HEADER HYDROLASE 31-DEC-69 6Z48 TITLE Crystal structure of Thrombin in complex with macrocycle X1vE COMPND MOL_ID: 1; COMPND 2 MOLECULE: Thrombin light chain; COMPND 3 CHAIN: L, A, C, E; COMPND 4 >sp|P00734|328-363; missing residues are not visible in the electron COMPND 5 OTHER_DETAILS: density maps / disordered regions;; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.27 ANGSTORMS DBREF 6Z48 L -4 17 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 L 28 GLU ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SEQRES 2 L 28 SER LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER SEQRES 3 L 28 TYR ILE ATOM 1 N GLU L 6 6.262 3.136 -9.872 1.00 96.85 ATOM 2 CA GLU L 6 5.342 3.548 -10.985 1.00 97.46 ATOM 3 C GLU L 6 5.740 4.936 -11.495 1.00 88.73 ATOM 4 O GLU L 6 6.859 5.400 -11.257 1.00 81.20 ATOM 5 CB GLU L 6 3.866 3.483 -10.563 1.00101.69 ATOM 6 CG GLU L 6 3.512 2.286 -9.694 1.00103.99 ATOM 7 CD GLU L 6 3.473 2.572 -8.198 1.00104.09 ATOM 8 OE1 GLU L 6 4.361 2.069 -7.466 1.00 85.44 ATOM 9 OE2 GLU L 6 2.543 3.286 -7.760 1.00103.57 ATOM 10 N ALA L 7 4.783 5.587 -12.176 1.00 81.65 ATOM 11 CA ALA L 7 4.988 6.727 -13.062 1.00 68.57 ATOM 12 C ALA L 7 5.342 7.980 -12.268 1.00 63.21 ATOM 13 O ALA L 7 5.712 9.004 -12.842 1.00 56.18 ATOM 14 CB ALA L 7 3.731 6.964 -13.871 1.00 61.87 ATOM 15 N ASP L 8 5.207 7.889 -10.944 1.00 62.68 ATOM 16 CA ASP L 8 5.220 9.073 -10.106 1.00 56.10 ATOM 17 C ASP L 8 6.584 9.223 -9.427 1.00 52.56 ATOM 18 O ASP L 8 6.942 10.311 -8.960 1.00 56.87 ATOM 19 CB ASP L 8 4.019 9.065 -9.151 1.00 59.90 ATOM 20 CG ASP L 8 3.361 10.434 -9.004 1.00 70.04 ATOM 21 OD1 ASP L 8 3.936 11.443 -9.515 1.00 62.03 ATOM 22 OD2 ASP L 8 2.273 10.490 -8.377 1.00 77.40 ATOM 23 N CYS L 9 7.361 8.132 -9.419 1.00 44.53 ATOM 24 CA CYS L 9 8.605 8.034 -8.667 1.00 36.63 ATOM 25 C CYS L 9 9.446 9.300 -8.803 1.00 34.18 ATOM 26 O CYS L 9 9.519 9.902 -9.867 1.00 31.56 ATOM 27 CB CYS L 9 9.404 6.801 -9.082 1.00 32.94 ATOM 28 SG CYS L 9 10.242 6.935 -10.686 1.00 31.37 ATOM 29 N GLY L 10 10.062 9.712 -7.692 1.00 31.29 ATOM 30 CA GLY L 10 11.193 10.615 -7.771 1.00 27.51 ATOM 31 C GLY L 10 10.836 12.076 -7.573 1.00 27.84 ATOM 32 O GLY L 10 11.741 12.897 -7.418 1.00 26.81 ATOM 33 N LEU L 11 9.535 12.393 -7.580 1.00 30.29 ATOM 34 CA LEU L 11 9.118 13.778 -7.387 1.00 31.54 ATOM 35 C LEU L 11 8.416 13.900 -6.035 1.00 28.26 ATOM 36 O LEU L 11 7.499 13.147 -5.696 1.00 24.34 ATOM 37 CB LEU L 11 8.221 14.258 -8.541 1.00 35.50 ATOM 38 CG LEU L 11 8.886 14.433 -9.909 1.00 43.42 ATOM 39 CD1 LEU L 11 7.854 14.245 -11.018 1.00 47.06 ATOM 40 CD2 LEU L 11 9.564 15.796 -10.053 1.00 40.52 ATOM 41 N ARG L 12 8.891 14.870 -5.260 1.00 27.99 ATOM 42 CA ARG L 12 8.572 14.919 -3.845 1.00 27.78 ATOM 43 C ARG L 12 7.325 15.771 -3.630 1.00 29.03 ATOM 44 O ARG L 12 7.318 16.967 -3.944 1.00 30.77 ATOM 45 CB ARG L 12 9.765 15.466 -3.050 1.00 27.60 ATOM 46 CG ARG L 12 10.951 14.515 -2.985 1.00 23.78 ATOM 47 CD ARG L 12 12.124 15.205 -2.358 1.00 22.48 ATOM 48 NE ARG L 12 12.604 16.401 -3.029 1.00 20.67 ATOM 49 CZ ARG L 12 13.575 17.172 -2.535 1.00 25.89 ATOM 50 NH1 ARG L 12 13.968 18.262 -3.180 1.00 27.02 ATOM 51 NH2 ARG L 12 14.147 16.869 -1.372 1.00 27.69 ATOM 52 N PRO L 13 6.250 15.189 -3.056 1.00 28.81 ATOM 53 CA PRO L 13 5.000 15.915 -2.845 1.00 31.92 ATOM 54 C PRO L 13 5.160 17.306 -2.226 1.00 32.42 ATOM 55 O PRO L 13 4.354 18.185 -2.525 1.00 42.77 ATOM 56 CB PRO L 13 4.199 14.959 -1.932 1.00 36.84 ATOM 57 CG PRO L 13 4.716 13.573 -2.278 1.00 32.95 ATOM 58 CD PRO L 13 6.184 13.802 -2.570 1.00 29.97 ATOM 59 N LEU L 14 6.193 17.520 -1.394 1.00 32.09 ATOM 60 CA LEU L 14 6.387 18.798 -0.707 1.00 33.35 ATOM 61 C LEU L 14 7.491 19.607 -1.366 1.00 33.33 ATOM 62 O LEU L 14 7.845 20.683 -0.883 1.00 32.67 ATOM 63 CB LEU L 14 6.712 18.594 0.779 1.00 29.53 ATOM 64 CG LEU L 14 5.592 17.959 1.608 1.00 31.15 ATOM 65 CD1 LEU L 14 6.075 17.568 3.001 1.00 25.70 ATOM 66 CD2 LEU L 14 4.353 18.858 1.668 1.00 29.75 ATOM 67 N PHE L 15 8.075 19.044 -2.425 1.00 34.38 ATOM 68 CA PHE L 15 9.157 19.737 -3.102 1.00 40.20 ATOM 69 C PHE L 15 8.810 19.886 -4.581 1.00 42.15 ATOM 70 O PHE L 15 8.268 20.916 -4.976 1.00 52.56 ATOM 71 CB PHE L 15 10.547 19.204 -2.712 1.00 36.46 ATOM 72 CG PHE L 15 10.972 19.593 -1.313 1.00 33.45 ATOM 73 CD1 PHE L 15 11.552 20.828 -1.058 1.00 34.35 ATOM 74 CD2 PHE L 15 10.755 18.744 -0.233 1.00 32.31 ATOM 75 CE1 PHE L 15 11.899 21.215 0.231 1.00 32.06 ATOM 76 CE2 PHE L 15 11.106 19.126 1.057 1.00 32.21 ATOM 77 CZ PHE L 15 11.686 20.356 1.286 1.00 35.34 ATOM 78 N GLU L 16 9.074 18.858 -5.383 1.00 38.82 ATOM 79 CA GLU L 16 8.939 19.032 -6.824 1.00 37.77 ATOM 80 C GLU L 16 7.501 19.410 -7.186 1.00 36.38 ATOM 81 O GLU L 16 7.297 20.396 -7.887 1.00 37.12 ATOM 82 CB GLU L 16 9.509 17.850 -7.614 1.00 32.46 ATOM 83 CG GLU L 16 11.046 17.774 -7.564 1.00 35.68 ATOM 84 CD GLU L 16 11.624 17.299 -6.237 1.00 30.38 ATOM 85 OE1 GLU L 16 10.881 16.543 -5.547 1.00 28.01 ATOM 86 OE2 GLU L 16 12.772 17.731 -5.872 1.00 24.15 ATOM 87 N LYS L 17 6.532 18.632 -6.676 0.50 35.38 ATOM 88 CA LYS L 17 5.118 18.763 -7.003 0.50 35.14 ATOM 89 C LYS L 17 4.572 20.123 -6.569 0.50 33.08 ATOM 90 O LYS L 17 3.588 20.596 -7.121 0.50 32.30 ATOM 91 CB LYS L 17 4.282 17.681 -6.311 0.50 35.68 ATOM 92 CG LYS L 17 4.014 16.421 -7.122 0.50 35.23 ATOM 93 CD LYS L 17 4.998 15.299 -6.845 0.50 33.34 ATOM 94 CE LYS L 17 4.605 14.005 -7.524 0.50 32.24 ATOM 95 NZ LYS L 17 4.716 12.869 -6.584 0.50 29.69 ATOM 96 N LYS L 18 5.202 20.736 -5.570 1.00 31.93 ATOM 97 CA LYS L 18 4.791 22.051 -5.105 1.00 37.03 ATOM 98 C LYS L 18 5.808 23.100 -5.549 1.00 33.93 ATOM 99 O LYS L 18 5.908 24.158 -4.941 1.00 36.74 ATOM 100 CB LYS L 18 4.575 22.041 -3.586 1.00 34.85 ATOM 101 CG LYS L 18 3.297 21.344 -3.127 1.00 41.95 ATOM 102 CD LYS L 18 2.952 21.527 -1.628 1.00 44.15 ATOM 103 CE LYS L 18 3.013 22.960 -1.139 1.00 43.29 ATOM 104 NZ LYS L 18 2.680 23.078 0.300 1.00 49.00 ATOM 105 N SER L 19 6.600 22.758 -6.573 1.00 38.86 ATOM 106 CA SER L 19 7.707 23.561 -7.077 1.00 34.43 ATOM 107 C SER L 19 8.477 24.259 -5.955 1.00 32.32 ATOM 108 O SER L 19 8.668 25.469 -5.987 1.00 28.86 ATOM 109 CB SER L 19 7.194 24.527 -8.098 1.00 36.43 ATOM 110 OG SER L 19 6.416 23.824 -9.060 1.00 35.88 ATOM 111 N LEU L 20 8.937 23.481 -4.962 1.00 33.46 ATOM 112 CA LEU L 20 9.875 24.001 -3.972 1.00 36.46 ATOM 113 C LEU L 20 11.196 23.219 -4.029 1.00 38.74 ATOM 114 O LEU L 20 11.256 22.067 -4.483 1.00 37.09 ATOM 115 CB LEU L 20 9.266 23.938 -2.564 1.00 37.82 ATOM 116 CG LEU L 20 8.128 24.911 -2.236 1.00 41.38 ATOM 117 CD1 LEU L 20 7.528 24.573 -0.878 1.00 35.26 ATOM 118 CD2 LEU L 20 8.627 26.353 -2.236 1.00 38.85 ATOM 119 N GLU L 21 12.253 23.886 -3.567 1.00 34.10 ATOM 120 CA GLU L 21 13.592 23.347 -3.557 1.00 35.28 ATOM 121 C GLU L 21 14.045 23.261 -2.105 1.00 35.29 ATOM 122 O GLU L 21 13.856 24.214 -1.354 1.00 34.57 ATOM 123 CB GLU L 21 14.509 24.263 -4.365 1.00 36.78 ATOM 124 CG GLU L 21 14.369 24.079 -5.871 1.00 45.42 ATOM 125 CD GLU L 21 15.427 24.798 -6.696 1.00 56.23 ATOM 126 OE1 GLU L 21 15.550 24.490 -7.919 1.00 60.33 ATOM 127 OE2 GLU L 21 16.132 25.668 -6.121 1.00 52.44 ATOM 128 N ASP L 22 14.729 22.170 -1.778 1.00 33.63 ATOM 129 CA ASP L 22 15.276 21.957 -0.422 1.00 29.05 ATOM 130 C ASP L 22 16.554 22.777 -0.283 1.00 28.68 ATOM 131 O ASP L 22 17.097 23.226 -1.264 1.00 32.48 ATOM 132 CB ASP L 22 15.354 20.480 -0.056 1.00 25.82 ATOM 133 CG ASP L 22 16.405 19.728 -0.840 1.00 25.26 ATOM 134 OD1 ASP L 22 17.532 20.117 -0.788 1.00 20.81 ATOM 135 OD2 ASP L 22 16.053 18.782 -1.478 1.00 24.24 ATOM 136 N LYS L 23 17.030 22.914 0.934 1.00 33.88 ATOM 137 CA LYS L 23 18.172 23.808 1.219 1.00 36.61 ATOM 138 C LYS L 23 19.466 23.444 0.502 1.00 37.17 ATOM 139 O LYS L 23 20.092 24.356 0.042 1.00 36.89 ATOM 140 CB LYS L 23 18.363 23.946 2.725 1.00 43.32 ATOM 141 CG LYS L 23 17.210 24.645 3.421 1.00 47.70 ATOM 142 CD LYS L 23 16.791 23.943 4.664 1.00 57.49 ATOM 143 CE LYS L 23 15.795 24.740 5.472 1.00 59.30 ATOM 144 NZ LYS L 23 16.382 25.179 6.750 1.00 64.21 ATOM 145 N THR L 24 19.805 22.170 0.365 1.00 32.54 ATOM 146 CA THR L 24 21.136 21.836 -0.180 1.00 31.85 ATOM 147 C THR L 24 21.089 21.129 -1.527 1.00 30.72 ATOM 148 O THR L 24 22.116 20.644 -1.926 1.00 28.27 ATOM 149 CB THR L 24 21.921 20.992 0.820 1.00 29.35 ATOM 150 OG1 THR L 24 21.244 19.756 0.988 1.00 33.35 ATOM 151 CG2 THR L 24 22.059 21.676 2.152 1.00 27.56 ATOM 152 N GLU L 25 19.958 21.136 -2.215 1.00 31.93 ATOM 153 CA GLU L 25 19.899 20.449 -3.525 1.00 30.89 ATOM 154 C GLU L 25 20.589 21.266 -4.625 1.00 34.79 ATOM 155 O GLU L 25 20.802 20.694 -5.654 1.00 38.37 ATOM 156 CB GLU L 25 18.476 20.044 -3.867 1.00 30.14 ATOM 157 CG GLU L 25 17.583 21.211 -4.220 1.00 30.73 ATOM 158 CD GLU L 25 16.283 20.786 -4.849 1.00 30.18 ATOM 159 OE1 GLU L 25 15.314 20.700 -4.148 1.00 29.87 ATOM 160 OE2 GLU L 25 16.276 20.531 -6.030 1.00 33.31 ATOM 161 N ARG L 26 20.886 22.549 -4.423 0.45 33.79 ATOM 162 CA ARG L 26 21.613 23.280 -5.489 0.45 36.56 ATOM 163 C ARG L 26 23.014 22.662 -5.597 0.45 38.23 ATOM 164 O ARG L 26 23.401 22.307 -6.697 0.45 39.76 ATOM 165 CB ARG L 26 21.538 24.802 -5.306 0.45 35.41 ATOM 166 CG ARG L 26 22.016 25.337 -3.965 0.45 36.08 ATOM 167 CD ARG L 26 23.072 26.426 -4.083 0.45 35.11 ATOM 168 NE ARG L 26 22.978 27.476 -3.073 0.45 36.13 ATOM 169 CZ ARG L 26 24.011 27.988 -2.415 0.45 34.97 ATOM 170 NH1 ARG L 26 25.232 27.549 -2.666 0.45 33.53 ATOM 171 NH2 ARG L 26 23.823 28.934 -1.510 0.45 33.11 ATOM 172 N GLU L 27 23.668 22.454 -4.456 1.00 40.86 ATOM 173 CA GLU L 27 25.025 21.854 -4.281 1.00 37.43 ATOM 174 C GLU L 27 25.286 20.692 -5.247 1.00 31.62 ATOM 175 O GLU L 27 26.380 20.530 -5.711 1.00 28.56 ATOM 176 CB GLU L 27 25.112 21.340 -2.854 1.00 39.80 ATOM 177 CG GLU L 27 26.501 21.328 -2.286 1.00 44.21 ATOM 178 CD GLU L 27 26.727 20.308 -1.188 1.00 49.16 ATOM 179 OE1 GLU L 27 25.777 20.015 -0.450 1.00 42.37 ATOM 180 OE2 GLU L 27 27.859 19.857 -1.066 1.00 42.16 ATOM 181 N LEU L 28 24.315 19.825 -5.345 1.00 28.01 ATOM 182 CA LEU L 28 24.159 18.662 -6.259 1.00 31.05 ATOM 183 C LEU L 28 24.228 19.147 -7.712 1.00 32.27 ATOM 184 O LEU L 28 25.198 18.788 -8.408 1.00 31.61 ATOM 185 CB LEU L 28 22.819 17.977 -5.969 1.00 30.29 ATOM 186 CG LEU L 28 22.747 17.211 -4.649 1.00 32.70 ATOM 187 CD1 LEU L 28 21.751 16.066 -4.740 1.00 31.18 ATOM 188 CD2 LEU L 28 24.119 16.693 -4.247 1.00 30.75 ATOM 189 N LEU L 29 23.235 19.932 -8.142 1.00 35.21 ATOM 190 CA LEU L 29 23.197 20.463 -9.532 1.00 34.07 ATOM 191 C LEU L 29 24.501 21.199 -9.873 1.00 33.69 ATOM 192 O LEU L 29 25.034 20.964 -10.921 1.00 33.47 ATOM 193 CB LEU L 29 21.983 21.380 -9.679 1.00 32.66 ATOM 194 CG LEU L 29 20.633 20.700 -9.875 1.00 32.59 ATOM 195 CD1 LEU L 29 20.724 19.514 -10.802 1.00 30.02 ATOM 196 CD2 LEU L 29 20.021 20.294 -8.560 1.00 36.10 ATOM 197 N GLU L 30 25.007 22.039 -8.989 1.00 34.57 ATOM 198 CA GLU L 30 26.277 22.737 -9.286 1.00 39.43 ATOM 199 C GLU L 30 27.437 21.753 -9.403 1.00 40.39 ATOM 200 O GLU L 30 28.468 22.187 -9.831 1.00 44.33 ATOM 201 CB GLU L 30 26.662 23.771 -8.235 1.00 39.73 ATOM 202 CG GLU L 30 25.497 24.515 -7.672 1.00 49.55 ATOM 203 CD GLU L 30 25.848 25.848 -7.064 1.00 59.41 ATOM 204 OE1 GLU L 30 26.775 25.869 -6.261 1.00 66.92 ATOM 205 OE2 GLU L 30 25.178 26.843 -7.387 1.00 70.13 ATOM 206 N SER L 31 27.289 20.488 -9.034 1.00 40.98 ATOM 207 CA SER L 31 28.470 19.637 -9.155 1.00 37.97 ATOM 208 C SER L 31 28.531 18.998 -10.540 1.00 38.16 ATOM 209 O SER L 31 29.573 18.475 -10.897 1.00 37.82 ATOM 210 CB SER L 31 28.592 18.600 -8.059 1.00 29.62 ATOM 211 OG SER L 31 27.633 17.558 -8.246 1.00 29.15 ATOM 212 N TYR L 32 27.414 18.995 -11.285 1.00 40.87 ATOM 213 CA TYR L 32 27.378 18.363 -12.595 1.00 45.73 ATOM 214 C TYR L 32 28.151 19.207 -13.609 1.00 55.71 ATOM 215 O TYR L 32 28.695 18.700 -14.591 1.00 58.37 ATOM 216 CB TYR L 32 25.941 18.242 -13.103 1.00 40.03 ATOM 217 CG TYR L 32 25.062 17.289 -12.341 1.00 36.42 ATOM 218 CD1 TYR L 32 25.498 16.012 -12.035 1.00 36.42 ATOM 219 CD2 TYR L 32 23.786 17.648 -11.952 1.00 31.77 ATOM 220 CE1 TYR L 32 24.701 15.114 -11.343 1.00 34.37 ATOM 221 CE2 TYR L 32 22.980 16.766 -11.242 1.00 35.86 ATOM 222 CZ TYR L 32 23.437 15.492 -10.937 1.00 34.35 ATOM 223 OH TYR L 32 22.651 14.587 -10.286 1.00 33.48 ATOM 224 N ILE L 33 28.269 20.425 -13.348 1.00 67.06 ATOM 225 CA ILE L 33 29.130 21.404 -13.991 1.00 80.70 ATOM 226 C ILE L 33 30.488 21.410 -13.285 1.00 84.06 ATOM 227 O ILE L 33 31.531 21.504 -13.931 1.00 87.05 ATOM 228 CB ILE L 33 28.466 22.806 -13.991 1.00 79.50 ATOM 229 CG1 ILE L 33 28.157 23.356 -15.392 1.00 87.86 ATOM 230 CG2 ILE L 33 29.255 23.792 -13.144 1.00 81.41 ATOM 231 CD1 ILE L 33 26.709 23.206 -15.846 1.00 97.14 TER