HEADER TRANSCRIPTION 31-DEC-69 7XL4 TITLE Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme TITLE 2 complexes with transcription factor SutA (closed lobe) COMPND MOL_ID: 3; COMPND 2 MOLECULE: DNA-directed RNA polymerase subunit beta'; COMPND 3 CHAIN: D; COMPND 4 EC: 2.7.7.6; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 7XL4 D 2 1399 UNP Q9HWC9 RPOC_PSEAE 2 1399 SEQRES 1 D 172 ILE GLY VAL ASN ASP PHE VAL ILE PRO ASP GLU LYS ALA SEQRES 2 D 172 ARG ILE ILE ASN ALA ALA THR ASP GLU VAL LYS GLU ILE SEQRES 3 D 172 GLU SER GLN TYR ALA SER GLY LEU VAL THR GLN GLY GLU SEQRES 4 D 172 LYS TYR ASN LYS VAL ILE ASP LEU TRP SER LYS ALA ASN SEQRES 5 D 172 ASP GLU VAL SER LYS ALA MET MET ALA ASN LEU SER LYS SEQRES 6 D 172 GLU LYS VAL VAL ASP ARG GLU GLY LYS GLU VAL ASP GLN SEQRES 7 D 172 GLU SER PHE ASN SER MET TYR MET MET ALA ASP SER GLY SEQRES 8 D 172 ALA ARG GLY SER ALA ALA GLN ILE ARG GLN LEU ALA GLY SEQRES 9 D 172 MET ARG GLY LEU MET ALA LYS PRO ASP GLY SER ILE ILE SEQRES 10 D 172 GLU THR PRO ILE THR ALA ASN PHE ARG GLU GLY LEU ASN SEQRES 11 D 172 VAL LEU GLN TYR PHE ILE SER THR HIS GLY ALA ARG LYS SEQRES 12 D 172 GLY LEU ALA ASP THR ALA LEU LYS THR ALA ASN SER GLY SEQRES 13 D 172 TYR LEU THR ARG ARG LEU VAL ASP VAL ALA GLN ASP LEU SEQRES 14 D 172 VAL VAL THR ATOM 1 N CYS D 896 155.624 140.803 178.315 1.00 19.18 ATOM 2 CA CYS D 896 155.590 139.720 179.286 1.00 19.18 ATOM 3 C CYS D 896 154.305 138.911 179.158 1.00 19.18 ATOM 4 O CYS D 896 153.258 139.420 178.749 1.00 19.18 ATOM 5 CB CYS D 896 155.719 140.272 180.705 1.00 19.18 ATOM 6 SG CYS D 896 157.314 141.042 181.057 1.00 19.18 ATOM 7 N ALA D 897 154.397 137.628 179.515 1.00 16.99 ATOM 8 CA ALA D 897 153.231 136.755 179.444 1.00 16.99 ATOM 9 C ALA D 897 152.228 137.063 180.547 1.00 16.99 ATOM 10 O ALA D 897 151.021 136.888 180.352 1.00 16.99 ATOM 11 CB ALA D 897 153.665 135.291 179.515 1.00 16.99 ATOM 12 N MET D 898 152.703 137.520 181.708 1.00 18.51 ATOM 13 CA MET D 898 151.790 137.854 182.795 1.00 18.51 ATOM 14 C MET D 898 151.056 139.161 182.529 1.00 18.51 ATOM 15 O MET D 898 149.886 139.301 182.904 1.00 18.51 ATOM 16 CB MET D 898 152.553 137.931 184.118 1.00 18.51 ATOM 17 CG MET D 898 151.664 138.078 185.342 1.00 18.51 ATOM 18 N CYS D 899 151.717 140.124 181.882 1.00 17.60 ATOM 19 CA CYS D 899 151.070 141.392 181.569 1.00 17.60 ATOM 20 C CYS D 899 150.007 141.248 180.488 1.00 17.60 ATOM 21 O CYS D 899 149.086 142.068 180.430 1.00 17.60 ATOM 22 CB CYS D 899 152.114 142.423 181.137 1.00 17.60 ATOM 23 SG CYS D 899 153.359 142.795 182.392 1.00 17.60 ATOM 24 N TYR D 900 150.114 140.234 179.636 1.00 13.07 ATOM 25 CA TYR D 900 149.118 140.007 178.601 1.00 13.07 ATOM 26 C TYR D 900 147.930 139.238 179.166 1.00 13.07 ATOM 27 O TYR D 900 148.045 138.512 180.158 1.00 13.07 ATOM 28 CB TYR D 900 149.729 139.242 177.427 1.00 13.07 ATOM 29 CG TYR D 900 148.969 139.392 176.128 1.00 13.07 ATOM 30 CD1 TYR D 900 149.197 140.474 175.288 1.00 13.07 ATOM 31 CD2 TYR D 900 148.028 138.448 175.738 1.00 13.07 ATOM 32 CE1 TYR D 900 148.506 140.614 174.099 1.00 13.07 ATOM 33 CE2 TYR D 900 147.333 138.579 174.551 1.00 13.07 ATOM 34 CZ TYR D 900 147.576 139.663 173.736 1.00 13.07 ATOM 35 OH TYR D 900 146.885 139.797 172.553 1.00 13.07 ATOM 36 N GLY D 901 146.780 139.405 178.522 1.00 19.95 ATOM 37 CA GLY D 901 145.571 138.742 178.952 1.00 19.95 ATOM 38 C GLY D 901 145.586 137.256 178.632 1.00 19.95 ATOM 39 O GLY D 901 146.620 136.638 178.378 1.00 19.95 ATOM 40 N ARG D 902 144.386 136.674 178.654 1.00 22.50 ATOM 41 CA ARG D 902 144.201 135.258 178.363 1.00 22.50 ATOM 42 C ARG D 902 143.167 135.014 177.271 1.00 22.50 ATOM 43 O ARG D 902 142.758 133.865 177.066 1.00 22.50 ATOM 44 CB ARG D 902 143.804 134.502 179.635 1.00 22.50 ATOM 45 N ASP D 903 142.734 136.057 176.566 1.00 23.24 ATOM 46 CA ASP D 903 141.727 135.921 175.516 1.00 23.24 ATOM 47 C ASP D 903 142.400 135.375 174.264 1.00 23.24 ATOM 48 O ASP D 903 143.007 136.120 173.492 1.00 23.24 ATOM 49 CB ASP D 903 141.052 137.260 175.243 1.00 23.24 ATOM 50 N LEU D 904 142.289 134.065 174.058 1.00 20.23 ATOM 51 CA LEU D 904 142.876 133.401 172.902 1.00 20.23 ATOM 52 C LEU D 904 141.898 132.338 172.416 1.00 20.23 ATOM 53 O LEU D 904 140.742 132.284 172.845 1.00 20.23 ATOM 54 CB LEU D 904 144.244 132.801 173.252 1.00 20.23 ATOM 55 CG LEU D 904 145.420 133.764 173.407 1.00 20.23 ATOM 56 CD1 LEU D 904 146.684 132.994 173.748 1.00 20.23 ATOM 57 CD2 LEU D 904 145.613 134.580 172.141 1.00 20.23 ATOM 58 N ALA D 905 142.371 131.481 171.508 1.00 22.01 ATOM 59 CA ALA D 905 141.550 130.367 171.052 1.00 22.01 ATOM 60 C ALA D 905 141.384 129.316 172.140 1.00 22.01 ATOM 61 O ALA D 905 140.385 128.588 172.151 1.00 22.01 ATOM 62 CB ALA D 905 142.157 129.743 169.796 1.00 22.01 ATOM 63 N ARG D 906 142.344 129.222 173.057 1.00 25.15 ATOM 64 CA ARG D 906 142.262 128.298 174.174 1.00 25.15 ATOM 65 C ARG D 906 141.660 129.001 175.390 1.00 25.15 ATOM 66 O ARG D 906 141.260 130.166 175.334 1.00 25.15 ATOM 67 CB ARG D 906 143.642 127.724 174.492 1.00 25.15 ATOM 68 N GLY D 907 141.596 128.282 176.507 1.00 28.03 ATOM 69 CA GLY D 907 141.031 128.831 177.723 1.00 28.03 ATOM 70 C GLY D 907 142.068 129.150 178.780 1.00 28.03 ATOM 71 O GLY D 907 141.776 129.853 179.752 1.00 28.03 ATOM 72 N HIS D 908 143.283 128.641 178.601 1.00 26.82 ATOM 73 CA HIS D 908 144.353 128.843 179.564 1.00 26.82 ATOM 74 C HIS D 908 145.073 130.159 179.270 1.00 26.82 ATOM 75 O HIS D 908 144.640 130.962 178.440 1.00 26.82 ATOM 76 CB HIS D 908 145.308 127.651 179.547 1.00 26.82 ATOM 77 CG HIS D 908 145.914 127.381 178.206 1.00 26.82 ATOM 78 ND1 HIS D 908 146.930 128.149 177.678 1.00 26.82 ATOM 79 CD2 HIS D 908 145.648 126.425 177.284 1.00 26.82 ATOM 80 CE1 HIS D 908 147.263 127.679 176.490 1.00 26.82 ATOM 81 NE2 HIS D 908 146.501 126.633 176.226 1.00 26.82 ATOM 82 N ARG D 909 146.190 130.390 179.955 1.00 24.06 ATOM 83 CA ARG D 909 146.965 131.607 179.778 1.00 24.06 ATOM 84 C ARG D 909 147.776 131.530 178.485 1.00 24.06 ATOM 85 O ARG D 909 147.794 130.513 177.786 1.00 24.06 ATOM 86 CB ARG D 909 147.869 131.835 180.988 1.00 24.06 ATOM 87 CG ARG D 909 148.123 133.297 181.318 1.00 24.06 ATOM 88 CD ARG D 909 148.836 133.438 182.652 1.00 24.06 ATOM 89 NE ARG D 909 150.074 132.667 182.691 1.00 24.06 ATOM 90 CZ ARG D 909 150.834 132.529 183.772 1.00 24.06 ATOM 91 NH1 ARG D 909 151.945 131.807 183.716 1.00 24.06 ATOM 92 NH2 ARG D 909 150.484 133.112 184.910 1.00 24.06 ATOM 93 N VAL D 910 148.460 132.627 178.160 1.00 22.43 ATOM 94 CA VAL D 910 149.280 132.699 176.956 1.00 22.43 ATOM 95 C VAL D 910 150.518 131.831 177.131 1.00 22.43 ATOM 96 O VAL D 910 150.852 131.422 178.249 1.00 22.43 ATOM 97 CB VAL D 910 149.670 134.152 176.632 1.00 22.43 ATOM 98 CG1 VAL D 910 148.440 134.961 176.265 1.00 22.43 ATOM 99 CG2 VAL D 910 150.395 134.780 177.810 1.00 22.43 ATOM 100 N ASN D 911 151.204 131.548 176.031 1.00 26.03 ATOM 101 CA ASN D 911 152.412 130.738 176.035 1.00 26.03 ATOM 102 C ASN D 911 153.633 131.620 175.810 1.00 26.03 ATOM 103 O ASN D 911 153.529 132.788 175.425 1.00 26.03 ATOM 104 CB ASN D 911 152.333 129.644 174.964 1.00 26.03 ATOM 105 CG ASN D 911 150.982 128.958 174.931 1.00 26.03 ATOM 106 OD1 ASN D 911 150.329 128.896 173.890 1.00 26.03 ATOM 107 ND2 ASN D 911 150.555 128.439 176.076 1.00 26.03 ATOM 108 N ILE D 912 154.806 131.042 176.057 1.00 24.20 ATOM 109 CA ILE D 912 156.073 131.748 175.901 1.00 24.20 ATOM 110 C ILE D 912 156.549 131.512 174.471 1.00 24.20 ATOM 111 O ILE D 912 157.124 130.469 174.156 1.00 24.20 ATOM 112 CB ILE D 912 157.109 131.289 176.928 1.00 24.20 ATOM 113 CG1 ILE D 912 156.567 131.468 178.347 1.00 24.20 ATOM 114 CG2 ILE D 912 158.408 132.060 176.753 1.00 24.20 ATOM 115 CD1 ILE D 912 157.534 131.039 179.428 1.00 24.20 ATOM 116 N GLY D 913 156.304 132.487 173.600 1.00 21.52 ATOM 117 CA GLY D 913 156.731 132.386 172.219 1.00 21.52 ATOM 118 C GLY D 913 155.631 132.673 171.218 1.00 21.52 ATOM 119 O GLY D 913 155.871 132.673 170.007 1.00 21.52 ATOM 120 N GLU D 914 154.419 132.922 171.708 1.00 19.35 ATOM 121 CA GLU D 914 153.292 133.207 170.832 1.00 19.35 ATOM 122 C GLU D 914 153.357 134.651 170.350 1.00 19.35 ATOM 123 O GLU D 914 153.527 135.575 171.151 1.00 19.35 ATOM 124 CB GLU D 914 151.972 132.947 171.556 1.00 19.35 ATOM 125 CG GLU D 914 150.740 133.192 170.701 1.00 19.35 ATOM 126 CD GLU D 914 149.466 132.714 171.366 1.00 19.35 ATOM 127 OE1 GLU D 914 149.558 132.025 172.403 1.00 19.35 ATOM 128 OE2 GLU D 914 148.371 133.026 170.851 1.00 19.35 ATOM 129 N ALA D 915 153.220 134.841 169.040 1.00 14.77 ATOM 130 CA ALA D 915 153.280 136.169 168.432 1.00 14.77 ATOM 131 C ALA D 915 151.956 136.878 168.681 1.00 14.77 ATOM 132 O ALA D 915 150.999 136.749 167.916 1.00 14.77 ATOM 133 CB ALA D 915 153.588 136.068 166.943 1.00 14.77 ATOM 134 N VAL D 916 151.900 137.644 169.775 1.00 10.72 ATOM 135 CA VAL D 916 150.691 138.397 170.103 1.00 10.72 ATOM 136 C VAL D 916 150.604 139.722 169.368 1.00 10.72 ATOM 137 O VAL D 916 149.572 140.399 169.454 1.00 10.72 ATOM 138 CB VAL D 916 150.595 138.658 171.618 1.00 10.72 ATOM 139 CG1 VAL D 916 150.660 137.347 172.385 1.00 10.72 ATOM 140 CG2 VAL D 916 151.702 139.599 172.063 1.00 10.72 ATOM 141 N GLY D 917 151.657 140.116 168.648 1.00 11.85 ATOM 142 CA GLY D 917 151.608 141.357 167.897 1.00 11.85 ATOM 143 C GLY D 917 150.906 141.232 166.563 1.00 11.85 ATOM 144 O GLY D 917 150.343 142.211 166.064 1.00 11.85 ATOM 145 N VAL D 918 150.925 140.042 165.968 1.00 9.69 ATOM 146 CA VAL D 918 150.260 139.820 164.689 1.00 9.69 ATOM 147 C VAL D 918 148.787 139.480 164.881 1.00 9.69 ATOM 148 O VAL D 918 147.937 139.923 164.105 1.00 9.69 ATOM 149 CB VAL D 918 150.995 138.719 163.899 1.00 9.69 ATOM 150 CG1 VAL D 918 150.422 138.597 162.496 1.00 9.69 ATOM 151 CG2 VAL D 918 152.486 139.010 163.849 1.00 9.69 ATOM 152 N ILE D 919 148.463 138.698 165.914 1.00 8.58 ATOM 153 CA ILE D 919 147.073 138.340 166.167 1.00 8.58 ATOM 154 C ILE D 919 146.267 139.530 166.669 1.00 8.58 ATOM 155 O ILE D 919 145.032 139.496 166.631 1.00 8.58 ATOM 156 CB ILE D 919 146.988 137.173 167.169 1.00 8.58 ATOM 157 CG1 ILE D 919 147.418 137.632 168.562 1.00 8.58 ATOM 158 CG2 ILE D 919 147.848 136.010 166.705 1.00 8.58 ATOM 159 CD1 ILE D 919 147.408 136.531 169.596 1.00 8.58 ATOM 160 N ALA D 920 146.933 140.584 167.140 1.00 10.22 ATOM 161 CA ALA D 920 146.240 141.783 167.589 1.00 10.22 ATOM 162 C ALA D 920 146.001 142.775 166.461 1.00 10.22 ATOM 163 O ALA D 920 145.043 143.555 166.524 1.00 10.22 ATOM 164 CB ALA D 920 147.030 142.464 168.710 1.00 10.22 ATOM 165 N ALA D 921 146.849 142.765 165.432 1.00 10.26 ATOM 166 CA ALA D 921 146.648 143.651 164.293 1.00 10.26 ATOM 167 C ALA D 921 145.625 143.094 163.312 1.00 10.26 ATOM 168 O ALA D 921 144.921 143.867 162.653 1.00 10.26 ATOM 169 CB ALA D 921 147.976 143.904 163.580 1.00 10.26 ATOM 170 N GLN D 922 145.528 141.767 163.201 1.00 10.23 ATOM 171 CA GLN D 922 144.533 141.173 162.316 1.00 10.23 ATOM 172 C GLN D 922 143.131 141.270 162.902 1.00 10.23 ATOM 173 O GLN D 922 142.151 141.332 162.152 1.00 10.23 ATOM 174 CB GLN D 922 144.884 139.713 162.031 1.00 10.23 ATOM 175 CG GLN D 922 146.126 139.526 161.178 1.00 10.23 ATOM 176 CD GLN D 922 146.457 138.065 160.953 1.00 10.23 ATOM 177 OE1 GLN D 922 146.036 137.196 161.717 1.00 10.23 ATOM 178 NE2 GLN D 922 147.213 137.786 159.899 1.00 10.23 ATOM 179 N SER D 923 143.014 141.285 164.231 1.00 8.94 ATOM 180 CA SER D 923 141.705 141.380 164.865 1.00 8.94 ATOM 181 C SER D 923 141.077 142.757 164.698 1.00 8.94 ATOM 182 O SER D 923 139.859 142.891 164.853 1.00 8.94 ATOM 183 CB SER D 923 141.815 141.037 166.351 1.00 8.94 ATOM 184 OG SER D 923 140.545 140.727 166.896 1.00 8.94 ATOM 185 N ILE D 924 141.874 143.776 164.388 1.00 10.79 ATOM 186 CA ILE D 924 141.345 145.121 164.190 1.00 10.79 ATOM 187 C ILE D 924 141.037 145.386 162.722 1.00 10.79 ATOM 188 O ILE D 924 140.014 145.993 162.396 1.00 10.79 ATOM 189 CB ILE D 924 142.332 146.161 164.757 1.00 10.79 ATOM 190 CG1 ILE D 924 142.626 145.868 166.229 1.00 10.79 ATOM 191 CG2 ILE D 924 141.781 147.568 164.594 1.00 10.79 ATOM 192 CD1 ILE D 924 143.598 146.839 166.862 1.00 10.79 ATOM 193 N GLY D 925 141.906 144.934 161.818 1.00 15.73 ATOM 194 CA GLY D 925 141.701 145.152 160.399 1.00 15.73 ATOM 195 C GLY D 925 140.731 144.204 159.731 1.00 15.73 ATOM 196 O GLY D 925 140.371 144.428 158.571 1.00 15.73 ATOM 197 N GLU D 926 140.299 143.150 160.430 1.00 17.09 ATOM 198 CA GLU D 926 139.347 142.219 159.826 1.00 17.09 ATOM 199 C GLU D 926 137.942 142.805 159.734 1.00 17.09 ATOM 200 O GLU D 926 137.355 142.766 158.638 1.00 17.09 ATOM 201 CB GLU D 926 139.367 140.886 160.582 1.00 17.09 ATOM 202 CG GLU D 926 138.407 139.844 160.032 1.00 17.09 ATOM 203 CD GLU D 926 137.115 139.768 160.820 1.00 17.09 ATOM 204 OE1 GLU D 926 137.107 140.200 161.992 1.00 17.09 ATOM 205 OE2 GLU D 926 136.108 139.277 160.269 1.00 17.09 ATOM 206 N PRO D 927 137.344 143.350 160.797 1.00 20.70 ATOM 207 CA PRO D 927 136.001 143.928 160.671 1.00 20.70 ATOM 208 C PRO D 927 135.962 145.315 160.048 1.00 20.70 ATOM 209 O PRO D 927 134.916 145.967 160.109 1.00 20.70 ATOM 210 CB PRO D 927 135.520 143.976 162.128 1.00 20.70 ATOM 211 CG PRO D 927 136.751 144.211 162.897 1.00 20.70 ATOM 212 CD PRO D 927 137.834 143.443 162.187 1.00 20.70 ATOM 213 N GLY D 928 137.064 145.784 159.458 1.00 28.25 ATOM 214 CA GLY D 928 137.073 147.095 158.834 1.00 28.25 ATOM 215 C GLY D 928 136.215 147.195 157.591 1.00 28.25 ATOM 216 O GLY D 928 135.778 148.295 157.239 1.00 28.25 ATOM 217 N THR D 929 135.963 146.071 156.918 1.00 27.74 ATOM 218 CA THR D 929 135.123 146.077 155.727 1.00 27.74 ATOM 219 C THR D 929 133.644 146.236 156.049 1.00 27.74 ATOM 220 O THR D 929 132.855 146.498 155.135 1.00 27.74 ATOM 221 CB THR D 929 135.335 144.791 154.925 1.00 27.74 ATOM 222 OG1 THR D 929 134.456 144.781 153.793 1.00 27.74 ATOM 223 CG2 THR D 929 135.054 143.571 155.790 1.00 27.74 ATOM 224 N GLN D 930 133.251 146.086 157.314 1.00 25.80 ATOM 225 CA GLN D 930 131.861 146.239 157.721 1.00 25.80 ATOM 226 C GLN D 930 131.539 147.636 158.235 1.00 25.80 ATOM 227 O GLN D 930 130.370 147.920 158.515 1.00 25.80 ATOM 228 CB GLN D 930 131.509 145.208 158.800 1.00 25.80 ATOM 229 CG GLN D 930 131.830 143.774 158.416 1.00 25.80 ATOM 230 CD GLN D 930 131.541 142.792 159.534 1.00 25.80 ATOM 231 OE1 GLN D 930 131.899 141.617 159.452 1.00 25.80 ATOM 232 NE2 GLN D 930 130.889 143.270 160.587 1.00 25.80 ATOM 233 N LEU D 931 132.537 148.507 158.365 1.00 25.61 ATOM 234 CA LEU D 931 132.313 149.860 158.847 1.00 25.61 ATOM 235 C LEU D 931 131.763 150.736 157.722 1.00 25.61 ATOM 236 O LEU D 931 131.647 150.318 156.567 1.00 25.61 ATOM 237 CB LEU D 931 133.606 150.440 159.415 1.00 25.61 ATOM 238 CG LEU D 931 134.287 149.633 160.522 1.00 25.61 ATOM 239 CD1 LEU D 931 135.551 150.333 160.995 1.00 25.61 ATOM 240 CD2 LEU D 931 133.333 149.400 161.682 1.00 25.61 ATOM 241 N THR D 932 131.421 151.973 158.066 1.00 23.80 ATOM 242 CA THR D 932 130.891 152.919 157.091 1.00 23.80 ATOM 243 C THR D 932 132.018 153.647 156.367 1.00 23.80 ATOM 244 O THR D 932 133.172 153.604 156.793 1.00 23.80 ATOM 245 CB THR D 932 129.965 153.956 157.754 1.00 23.80 ATOM 246 OG1 THR D 932 130.755 154.965 158.395 1.00 23.80 ATOM 247 CG2 THR D 932 129.071 153.287 158.786 1.00 23.80 TER