HEADER OXIDOREDUCTASE/FMN Binding Protein 31-DEC-69 7MMR TITLE Crystal Structure of the Class Ie Ribonucleotide Reductase Beta-NrdI TITLE 2 complex from Aerococcus urinae in Oxidized Form with Cu(I) bound COMPND MOL_ID: 1; COMPND 2 MOLECULE: Ribonucleoside-diphosphate reductase; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.17.4.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 Protein NrdI; COMPND 8 CHAIN: E, G, F, H; COMPND 9 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.00 ANGSTORMS DBREF 7MMR C 1 337 UNP F2I8X9 F2I8X9_AERU 1 337 DBREF 7MMR G 1 142 UNP A0A178HG A0A178HGH7_ 1 142 SEQRES 1 C 305 ASN TYR TYR ASP ARG SER VAL SER PRO VAL GLU TYR ALA SEQRES 2 C 305 TYR PHE ASP GLN SER GLN ASN MET ARG ALA ILE ASN TRP SEQRES 3 C 305 ASN LYS ILE VAL ASP GLU LYS ASP LEU GLU VAL TRP ASN SEQRES 4 C 305 ARG VAL THR GLN ASN PHE TRP LEU PRO GLU ASN ILE PRO SEQRES 5 C 305 VAL SER ASN ASP LEU PRO SER TRP ASN GLU LEU ASP ASP SEQRES 6 C 305 ASP TRP GLN GLN LEU ILE THR ARG THR PHE THR GLY LEU SEQRES 7 C 305 THR LEU LEU ASP THR VAL GLN SER SER ILE GLY ASP VAL SEQRES 8 C 305 ALA GLN ILE LYS ASN SER LEU THR GLU GLN GLU GLN VAL SEQRES 9 C 305 ILE TYR ALA ASN PHE ALA PHE MET VAL GLY VAL HIS ALA SEQRES 10 C 305 ARG SER TYR GLY THR ILE PHE SER THR LEU CYS THR SER SEQRES 11 C 305 GLU GLN ILE GLU GLU ALA HIS GLU TRP VAL VAL ASP ASN SEQRES 12 C 305 GLU ALA LEU GLN ALA ARG PRO LYS ALA LEU ILE PRO PHE SEQRES 13 C 305 TYR THR ALA ASP ASP PRO LEU LYS SER LYS ILE ALA ALA SEQRES 14 C 305 ALA LEU MET PRO GLY PHE LEU LEU TYR GLY GLY PHE TYR SEQRES 15 C 305 LEU PRO PHE TYR LEU SER ALA ARG GLY LYS LEU PRO ASN SEQRES 16 C 305 THR SER ASP ILE ILE ARG LEU ILE LEU ARG ASP LYS VAL SEQRES 17 C 305 ILE HIS ASN PHE TYR SER GLY TYR LYS TYR GLN LEU LYS SEQRES 18 C 305 VAL ALA LYS LEU SER PRO GLU LYS GLN ALA GLU MET LYS SEQRES 19 C 305 GLN PHE VAL PHE ASP LEU LEU ASP LYS MET ILE GLY LEU SEQRES 20 C 305 GLU LYS THR TYR LEU HIS GLN LEU TYR ASP GLY PHE GLY SEQRES 21 C 305 LEU ALA ASP GLU ALA ILE ARG PHE SER LEU TYR ASN ALA SEQRES 22 C 305 GLY LYS PHE LEU GLN ASN LEU GLY TYR GLU SER PRO PHE SEQRES 23 C 305 THR LYS GLU GLU THR ARG ILE ALA PRO GLU VAL PHE ALA SEQRES 24 C 305 GLN LEU SER ALA ARG ALA SEQRES 1 C 4 ASP TRP ASP PHE ATOM 1 N ASP C 334 -2.920 -41.590 59.886 1.00 57.93 ATOM 2 CA ASP C 334 -4.188 -41.629 60.668 1.00 57.49 ATOM 3 C ASP C 334 -5.175 -42.611 60.019 1.00 55.69 ATOM 4 O ASP C 334 -6.367 -42.263 59.917 1.00 54.85 ATOM 5 CB ASP C 334 -4.816 -40.234 60.785 1.00 59.24 ATOM 6 CG ASP C 334 -3.954 -39.208 61.502 1.00 60.31 ATOM 7 OD1 ASP C 334 -3.424 -39.538 62.583 1.00 61.53 ATOM 8 OD2 ASP C 334 -3.820 -38.085 60.973 1.00 60.26 ATOM 9 N TRP C 335 -4.706 -43.795 59.607 1.00 54.85 ATOM 10 CA TRP C 335 -5.558 -44.878 59.042 1.00 54.25 ATOM 11 C TRP C 335 -6.363 -45.517 60.182 1.00 54.51 ATOM 12 O TRP C 335 -5.755 -45.820 61.227 1.00 54.29 ATOM 13 CB TRP C 335 -4.713 -45.918 58.290 1.00 53.10 ATOM 14 CG TRP C 335 -4.095 -45.431 57.014 1.00 52.51 ATOM 15 CD1 TRP C 335 -2.797 -45.052 56.823 1.00 52.24 ATOM 16 CD2 TRP C 335 -4.740 -45.293 55.733 1.00 51.34 ATOM 17 NE1 TRP C 335 -2.592 -44.681 55.521 1.00 51.65 ATOM 18 CE2 TRP C 335 -3.765 -44.819 54.828 1.00 51.19 ATOM 19 CE3 TRP C 335 -6.040 -45.518 55.263 1.00 50.89 ATOM 20 CZ2 TRP C 335 -4.053 -44.569 53.486 1.00 50.91 ATOM 21 CZ3 TRP C 335 -6.325 -45.267 53.938 1.00 50.56 ATOM 22 CH2 TRP C 335 -5.343 -44.800 53.063 1.00 50.58 ATOM 23 N ASP C 336 -7.674 -45.704 59.984 1.00 56.45 ATOM 24 CA ASP C 336 -8.633 -46.221 61.002 1.00 56.94 ATOM 25 C ASP C 336 -8.999 -47.680 60.701 1.00 57.15 ATOM 26 O ASP C 336 -9.934 -48.192 61.349 1.00 57.26 ATOM 27 CB ASP C 336 -9.903 -45.365 61.051 1.00 57.18 ATOM 28 CG ASP C 336 -9.754 -44.052 61.800 1.00 57.87 ATOM 29 OD1 ASP C 336 -8.647 -43.778 62.303 1.00 58.34 ATOM 30 OD2 ASP C 336 -10.755 -43.313 61.877 1.00 59.63 ATOM 31 N PHE C 337 -8.297 -48.327 59.766 1.00 57.78 ATOM 32 CA PHE C 337 -8.588 -49.709 59.300 1.00 58.13 ATOM 33 C PHE C 337 -7.365 -50.279 58.571 1.00 58.45 ATOM 34 O PHE C 337 -7.452 -51.292 57.876 1.00 59.05 ATOM 35 CB PHE C 337 -9.830 -49.709 58.405 1.00 57.89 ATOM 36 CG PHE C 337 -9.693 -48.895 57.143 1.00 57.80 ATOM 37 CD1 PHE C 337 -9.810 -47.513 57.170 1.00 57.28 ATOM 38 CD2 PHE C 337 -9.444 -49.512 55.926 1.00 57.10 ATOM 39 CE1 PHE C 337 -9.680 -46.767 56.008 1.00 57.07 ATOM 40 CE2 PHE C 337 -9.316 -48.764 54.766 1.00 56.90 ATOM 41 CZ PHE C 337 -9.434 -47.394 54.808 1.00 56.81 ATOM 42 OXT PHE C 337 -6.265 -49.739 58.664 1.00 60.08 ATOM 43 CU CU1 C 16.755 -27.123 39.911 0.89 31.19 ATOM 44 CU CU1 C 20.836 -36.897 14.919 0.77 33.93 ATOM 45 C1 GOL C 6.628 -10.451 48.113 0.96 54.76 ATOM 46 O1 GOL C 7.979 -10.905 48.131 0.96 56.12 ATOM 47 C2 GOL C 5.962 -10.635 49.461 0.96 54.08 ATOM 48 O2 GOL C 6.725 -9.967 50.463 0.96 53.00 ATOM 49 C3 GOL C 4.527 -10.147 49.503 0.96 54.56 ATOM 50 O3 GOL C 4.312 -9.031 48.643 0.96 54.98 ATOM 51 C TRS C 40.838 -45.783 34.057 0.93 51.79 ATOM 52 C1 TRS C 39.613 -46.673 34.248 0.93 51.89 ATOM 53 C2 TRS C 40.539 -44.651 33.076 0.93 51.43 ATOM 54 C3 TRS C 41.298 -45.227 35.404 0.93 52.10 ATOM 55 N TRS C 41.943 -46.632 33.488 0.93 53.35 ATOM 56 O1 TRS C 39.162 -47.239 33.026 0.93 50.79 ATOM 57 O2 TRS C 39.517 -43.785 33.548 0.93 50.01 ATOM 58 O3 TRS C 42.671 -44.862 35.399 0.93 51.84 ATOM 59 CU CU1 C 36.963 -40.038 32.538 0.71 56.58 ATOM 60 CA CA C 12.434 -54.843 25.994 1.00 38.75 ATOM 61 CA CA C 19.348 -45.228 17.689 1.00 51.45 ATOM 62 CA CA C 29.916 -32.622 49.576 1.00 47.72 ATOM 63 N1 FMN C 4.662 -37.520 42.617 1.00 21.66 ATOM 64 C2 FMN C 4.892 -38.845 42.779 1.00 21.73 ATOM 65 O2 FMN C 4.629 -39.611 41.830 1.00 22.35 ATOM 66 N3 FMN C 5.392 -39.360 43.918 1.00 21.60 ATOM 67 C4 FMN C 5.697 -38.591 44.972 1.00 21.55 ATOM 68 O4 FMN C 6.160 -39.102 46.013 1.00 21.62 ATOM 69 C4A FMN C 5.478 -37.126 44.877 1.00 21.48 ATOM 70 N5 FMN C 5.761 -36.274 45.892 1.00 21.93 ATOM 71 C5A FMN C 5.550 -34.937 45.770 1.00 21.82 ATOM 72 C6 FMN C 5.858 -34.088 46.834 1.00 21.96 ATOM 73 C7 FMN C 5.655 -32.712 46.725 1.00 22.11 ATOM 74 C7M FMN C 5.991 -31.809 47.884 1.00 22.12 ATOM 75 C8 FMN C 5.104 -32.144 45.464 1.00 22.10 ATOM 76 C8M FMN C 4.861 -30.661 45.305 1.00 22.14 ATOM 77 C9 FMN C 4.800 -32.991 44.405 1.00 21.79 ATOM 78 C9A FMN C 5.001 -34.370 44.502 1.00 21.60 ATOM 79 N10 FMN C 4.687 -35.253 43.436 1.00 21.31 ATOM 80 C10 FMN C 4.923 -36.629 43.599 1.00 21.29 ATOM 81 C1' FMN C 4.135 -34.769 42.170 1.00 21.24 ATOM 82 C2' FMN C 2.645 -34.462 42.351 1.00 20.87 ATOM 83 O2' FMN C 1.915 -35.628 42.765 1.00 21.71 ATOM 84 C3' FMN C 2.093 -33.910 41.045 1.00 20.18 ATOM 85 O3' FMN C 2.654 -32.607 40.874 1.00 19.83 ATOM 86 C4' FMN C 0.565 -33.831 40.988 1.00 19.69 ATOM 87 O4' FMN C 0.212 -33.515 39.637 1.00 19.27 ATOM 88 C5' FMN C -0.024 -32.793 41.947 1.00 19.39 ATOM 89 O5' FMN C -1.454 -32.855 41.923 1.00 19.38 ATOM 90 P FMN C -2.372 -31.650 42.487 1.00 19.00 ATOM 91 O1P FMN C -2.132 -31.613 43.973 1.00 18.45 ATOM 92 O2P FMN C -1.926 -30.402 41.770 1.00 18.47 ATOM 93 O3P FMN C -3.766 -32.088 42.111 1.00 19.34 ATOM 94 CA CA C 5.526 -32.622 39.592 1.00 36.77 TER