HEADER VIRAL PROTEIN 31-DEC-69 7OUF TITLE Structure of the STLV intasome:B56 complex bound to the TITLE 2 strand-transfer inhibitor XZ450 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Integrase; COMPND 3 CHAIN: D, E, A, B; COMPND 4 MUTATION: YES; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 7OUF B -2 297 UNP Q4QY51 Q4QY51_9STL 597 896 SEQRES 1 B 41 SER PRO ALA LYS LEU HIS SER PHE THR HIS CYS GLY GLN SEQRES 2 B 41 ALA ALA LEU THR LEU HIS GLY ALA THR THR THR GLU ALA SEQRES 3 B 41 LEU ASN ILE LEU HIS SER CYS HIS ALA CYS ARG LYS ASN SEQRES 4 B 41 ASN PRO ATOM 1 N SER A 7 129.490 139.418 153.159 1.00 30.61 ATOM 2 CA SER A 7 128.341 138.528 153.279 1.00 30.61 ATOM 3 C SER A 7 128.736 137.086 152.977 1.00 30.61 ATOM 4 O SER A 7 129.598 136.842 152.134 1.00 30.61 ATOM 5 CB SER A 7 127.217 138.976 152.344 1.00 30.61 ATOM 6 OG SER A 7 127.578 138.789 150.988 1.00 30.61 ATOM 7 N PRO A 8 128.108 136.132 153.673 1.00 23.62 ATOM 8 CA PRO A 8 128.472 134.720 153.480 1.00 23.62 ATOM 9 C PRO A 8 128.317 134.229 152.052 1.00 23.62 ATOM 10 O PRO A 8 129.149 133.432 151.595 1.00 23.62 ATOM 11 CB PRO A 8 127.513 133.984 154.427 1.00 23.62 ATOM 12 CG PRO A 8 127.161 134.993 155.462 1.00 23.62 ATOM 13 CD PRO A 8 127.100 136.301 154.732 1.00 23.62 ATOM 14 N ALA A 9 127.287 134.678 151.334 1.00 28.85 ATOM 15 CA ALA A 9 127.088 134.235 149.960 1.00 28.85 ATOM 16 C ALA A 9 128.252 134.646 149.067 1.00 28.85 ATOM 17 O ALA A 9 128.781 133.822 148.314 1.00 28.85 ATOM 18 CB ALA A 9 125.773 134.792 149.414 1.00 28.85 ATOM 19 N LYS A 10 128.671 135.911 149.150 1.00 31.27 ATOM 20 CA LYS A 10 129.805 136.370 148.355 1.00 31.27 ATOM 21 C LYS A 10 131.090 135.664 148.762 1.00 31.27 ATOM 22 O LYS A 10 131.912 135.317 147.904 1.00 31.27 ATOM 23 CB LYS A 10 129.961 137.884 148.493 1.00 31.27 ATOM 24 CG LYS A 10 128.754 138.678 148.030 1.00 31.27 ATOM 25 CD LYS A 10 128.611 138.641 146.517 1.00 31.27 ATOM 26 CE LYS A 10 127.537 139.609 146.044 1.00 31.27 ATOM 27 NZ LYS A 10 127.888 140.236 144.740 1.00 31.27 ATOM 28 N LEU A 11 131.281 135.443 150.065 1.00 18.51 ATOM 29 CA LEU A 11 132.486 134.769 150.535 1.00 18.51 ATOM 30 C LEU A 11 132.589 133.364 149.958 1.00 18.51 ATOM 31 O LEU A 11 133.658 132.949 149.498 1.00 18.51 ATOM 32 CB LEU A 11 132.503 134.725 152.062 1.00 18.51 ATOM 33 CG LEU A 11 133.701 134.003 152.681 1.00 18.51 ATOM 34 CD1 LEU A 11 135.000 134.691 152.296 1.00 18.51 ATOM 35 CD2 LEU A 11 133.563 133.915 154.189 1.00 18.51 ATOM 36 N HIS A 12 131.484 132.614 149.964 1.00 15.99 ATOM 37 CA HIS A 12 131.534 131.270 149.399 1.00 15.99 ATOM 38 C HIS A 12 131.644 131.310 147.881 1.00 15.99 ATOM 39 O HIS A 12 132.326 130.471 147.282 1.00 15.99 ATOM 40 CB HIS A 12 130.314 130.456 149.820 1.00 15.99 ATOM 41 CG HIS A 12 130.332 129.049 149.308 1.00 15.99 ATOM 42 ND1 HIS A 12 130.873 128.003 150.025 1.00 15.99 ATOM 43 CD2 HIS A 12 129.892 128.517 148.143 1.00 15.99 ATOM 44 CE1 HIS A 12 130.758 126.888 149.328 1.00 15.99 ATOM 45 NE2 HIS A 12 130.168 127.172 148.181 1.00 15.99 ATOM 46 N SER A 13 130.978 132.271 147.236 1.00 25.22 ATOM 47 CA SER A 13 131.069 132.374 145.785 1.00 25.22 ATOM 48 C SER A 13 132.486 132.699 145.335 1.00 25.22 ATOM 49 O SER A 13 132.878 132.346 144.217 1.00 25.22 ATOM 50 CB SER A 13 130.093 133.432 145.274 1.00 25.22 ATOM 51 OG SER A 13 130.562 134.736 145.563 1.00 25.22 ATOM 52 N PHE A 14 133.266 133.368 146.183 1.00 36.83 ATOM 53 CA PHE A 14 134.632 133.717 145.816 1.00 36.83 ATOM 54 C PHE A 14 135.654 132.674 146.258 1.00 36.83 ATOM 55 O PHE A 14 136.631 132.431 145.543 1.00 36.83 ATOM 56 CB PHE A 14 135.001 135.081 146.402 1.00 36.83 ATOM 57 CG PHE A 14 136.366 135.562 146.003 1.00 36.83 ATOM 58 CD1 PHE A 14 136.782 135.489 144.685 1.00 36.83 ATOM 59 CD2 PHE A 14 137.231 136.090 146.944 1.00 36.83 ATOM 60 CE1 PHE A 14 138.035 135.929 144.315 1.00 36.83 ATOM 61 CE2 PHE A 14 138.485 136.532 146.579 1.00 36.83 ATOM 62 CZ PHE A 14 138.887 136.452 145.264 1.00 36.83 ATOM 63 N THR A 15 135.456 132.045 147.417 1.00 24.81 ATOM 64 CA THR A 15 136.448 131.131 147.971 1.00 24.81 ATOM 65 C THR A 15 136.023 129.671 147.971 1.00 24.81 ATOM 66 O THR A 15 136.890 128.796 147.959 1.00 24.81 ATOM 67 CB THR A 15 136.800 131.533 149.408 1.00 24.81 ATOM 68 OG1 THR A 15 135.766 131.095 150.296 1.00 24.81 ATOM 69 CG2 THR A 15 136.949 133.041 149.517 1.00 24.81 ATOM 70 N HIS A 16 134.719 129.390 147.990 1.00 39.21 ATOM 71 CA HIS A 16 134.196 128.022 147.991 1.00 39.21 ATOM 72 C HIS A 16 134.748 127.211 149.162 1.00 39.21 ATOM 73 O HIS A 16 135.233 126.090 149.001 1.00 39.21 ATOM 74 CB HIS A 16 134.474 127.324 146.658 1.00 39.21 ATOM 75 CG HIS A 16 133.418 127.559 145.625 1.00 39.21 ATOM 76 ND1 HIS A 16 132.254 126.823 145.573 1.00 39.21 ATOM 77 CD2 HIS A 16 133.347 128.449 144.609 1.00 39.21 ATOM 78 CE1 HIS A 16 131.512 127.249 144.567 1.00 39.21 ATOM 79 NE2 HIS A 16 132.152 128.235 143.966 1.00 39.21 ATOM 80 N CYS A 17 134.670 127.791 150.352 1.00 35.75 ATOM 81 CA CYS A 17 135.080 127.102 151.564 1.00 35.75 ATOM 82 C CYS A 17 133.899 126.347 152.169 1.00 35.75 ATOM 83 O CYS A 17 132.751 126.486 151.743 1.00 35.75 ATOM 84 CB CYS A 17 135.672 128.092 152.567 1.00 35.75 ATOM 85 SG CYS A 17 134.622 129.511 152.936 1.00 35.75 ATOM 86 N GLY A 18 134.197 125.531 153.179 1.00 29.12 ATOM 87 CA GLY A 18 133.200 124.676 153.784 1.00 29.12 ATOM 88 C GLY A 18 132.202 125.438 154.631 1.00 29.12 ATOM 89 O GLY A 18 132.368 126.615 154.949 1.00 29.12 ATOM 90 N GLN A 19 131.131 124.732 155.004 1.00 39.84 ATOM 91 CA GLN A 19 130.071 125.353 155.793 1.00 39.84 ATOM 92 C GLN A 19 130.560 125.731 157.186 1.00 39.84 ATOM 93 O GLN A 19 130.163 126.769 157.729 1.00 39.84 ATOM 94 CB GLN A 19 128.861 124.420 155.872 1.00 39.84 ATOM 95 CG GLN A 19 129.146 123.057 156.482 1.00 39.84 ATOM 96 CD GLN A 19 128.845 123.008 157.967 1.00 39.84 ATOM 97 OE1 GLN A 19 127.967 123.718 158.458 1.00 39.84 ATOM 98 NE2 GLN A 19 129.574 122.167 158.691 1.00 39.84 ATOM 99 N ALA A 20 131.421 124.904 157.782 1.00 33.80 ATOM 100 CA ALA A 20 131.964 125.237 159.093 1.00 33.80 ATOM 101 C ALA A 20 132.831 126.486 159.035 1.00 33.80 ATOM 102 O ALA A 20 132.999 127.171 160.050 1.00 33.80 ATOM 103 CB ALA A 20 132.755 124.055 159.648 1.00 33.80 ATOM 104 N ALA A 21 133.397 126.792 157.866 1.00 32.05 ATOM 105 CA ALA A 21 134.083 128.066 157.686 1.00 32.05 ATOM 106 C ALA A 21 133.094 129.225 157.692 1.00 32.05 ATOM 107 O ALA A 21 133.376 130.286 158.259 1.00 32.05 ATOM 108 CB ALA A 21 134.887 128.053 156.387 1.00 32.05 ATOM 109 N LEU A 22 131.932 129.039 157.063 1.00 28.58 ATOM 110 CA LEU A 22 130.918 130.088 157.056 1.00 28.58 ATOM 111 C LEU A 22 130.319 130.299 158.438 1.00 28.58 ATOM 112 O LEU A 22 129.885 131.410 158.760 1.00 28.58 ATOM 113 CB LEU A 22 129.812 129.756 156.052 1.00 28.58 ATOM 114 CG LEU A 22 130.029 130.099 154.575 1.00 28.58 ATOM 115 CD1 LEU A 22 130.154 131.598 154.400 1.00 28.58 ATOM 116 CD2 LEU A 22 131.225 129.390 153.969 1.00 28.58 ATOM 117 N THR A 23 130.278 129.251 159.263 1.00 39.22 ATOM 118 CA THR A 23 129.704 129.391 160.597 1.00 39.22 ATOM 119 C THR A 23 130.521 130.339 161.468 1.00 39.22 ATOM 120 O THR A 23 129.954 131.039 162.314 1.00 39.22 ATOM 121 CB THR A 23 129.585 128.026 161.272 1.00 39.22 ATOM 122 OG1 THR A 23 130.868 127.390 161.297 1.00 39.22 ATOM 123 CG2 THR A 23 128.601 127.147 160.519 1.00 39.22 ATOM 124 N LEU A 24 131.844 130.373 161.285 1.00 39.70 ATOM 125 CA LEU A 24 132.669 131.330 162.013 1.00 39.70 ATOM 126 C LEU A 24 132.340 132.769 161.643 1.00 39.70 ATOM 127 O LEU A 24 132.641 133.681 162.420 1.00 39.70 ATOM 128 CB LEU A 24 134.151 131.054 161.760 1.00 39.70 ATOM 129 CG LEU A 24 134.813 130.027 162.680 1.00 39.70 ATOM 130 CD1 LEU A 24 136.285 129.875 162.343 1.00 39.70 ATOM 131 CD2 LEU A 24 134.634 130.424 164.137 1.00 39.70 ATOM 132 N HIS A 25 131.740 132.990 160.479 1.00 48.47 ATOM 133 CA HIS A 25 131.245 134.298 160.083 1.00 48.47 ATOM 134 C HIS A 25 129.786 134.433 160.517 1.00 48.47 ATOM 135 O HIS A 25 129.280 133.647 161.322 1.00 48.47 ATOM 136 CB HIS A 25 131.438 134.496 158.583 1.00 48.47 ATOM 137 CG HIS A 25 132.867 134.405 158.147 1.00 48.47 ATOM 138 ND1 HIS A 25 133.759 135.443 158.304 1.00 48.47 ATOM 139 CD2 HIS A 25 133.566 133.390 157.588 1.00 48.47 ATOM 140 CE1 HIS A 25 134.942 135.078 157.843 1.00 48.47 ATOM 141 NE2 HIS A 25 134.852 133.836 157.403 1.00 48.47 ATOM 142 N GLY A 26 129.092 135.443 159.989 1.00 46.65 ATOM 143 CA GLY A 26 127.744 135.742 160.442 1.00 46.65 ATOM 144 C GLY A 26 126.731 134.643 160.191 1.00 46.65 ATOM 145 O GLY A 26 125.667 134.642 160.818 1.00 46.65 ATOM 146 N ALA A 27 127.031 133.712 159.290 1.00 42.40 ATOM 147 CA ALA A 27 126.078 132.662 158.957 1.00 42.40 ATOM 148 C ALA A 27 125.908 131.683 160.113 1.00 42.40 ATOM 149 O ALA A 27 126.865 131.355 160.821 1.00 42.40 ATOM 150 CB ALA A 27 126.528 131.915 157.703 1.00 42.40 ATOM 151 N THR A 28 124.677 131.220 160.301 1.00 51.62 ATOM 152 CA THR A 28 124.347 130.184 161.267 1.00 51.62 ATOM 153 C THR A 28 124.289 128.839 160.541 1.00 51.62 ATOM 154 O THR A 28 124.231 128.776 159.311 1.00 51.62 ATOM 155 CB THR A 28 123.019 130.519 161.964 1.00 51.62 ATOM 156 OG1 THR A 28 123.095 131.843 162.504 1.00 51.62 ATOM 157 CG2 THR A 28 122.729 129.568 163.121 1.00 51.62 ATOM 158 N THR A 29 124.304 127.754 161.323 1.00 52.86 ATOM 159 CA THR A 29 124.499 126.418 160.764 1.00 52.86 ATOM 160 C THR A 29 123.459 126.079 159.700 1.00 52.86 ATOM 161 O THR A 29 123.792 125.476 158.673 1.00 52.86 ATOM 162 CB THR A 29 124.467 125.378 161.883 1.00 52.86 ATOM 163 OG1 THR A 29 123.189 125.409 162.530 1.00 52.86 ATOM 164 CG2 THR A 29 125.552 125.668 162.907 1.00 52.86 ATOM 165 N THR A 30 122.197 126.451 159.922 1.00 54.47 ATOM 166 CA THR A 30 121.149 126.064 158.981 1.00 54.47 ATOM 167 C THR A 30 121.316 126.764 157.633 1.00 54.47 ATOM 168 O THR A 30 121.303 126.113 156.580 1.00 54.47 ATOM 169 CB THR A 30 119.764 126.326 159.590 1.00 54.47 ATOM 170 OG1 THR A 30 118.743 125.958 158.653 1.00 54.47 ATOM 171 CG2 THR A 30 119.591 127.781 160.021 1.00 54.47 ATOM 172 N GLU A 31 121.509 128.085 157.636 1.00 58.60 ATOM 173 CA GLU A 31 121.732 128.763 156.366 1.00 58.60 ATOM 174 C GLU A 31 123.118 128.472 155.811 1.00 58.60 ATOM 175 O GLU A 31 123.322 128.556 154.596 1.00 58.60 ATOM 176 CB GLU A 31 121.512 130.272 156.501 1.00 58.60 ATOM 177 CG GLU A 31 122.537 131.006 157.336 1.00 58.60 ATOM 178 CD GLU A 31 122.052 131.261 158.745 1.00 58.60 ATOM 179 OE1 GLU A 31 121.214 130.479 159.238 1.00 58.60 ATOM 180 OE2 GLU A 31 122.500 132.254 159.356 1.00 58.60 ATOM 181 N ALA A 32 124.072 128.108 156.671 1.00 50.86 ATOM 182 CA ALA A 32 125.357 127.633 156.173 1.00 50.86 ATOM 183 C ALA A 32 125.182 126.374 155.335 1.00 50.86 ATOM 184 O ALA A 32 125.723 126.275 154.229 1.00 50.86 ATOM 185 CB ALA A 32 126.314 127.375 157.336 1.00 50.86 ATOM 186 N LEU A 33 124.404 125.410 155.837 1.00 56.30 ATOM 187 CA LEU A 33 124.122 124.205 155.064 1.00 56.30 ATOM 188 C LEU A 33 123.311 124.527 153.816 1.00 56.30 ATOM 189 O LEU A 33 123.509 123.913 152.759 1.00 56.30 ATOM 190 CB LEU A 33 123.388 123.184 155.933 1.00 56.30 ATOM 191 CG LEU A 33 124.260 122.309 156.835 1.00 56.30 ATOM 192 CD1 LEU A 33 123.436 121.710 157.963 1.00 56.30 ATOM 193 CD2 LEU A 33 124.940 121.216 156.026 1.00 56.30 ATOM 194 N ASN A 34 122.383 125.483 153.922 1.00 63.03 ATOM 195 CA ASN A 34 121.600 125.881 152.755 1.00 63.03 ATOM 196 C ASN A 34 122.494 126.424 151.647 1.00 63.03 ATOM 197 O ASN A 34 122.362 126.030 150.482 1.00 63.03 ATOM 198 CB ASN A 34 120.550 126.917 153.156 1.00 63.03 ATOM 199 CG ASN A 34 119.440 126.324 154.001 1.00 63.03 ATOM 200 OD1 ASN A 34 119.473 125.145 154.353 1.00 63.03 ATOM 201 ND2 ASN A 34 118.447 127.141 154.331 1.00 63.03 ATOM 202 N ILE A 35 123.420 127.321 151.992 1.00 51.81 ATOM 203 CA ILE A 35 124.348 127.855 151.000 1.00 51.81 ATOM 204 C ILE A 35 125.288 126.765 150.500 1.00 51.81 ATOM 205 O ILE A 35 125.664 126.754 149.321 1.00 51.81 ATOM 206 CB ILE A 35 125.123 129.052 151.584 1.00 51.81 ATOM 207 CG1 ILE A 35 124.157 130.173 151.968 1.00 51.81 ATOM 208 CG2 ILE A 35 126.150 129.569 150.591 1.00 51.81 ATOM 209 CD1 ILE A 35 124.807 131.305 152.728 1.00 51.81 ATOM 210 N LEU A 36 125.683 125.836 151.374 1.00 58.26 ATOM 211 CA LEU A 36 126.575 124.759 150.958 1.00 58.26 ATOM 212 C LEU A 36 125.922 123.880 149.897 1.00 58.26 ATOM 213 O LEU A 36 126.554 123.524 148.896 1.00 58.26 ATOM 214 CB LEU A 36 126.988 123.923 152.169 1.00 58.26 ATOM 215 CG LEU A 36 128.272 123.111 151.996 1.00 58.26 ATOM 216 CD1 LEU A 36 129.489 124.021 152.014 1.00 58.26 ATOM 217 CD2 LEU A 36 128.384 122.032 153.062 1.00 58.26 ATOM 218 N HIS A 37 124.655 123.523 150.095 1.00 68.41 ATOM 219 CA HIS A 37 123.964 122.677 149.131 1.00 68.41 ATOM 220 C HIS A 37 123.289 123.476 148.023 1.00 68.41 ATOM 221 O HIS A 37 122.677 122.877 147.133 1.00 68.41 ATOM 222 CB HIS A 37 122.934 121.781 149.835 1.00 68.41 ATOM 223 CG HIS A 37 121.589 122.414 150.017 1.00 68.41 ATOM 224 ND1 HIS A 37 120.647 122.466 149.011 1.00 68.41 ATOM 225 CD2 HIS A 37 121.019 123.002 151.095 1.00 68.41 ATOM 226 CE1 HIS A 37 119.562 123.071 149.457 1.00 68.41 ATOM 227 NE2 HIS A 37 119.761 123.407 150.719 1.00 68.41 ATOM 228 N SER A 38 123.384 124.802 148.053 1.00 60.13 ATOM 229 CA SER A 38 122.851 125.640 146.989 1.00 60.13 ATOM 230 C SER A 38 123.870 125.935 145.896 1.00 60.13 ATOM 231 O SER A 38 123.548 126.663 144.952 1.00 60.13 ATOM 232 CB SER A 38 122.327 126.958 147.568 1.00 60.13 ATOM 233 OG SER A 38 121.879 127.821 146.537 1.00 60.13 ATOM 234 N CYS A 39 125.080 125.395 145.997 1.00 59.67 ATOM 235 CA CYS A 39 126.128 125.622 145.010 1.00 59.67 ATOM 236 C CYS A 39 126.250 124.403 144.107 1.00 59.67 ATOM 237 O CYS A 39 126.339 123.270 144.593 1.00 59.67 ATOM 238 CB CYS A 39 127.466 125.913 145.690 1.00 59.67 ATOM 239 SG CYS A 39 128.726 126.604 144.593 1.00 59.67 ATOM 240 N HIS A 40 126.252 124.639 142.794 1.00 67.28 ATOM 241 CA HIS A 40 126.316 123.534 141.843 1.00 67.28 ATOM 242 C HIS A 40 127.641 122.789 141.943 1.00 67.28 ATOM 243 O HIS A 40 127.676 121.556 141.866 1.00 67.28 ATOM 244 CB HIS A 40 126.097 124.051 140.422 1.00 67.28 ATOM 245 CG HIS A 40 125.937 122.966 139.403 1.00 67.28 ATOM 246 ND1 HIS A 40 124.798 122.195 139.311 1.00 67.28 ATOM 247 CD2 HIS A 40 126.771 122.521 138.434 1.00 67.28 ATOM 248 CE1 HIS A 40 124.938 121.322 138.329 1.00 67.28 ATOM 249 NE2 HIS A 40 126.127 121.499 137.781 1.00 67.28 ATOM 250 N ALA A 41 128.744 123.520 142.111 1.00 62.60 ATOM 251 CA ALA A 41 130.058 122.893 142.164 1.00 62.60 ATOM 252 C ALA A 41 130.337 122.202 143.491 1.00 62.60 ATOM 253 O ALA A 41 131.231 121.352 143.553 1.00 62.60 ATOM 254 CB ALA A 41 131.148 123.931 141.892 1.00 62.60 ATOM 255 N CYS A 42 129.598 122.538 144.547 1.00 61.22 ATOM 256 CA CYS A 42 129.863 121.990 145.871 1.00 61.22 ATOM 257 C CYS A 42 129.002 120.784 146.215 1.00 61.22 ATOM 258 O CYS A 42 129.416 119.960 147.036 1.00 61.22 ATOM 259 CB CYS A 42 129.665 123.071 146.940 1.00 61.22 ATOM 260 SG CYS A 42 130.748 124.509 146.754 1.00 61.22 ATOM 261 N ARG A 43 127.822 120.657 145.616 1.00 71.82 ATOM 262 CA ARG A 43 126.948 119.524 145.901 1.00 71.82 ATOM 263 C ARG A 43 127.478 118.249 145.253 1.00 71.82 ATOM 264 O ARG A 43 127.615 117.217 145.911 1.00 71.82 ATOM 265 CB ARG A 43 125.523 119.803 145.420 1.00 71.82 ATOM 266 CG ARG A 43 125.345 119.709 143.914 1.00 71.82 ATOM 267 CD ARG A 43 123.874 119.631 143.538 1.00 71.82 ATOM 268 NE ARG A 43 123.201 120.916 143.683 1.00 71.82 ATOM 269 CZ ARG A 43 121.899 121.103 143.514 1.00 71.82 ATOM 270 NH1 ARG A 43 121.094 120.104 143.193 1.00 71.82 ATOM 271 NH2 ARG A 43 121.393 122.323 143.671 1.00 71.82 ATOM 272 ZN ZN A 130.343 126.710 146.217 1.00 74.12 TER