HEADER RIBOSOME 31-DEC-69 7OYA TITLE Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome COMPND MOL_ID: 70; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: n1; EXPDTA ELECTRON MICROSCOPY DBREF 7OYA n 1 25 UNP A0A0R4IL A0A0R4ILF4_ 1 25 SEQRES 1 n1 24 ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU LYS SEQRES 2 n1 24 ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N ARG n 2 243.696 275.821 301.915 1.00 38.39 ATOM 2 CA ARG n 2 243.059 274.543 302.203 1.00 38.39 ATOM 3 C ARG n 2 244.106 273.450 302.362 1.00 38.39 ATOM 4 O ARG n 2 245.118 273.445 301.664 1.00 38.39 ATOM 5 CB ARG n 2 242.073 274.172 301.096 1.00 38.39 ATOM 6 CG ARG n 2 241.230 272.941 301.387 1.00 38.39 ATOM 7 CD ARG n 2 240.226 273.209 302.486 1.00 38.39 ATOM 8 NE ARG n 2 239.281 272.108 302.651 1.00 38.39 ATOM 9 CZ ARG n 2 238.116 272.024 302.018 1.00 38.39 ATOM 10 NH1 ARG n 2 237.317 270.989 302.230 1.00 38.39 ATOM 11 NH2 ARG n 2 237.749 272.975 301.172 1.00 38.39 ATOM 12 N ALA n 3 243.859 272.527 303.290 1.00 37.44 ATOM 13 CA ALA n 3 244.769 271.413 303.517 1.00 37.44 ATOM 14 C ALA n 3 244.360 270.158 302.764 1.00 37.44 ATOM 15 O ALA n 3 245.216 269.313 302.476 1.00 37.44 ATOM 16 CB ALA n 3 244.860 271.100 305.013 1.00 37.44 ATOM 17 N LYS n 4 243.075 270.013 302.437 1.00 36.97 ATOM 18 CA LYS n 4 242.628 268.820 301.727 1.00 36.97 ATOM 19 C LYS n 4 243.061 268.839 300.268 1.00 36.97 ATOM 20 O LYS n 4 243.204 267.776 299.653 1.00 36.97 ATOM 21 CB LYS n 4 241.109 268.682 301.832 1.00 36.97 ATOM 22 CG LYS n 4 240.577 267.332 301.383 1.00 36.97 ATOM 23 CD LYS n 4 239.089 267.202 301.646 1.00 36.97 ATOM 24 CE LYS n 4 238.298 268.180 300.806 1.00 36.97 ATOM 25 NZ LYS n 4 236.836 268.047 301.040 1.00 36.97 ATOM 26 N TRP n 5 243.279 270.025 299.696 1.00 38.56 ATOM 27 CA TRP n 5 243.730 270.095 298.312 1.00 38.56 ATOM 28 C TRP n 5 245.240 269.944 298.198 1.00 38.56 ATOM 29 O TRP n 5 245.733 269.470 297.168 1.00 38.56 ATOM 30 CB TRP n 5 243.282 271.406 297.663 1.00 38.56 ATOM 31 CG TRP n 5 241.804 271.696 297.762 1.00 38.56 ATOM 32 CD1 TRP n 5 241.233 272.900 298.041 1.00 38.56 ATOM 33 CD2 TRP n 5 240.718 270.774 297.574 1.00 38.56 ATOM 34 NE1 TRP n 5 239.866 272.791 298.045 1.00 38.56 ATOM 35 CE2 TRP n 5 239.524 271.496 297.760 1.00 38.56 ATOM 36 CE3 TRP n 5 240.639 269.412 297.267 1.00 38.56 ATOM 37 CZ2 TRP n 5 238.271 270.904 297.652 1.00 38.56 ATOM 38 CZ3 TRP n 5 239.394 268.828 297.163 1.00 38.56 ATOM 39 CH2 TRP n 5 238.227 269.572 297.354 1.00 38.56 ATOM 40 N ARG n 6 245.988 270.343 299.228 1.00 37.95 ATOM 41 CA ARG n 6 247.418 270.055 299.245 1.00 37.95 ATOM 42 C ARG n 6 247.664 268.555 299.310 1.00 37.95 ATOM 43 O ARG n 6 248.610 268.046 298.700 1.00 37.95 ATOM 44 CB ARG n 6 248.085 270.761 300.423 1.00 37.95 ATOM 45 CG ARG n 6 247.892 272.265 300.423 1.00 37.95 ATOM 46 CD ARG n 6 248.549 272.912 299.215 1.00 37.95 ATOM 47 NE ARG n 6 248.047 274.262 298.985 1.00 37.95 ATOM 48 CZ ARG n 6 247.123 274.569 298.081 1.00 37.95 ATOM 49 NH1 ARG n 6 246.605 273.621 297.313 1.00 37.95 ATOM 50 NH2 ARG n 6 246.721 275.824 297.942 1.00 37.95 ATOM 51 N LYS n 7 246.818 267.833 300.048 1.00 35.30 ATOM 52 CA LYS n 7 246.888 266.378 300.053 1.00 35.30 ATOM 53 C LYS n 7 246.493 265.799 298.703 1.00 35.30 ATOM 54 O LYS n 7 247.056 264.786 298.275 1.00 35.30 ATOM 55 CB LYS n 7 245.991 265.821 301.159 1.00 35.30 ATOM 56 CG LYS n 7 246.039 264.314 301.316 1.00 35.30 ATOM 57 CD LYS n 7 245.169 263.865 302.477 1.00 35.30 ATOM 58 CE LYS n 7 245.298 262.374 302.719 1.00 35.30 ATOM 59 NZ LYS n 7 244.506 261.931 303.898 1.00 35.30 ATOM 60 N LYS n 8 245.536 266.429 298.018 1.00 36.27 ATOM 61 CA LYS n 8 245.136 265.960 296.696 1.00 36.27 ATOM 62 C LYS n 8 246.235 266.185 295.667 1.00 36.27 ATOM 63 O LYS n 8 246.393 265.378 294.744 1.00 36.27 ATOM 64 CB LYS n 8 243.848 266.659 296.263 1.00 36.27 ATOM 65 CG LYS n 8 243.236 266.119 294.982 1.00 36.27 ATOM 66 CD LYS n 8 241.955 266.861 294.640 1.00 36.27 ATOM 67 CE LYS n 8 241.286 266.279 293.407 1.00 36.27 ATOM 68 NZ LYS n 8 240.866 264.868 293.620 1.00 36.27 ATOM 69 N ARG n 9 247.000 267.270 295.805 1.00 37.96 ATOM 70 CA ARG n 9 248.103 267.517 294.883 1.00 37.96 ATOM 71 C ARG n 9 249.241 266.532 295.107 1.00 37.96 ATOM 72 O ARG n 9 249.836 266.036 294.144 1.00 37.96 ATOM 73 CB ARG n 9 248.600 268.953 295.030 1.00 37.96 ATOM 74 CG ARG n 9 247.679 269.992 294.422 1.00 37.96 ATOM 75 CD ARG n 9 248.147 271.397 294.752 1.00 37.96 ATOM 76 NE ARG n 9 249.568 271.577 294.478 1.00 37.96 ATOM 77 CZ ARG n 9 250.227 272.713 294.680 1.00 37.96 ATOM 78 NH1 ARG n 9 251.521 272.789 294.405 1.00 37.96 ATOM 79 NH2 ARG n 9 249.592 273.773 295.156 1.00 37.96 ATOM 80 N MET n 10 249.561 266.237 296.370 1.00 37.89 ATOM 81 CA MET n 10 250.612 265.267 296.651 1.00 37.89 ATOM 82 C MET n 10 250.231 263.877 296.164 1.00 37.89 ATOM 83 O MET n 10 251.097 263.120 295.715 1.00 37.89 ATOM 84 CB MET n 10 250.922 265.238 298.147 1.00 37.89 ATOM 85 CG MET n 10 251.455 266.550 298.695 1.00 37.89 ATOM 86 SD MET n 10 252.891 267.157 297.790 1.00 37.89 ATOM 87 CE MET n 10 254.035 265.800 298.022 1.00 37.89 ATOM 88 N ARG n 11 248.946 263.525 296.243 1.00 36.27 ATOM 89 CA ARG n 11 248.498 262.254 295.686 1.00 36.27 ATOM 90 C ARG n 11 248.672 262.229 294.174 1.00 36.27 ATOM 91 O ARG n 11 249.099 261.218 293.607 1.00 36.27 ATOM 92 CB ARG n 11 247.040 261.998 296.065 1.00 36.27 ATOM 93 CG ARG n 11 246.833 261.646 297.525 1.00 36.27 ATOM 94 CD ARG n 11 245.363 261.686 297.896 1.00 36.27 ATOM 95 NE ARG n 11 245.139 261.244 299.268 1.00 36.27 ATOM 96 CZ ARG n 11 244.765 260.014 299.603 1.00 36.27 ATOM 97 NH1 ARG n 11 244.565 259.103 298.662 1.00 36.27 ATOM 98 NH2 ARG n 11 244.585 259.695 300.876 1.00 36.27 ATOM 99 N ARG n 12 248.352 263.336 293.504 1.00 38.46 ATOM 100 CA ARG n 12 248.562 263.430 292.066 1.00 38.46 ATOM 101 C ARG n 12 250.018 263.680 291.703 1.00 38.46 ATOM 102 O ARG n 12 250.395 263.485 290.542 1.00 38.46 ATOM 103 CB ARG n 12 247.685 264.537 291.476 1.00 38.46 ATOM 104 CG ARG n 12 246.195 264.291 291.635 1.00 38.46 ATOM 105 CD ARG n 12 245.374 265.380 290.966 1.00 38.46 ATOM 106 NE ARG n 12 245.677 266.704 291.500 1.00 38.46 ATOM 107 CZ ARG n 12 245.022 267.811 291.167 1.00 38.46 ATOM 108 NH1 ARG n 12 244.020 267.755 290.300 1.00 38.46 ATOM 109 NH2 ARG n 12 245.367 268.974 291.701 1.00 38.46 ATOM 110 N LEU n 13 250.842 264.106 292.661 1.00 37.89 ATOM 111 CA LEU n 13 252.257 264.321 292.382 1.00 37.89 ATOM 112 C LEU n 13 253.036 263.013 292.442 1.00 37.89 ATOM 113 O LEU n 13 253.805 262.699 291.529 1.00 37.89 ATOM 114 CB LEU n 13 252.840 265.339 293.362 1.00 37.89 ATOM 115 CG LEU n 13 254.290 265.749 293.113 1.00 37.89 ATOM 116 CD1 LEU n 13 254.447 266.303 291.709 1.00 37.89 ATOM 117 CD2 LEU n 13 254.740 266.765 294.147 1.00 37.89 ATOM 118 N LYS n 14 252.849 262.237 293.510 1.00 36.73 ATOM 119 CA LYS n 14 253.522 260.950 293.624 1.00 36.73 ATOM 120 C LYS n 14 252.904 259.881 292.735 1.00 36.73 ATOM 121 O LYS n 14 253.489 258.803 292.594 1.00 36.73 ATOM 122 CB LYS n 14 253.520 260.475 295.078 1.00 36.73 ATOM 123 CG LYS n 14 252.151 260.120 295.625 1.00 36.73 ATOM 124 CD LYS n 14 252.238 259.732 297.091 1.00 36.73 ATOM 125 CE LYS n 14 250.863 259.450 297.670 1.00 36.73 ATOM 126 NZ LYS n 14 250.931 259.109 299.116 1.00 36.73 ATOM 127 N ARG n 15 251.744 260.150 292.136 1.00 37.57 ATOM 128 CA ARG n 15 251.157 259.203 291.196 1.00 37.57 ATOM 129 C ARG n 15 251.864 259.254 289.849 1.00 37.57 ATOM 130 O ARG n 15 252.091 258.212 289.225 1.00 37.57 ATOM 131 CB ARG n 15 249.665 259.484 291.031 1.00 37.57 ATOM 132 CG ARG n 15 248.928 258.480 290.170 1.00 37.57 ATOM 133 CD ARG n 15 247.450 258.817 290.095 1.00 37.57 ATOM 134 NE ARG n 15 246.717 257.888 289.241 1.00 37.57 ATOM 135 CZ ARG n 15 245.416 257.977 288.988 1.00 37.57 ATOM 136 NH1 ARG n 15 244.700 258.956 289.526 1.00 37.57 ATOM 137 NH2 ARG n 15 244.829 257.089 288.199 1.00 37.57 ATOM 138 N LYS n 16 252.223 260.453 289.386 1.00 38.30 ATOM 139 CA LYS n 16 253.001 260.575 288.161 1.00 38.30 ATOM 140 C LYS n 16 254.477 260.284 288.383 1.00 38.30 ATOM 141 O LYS n 16 255.186 259.977 287.418 1.00 38.30 ATOM 142 CB LYS n 16 252.835 261.971 287.557 1.00 38.30 ATOM 143 CG LYS n 16 253.479 263.085 288.361 1.00 38.30 ATOM 144 CD LYS n 16 253.407 264.411 287.621 1.00 38.30 ATOM 145 CE LYS n 16 251.969 264.808 287.334 1.00 38.30 ATOM 146 NZ LYS n 16 251.177 264.968 288.584 1.00 38.30 ATOM 147 N ARG n 17 254.957 260.377 289.626 1.00 36.85 ATOM 148 CA ARG n 17 256.321 259.954 289.921 1.00 36.85 ATOM 149 C ARG n 17 256.485 258.458 289.699 1.00 36.85 ATOM 150 O ARG n 17 257.530 258.004 289.221 1.00 36.85 ATOM 151 CB ARG n 17 256.692 260.326 291.356 1.00 36.85 ATOM 152 CG ARG n 17 256.889 261.811 291.585 1.00 36.85 ATOM 153 CD ARG n 17 257.196 262.105 293.041 1.00 36.85 ATOM 154 NE ARG n 17 257.441 263.525 293.267 1.00 36.85 ATOM 155 CZ ARG n 17 257.621 264.070 294.465 1.00 36.85 ATOM 156 NH1 ARG n 17 257.581 263.315 295.552 1.00 36.85 ATOM 157 NH2 ARG n 17 257.838 265.373 294.576 1.00 36.85 ATOM 158 N ARG n 18 255.460 257.676 290.042 1.00 37.87 ATOM 159 CA ARG n 18 255.509 256.242 289.780 1.00 37.87 ATOM 160 C ARG n 18 255.432 255.944 288.290 1.00 37.87 ATOM 161 O ARG n 18 255.999 254.947 287.831 1.00 37.87 ATOM 162 CB ARG n 18 254.379 255.532 290.524 1.00 37.87 ATOM 163 CG ARG n 18 254.483 255.628 292.035 1.00 37.87 ATOM 164 CD ARG n 18 253.330 254.915 292.720 1.00 37.87 ATOM 165 NE ARG n 18 252.041 255.521 292.399 1.00 37.87 ATOM 166 CZ ARG n 18 250.886 255.147 292.939 1.00 37.87 ATOM 167 NH1 ARG n 18 250.857 254.166 293.831 1.00 37.87 ATOM 168 NH2 ARG n 18 249.761 255.753 292.589 1.00 37.87 ATOM 169 N LYS n 19 254.744 256.790 287.521 1.00 38.04 ATOM 170 CA LYS n 19 254.667 256.586 286.078 1.00 38.04 ATOM 171 C LYS n 19 256.031 256.766 285.426 1.00 38.04 ATOM 172 O LYS n 19 256.463 255.928 284.625 1.00 38.04 ATOM 173 CB LYS n 19 253.646 257.545 285.463 1.00 38.04 ATOM 174 CG LYS n 19 252.270 256.940 285.229 1.00 38.04 ATOM 175 CD LYS n 19 251.623 256.483 286.525 1.00 38.04 ATOM 176 CE LYS n 19 250.205 255.992 286.286 1.00 38.04 ATOM 177 NZ LYS n 19 250.162 254.880 285.296 1.00 38.04 ATOM 178 N MET n 20 256.728 257.855 285.755 1.00 39.82 ATOM 179 CA MET n 20 258.052 258.091 285.193 1.00 39.82 ATOM 180 C MET n 20 259.115 257.190 285.802 1.00 39.82 ATOM 181 O MET n 20 260.234 257.142 285.281 1.00 39.82 ATOM 182 CB MET n 20 258.449 259.557 285.371 1.00 39.82 ATOM 183 CG MET n 20 258.659 259.979 286.814 1.00 39.82 ATOM 184 SD MET n 20 259.163 261.705 286.955 1.00 39.82 ATOM 185 CE MET n 20 259.415 261.846 288.722 1.00 39.82 ATOM 186 N ARG n 21 258.799 256.484 286.886 1.00 37.17 ATOM 187 CA ARG n 21 259.705 255.510 287.478 1.00 37.17 ATOM 188 C ARG n 21 259.428 254.088 287.015 1.00 37.17 ATOM 189 O ARG n 21 260.365 253.294 286.889 1.00 37.17 ATOM 190 CB ARG n 21 259.622 255.575 289.007 1.00 37.17 ATOM 191 CG ARG n 21 260.604 254.678 289.738 1.00 37.17 ATOM 192 CD ARG n 21 260.489 254.862 291.240 1.00 37.17 ATOM 193 NE ARG n 21 261.228 253.843 291.978 1.00 37.17 ATOM 194 CZ ARG n 21 262.498 253.961 292.346 1.00 37.17 ATOM 195 NH1 ARG n 21 263.090 252.983 293.015 1.00 37.17 ATOM 196 NH2 ARG n 21 263.178 255.058 292.044 1.00 37.17 ATOM 197 N GLN n 22 258.164 253.752 286.749 1.00 38.06 ATOM 198 CA GLN n 22 257.830 252.429 286.235 1.00 38.06 ATOM 199 C GLN n 22 258.160 252.296 284.754 1.00 38.06 ATOM 200 O GLN n 22 258.384 251.181 284.270 1.00 38.06 ATOM 201 CB GLN n 22 256.347 252.133 286.471 1.00 38.06 ATOM 202 CG GLN n 22 255.920 250.715 286.134 1.00 38.06 ATOM 203 CD GLN n 22 256.516 249.684 287.072 1.00 38.06 ATOM 204 OE1 GLN n 22 256.887 249.996 288.204 1.00 38.06 ATOM 205 NE2 GLN n 22 256.613 248.445 286.604 1.00 38.06 ATOM 206 N ARG n 23 258.198 253.410 284.023 1.00 37.42 ATOM 207 CA ARG n 23 258.520 253.359 282.604 1.00 37.42 ATOM 208 C ARG n 23 260.008 253.170 282.348 1.00 37.42 ATOM 209 O ARG n 23 260.388 252.799 281.233 1.00 37.42 ATOM 210 CB ARG n 23 258.038 254.631 281.904 1.00 37.42 ATOM 211 CG ARG n 23 258.848 255.871 282.229 1.00 37.42 ATOM 212 CD ARG n 23 258.396 257.048 281.383 1.00 37.42 ATOM 213 NE ARG n 23 258.417 256.728 279.959 1.00 37.42 ATOM 214 CZ ARG n 23 258.071 257.576 278.997 1.00 37.42 ATOM 215 NH1 ARG n 23 258.121 257.197 277.728 1.00 37.42 ATOM 216 NH2 ARG n 23 257.675 258.803 279.303 1.00 37.42 ATOM 217 N SER n 24 260.855 253.413 283.350 1.00 38.88 ATOM 218 CA SER n 24 262.297 253.243 283.221 1.00 38.88 ATOM 219 C SER n 24 262.774 251.887 283.725 1.00 38.88 ATOM 220 O SER n 24 263.927 251.761 284.158 1.00 38.88 ATOM 221 CB SER n 24 263.026 254.369 283.955 1.00 38.88 ATOM 222 OG SER n 24 262.749 254.333 285.343 1.00 38.88 ATOM 223 N LYS n 25 261.919 250.872 283.683 1.00 37.69 ATOM 224 CA LYS n 25 262.283 249.542 284.154 1.00 37.69 ATOM 225 C LYS n 25 261.500 248.464 283.413 1.00 37.69 ATOM 226 O LYS n 25 261.255 248.577 282.212 1.00 37.69 ATOM 227 CB LYS n 25 262.044 249.424 285.661 1.00 37.69 ATOM 228 CG LYS n 25 260.612 249.703 286.080 1.00 37.69 ATOM 229 CD LYS n 25 260.443 249.609 287.586 1.00 37.69 ATOM 230 CE LYS n 25 260.722 248.204 288.086 1.00 37.69 ATOM 231 NZ LYS n 25 260.531 248.090 289.558 1.00 37.69 TER