.00 ATOM 228 CB ILE E 33 -0.476 -34.069 42.397 1.00 65.63 ATOM 229 CG1 ILE E 33 -1.288 -34.466 41.160 1.00 62.39 ATOM 230 CG2 ILE E 33 -1.356 -33.617 43.542 1.00 67.12 ATOM 231 CD1 ILE E 33 -2.388 -35.467 41.424 1.00 52.65 ATOM 232 N ASP E 34 1.925 -33.828 40.202 1.00 87.53 ATOM 233 CA ASP E 34 3.084 -34.396 39.464 1.00 95.66 ATOM 234 C ASP E 34 3.624 -35.641 40.180 1.00112.71 ATOM 235 O ASP E 34 3.570 -36.739 39.578 1.00126.52 ATOM 236 CB ASP E 34 4.130 -33.311 39.206 1.00 87.29 ATOM 237 CG ASP E 34 4.561 -33.172 37.758 1.00 79.38 ATOM 238 OD1 ASP E 34 3.800 -32.625 36.959 1.00 82.99 ATOM 239 OD2 ASP E 34 5.675 -33.599 37.456 1.00 70.51 TER