HEADER PHOTOSYNTHESIS 31-DEC-69 7Y7A TITLE In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium TITLE 2 purpureum. COMPND MOL_ID: 54; COMPND 2 MOLECULE: Photosystem II protein Y; COMPND 3 CHAIN: R9, r9, RE, rE, RO, rO, RZ, rZ, Rm, rm; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 7Y7A r 2 34 UNP W0S1X5 W0S1X5_PORP 2 34 MODRES 7Y7A MEN 72 ASN modified residue MODRES 7Y7A MEN 72 ASN modified residue MODRES 7Y7A MEN 72 ASN modified residue SEQRES 1 rZ 33 ASP THR ARG LEU LEU ILE VAL LEU LEU PRO VAL LEU ALA SEQRES 2 rZ 33 ALA ALA SER TRP ALA LEU TYR ASN ILE GLY ARG VAL ALA SEQRES 3 rZ 33 LEU GLN GLN PHE LYS ARG LEU ATOM 1 N ASP r 1 353.018 295.622 711.007 1.00112.42 ATOM 2 CA ASP r 1 352.211 294.620 711.692 1.00112.42 ATOM 3 C ASP r 1 352.428 293.237 711.094 1.00112.42 ATOM 4 O ASP r 1 353.135 293.081 710.101 1.00112.42 ATOM 5 CB ASP r 1 350.726 294.983 711.617 1.00112.42 ATOM 6 CG ASP r 1 350.368 296.180 712.479 1.00112.42 ATOM 7 OD1 ASP r 1 351.178 296.564 713.348 1.00112.42 ATOM 8 OD2 ASP r 1 349.274 296.744 712.277 1.00112.42 ATOM 9 N THR r 2 351.817 292.230 711.716 1.00104.84 ATOM 10 CA THR r 2 351.736 290.906 711.110 1.00104.84 ATOM 11 C THR r 2 350.432 290.724 710.354 1.00104.84 ATOM 12 O THR r 2 350.432 290.247 709.212 1.00104.84 ATOM 13 CB THR r 2 351.882 289.819 712.178 1.00104.84 ATOM 14 OG1 THR r 2 350.848 289.961 713.163 1.00104.84 ATOM 15 CG2 THR r 2 353.225 289.931 712.853 1.00104.84 ATOM 16 N ARG r 3 349.308 291.094 710.967 1.00 97.34 ATOM 17 CA ARG r 3 348.015 290.931 710.316 1.00 97.34 ATOM 18 C ARG r 3 347.846 291.862 709.126 1.00 97.34 ATOM 19 O ARG r 3 347.057 291.561 708.224 1.00 97.34 ATOM 20 CB ARG r 3 346.880 291.162 711.317 1.00 97.34 ATOM 21 CG ARG r 3 346.962 292.484 712.005 1.00 97.34 ATOM 22 CD ARG r 3 346.381 292.415 713.394 1.00 97.34 ATOM 23 NE ARG r 3 346.277 293.737 714.000 1.00 97.34 ATOM 24 CZ ARG r 3 345.833 293.954 715.232 1.00 97.34 ATOM 25 NH1 ARG r 3 345.456 292.937 715.991 1.00 97.34 ATOM 26 NH2 ARG r 3 345.765 295.188 715.702 1.00 97.34 ATOM 27 N LEU r 4 348.572 292.982 709.099 1.00 96.41 ATOM 28 CA LEU r 4 348.403 293.970 708.039 1.00 96.41 ATOM 29 C LEU r 4 348.789 293.403 706.680 1.00 96.41 ATOM 30 O LEU r 4 348.276 293.859 705.655 1.00 96.41 ATOM 31 CB LEU r 4 349.215 295.231 708.346 1.00 96.41 ATOM 32 CG LEU r 4 348.904 296.499 707.538 1.00 96.41 ATOM 33 CD1 LEU r 4 349.260 297.737 708.340 1.00 96.41 ATOM 34 CD2 LEU r 4 349.634 296.531 706.201 1.00 96.41 ATOM 35 N LEU r 5 349.692 292.423 706.650 1.00 97.28 ATOM 36 CA LEU r 5 349.930 291.672 705.427 1.00 97.28 ATOM 37 C LEU r 5 348.912 290.560 705.229 1.00 97.28 ATOM 38 O LEU r 5 348.731 290.093 704.099 1.00 97.28 ATOM 39 CB LEU r 5 351.349 291.090 705.422 1.00 97.28 ATOM 40 CG LEU r 5 351.703 290.005 706.443 1.00 97.28 ATOM 41 CD1 LEU r 5 351.463 288.607 705.889 1.00 97.28 ATOM 42 CD2 LEU r 5 353.145 290.154 706.894 1.00 97.28 ATOM 43 N ILE r 6 348.247 290.127 706.302 1.00 94.67 ATOM 44 CA ILE r 6 347.200 289.121 706.175 1.00 94.67 ATOM 45 C ILE r 6 345.992 289.683 705.442 1.00 94.67 ATOM 46 O ILE r 6 345.351 288.973 704.661 1.00 94.67 ATOM 47 CB ILE r 6 346.812 288.576 707.562 1.00 94.67 ATOM 48 CG1 ILE r 6 348.045 288.033 708.287 1.00 94.67 ATOM 49 CG2 ILE r 6 345.749 287.510 707.428 1.00 94.67 ATOM 50 CD1 ILE r 6 347.787 287.657 709.727 1.00 94.67 ATOM 51 N VAL r 7 345.663 290.959 705.666 1.00 90.85 ATOM 52 CA VAL r 7 344.495 291.543 705.013 1.00 90.85 ATOM 53 C VAL r 7 344.712 291.644 703.512 1.00 90.85 ATOM 54 O VAL r 7 343.819 291.329 702.718 1.00 90.85 ATOM 55 CB VAL r 7 344.169 292.921 705.608 1.00 90.85 ATOM 56 CG1 VAL r 7 343.044 293.551 704.841 1.00 90.85 ATOM 57 CG2 VAL r 7 343.837 292.803 707.088 1.00 90.85 ATOM 58 N LEU r 8 345.889 292.096 703.098 1.00 93.47 ATOM 59 CA LEU r 8 346.167 292.361 701.696 1.00 93.47 ATOM 60 C LEU r 8 346.914 291.231 701.006 1.00 93.47 ATOM 61 O LEU r 8 347.207 291.338 699.812 1.00 93.47 ATOM 62 CB LEU r 8 346.933 293.679 701.576 1.00 93.47 ATOM 63 CG LEU r 8 348.133 293.843 702.507 1.00 93.47 ATOM 64 CD1 LEU r 8 349.392 293.255 701.898 1.00 93.47 ATOM 65 CD2 LEU r 8 348.324 295.305 702.837 1.00 93.47 ATOM 66 N LEU r 9 347.219 290.148 701.717 1.00 91.50 ATOM 67 CA LEU r 9 347.746 288.970 701.037 1.00 91.50 ATOM 68 C LEU r 9 346.747 288.386 700.048 1.00 91.50 ATOM 69 O LEU r 9 347.163 288.050 698.925 1.00 91.50 ATOM 70 CB LEU r 9 348.189 287.919 702.063 1.00 91.50 ATOM 71 CG LEU r 9 349.153 286.843 701.543 1.00 91.50 ATOM 72 CD1 LEU r 9 350.007 286.310 702.676 1.00 91.50 ATOM 73 CD2 LEU r 9 348.410 285.698 700.867 1.00 91.50 ATOM 74 N PRO r 10 345.463 288.212 700.382 1.00 88.98 ATOM 75 CA PRO r 10 344.498 287.820 699.341 1.00 88.98 ATOM 76 C PRO r 10 344.381 288.834 698.219 1.00 88.98 ATOM 77 O PRO r 10 344.087 288.460 697.078 1.00 88.98 ATOM 78 CB PRO r 10 343.186 287.684 700.122 1.00 88.98 ATOM 79 CG PRO r 10 343.612 287.349 701.493 1.00 88.98 ATOM 80 CD PRO r 10 344.880 288.105 701.731 1.00 88.98 ATOM 81 N VAL r 11 344.597 290.117 698.514 1.00 89.74 ATOM 82 CA VAL r 11 344.576 291.123 697.460 1.00 89.74 ATOM 83 C VAL r 11 345.764 290.943 696.529 1.00 89.74 ATOM 84 O VAL r 11 345.670 291.197 695.323 1.00 89.74 ATOM 85 CB VAL r 11 344.558 292.534 698.069 1.00 89.74 ATOM 86 CG1 VAL r 11 344.394 293.569 696.977 1.00 89.74 ATOM 87 CG2 VAL r 11 343.451 292.657 699.091 1.00 89.74 ATOM 88 N LEU r 12 346.899 290.504 697.072 1.00 88.98 ATOM 89 CA LEU r 12 348.105 290.391 696.264 1.00 88.98 ATOM 90 C LEU r 12 348.037 289.173 695.354 1.00 88.98 ATOM 91 O LEU r 12 348.397 289.248 694.174 1.00 88.98 ATOM 92 CB LEU r 12 349.329 290.322 697.174 1.00 88.98 ATOM 93 CG LEU r 12 350.684 290.392 696.470 1.00 88.98 ATOM 94 CD1 LEU r 12 351.692 291.105 697.356 1.00 88.98 ATOM 95 CD2 LEU r 12 351.185 289.015 696.103 1.00 88.98 ATOM 96 N ALA r 13 347.560 288.044 695.882 1.00 87.63 ATOM 97 CA ALA r 13 347.392 286.856 695.054 1.00 87.63 ATOM 98 C ALA r 13 346.320 287.074 693.996 1.00 87.63 ATOM 99 O ALA r 13 346.371 286.470 692.920 1.00 87.63 ATOM 100 CB ALA r 13 347.050 285.651 695.927 1.00 87.63 ATOM 101 N ALA r 14 345.338 287.932 694.282 1.00 86.06 ATOM 102 CA ALA r 14 344.380 288.315 693.252 1.00 86.06 ATOM 103 C ALA r 14 345.060 289.116 692.151 1.00 86.06 ATOM 104 O ALA r 14 344.831 288.868 690.962 1.00 86.06 ATOM 105 CB ALA r 14 343.237 289.118 693.867 1.00 86.06 ATOM 106 N ALA r 15 345.887 290.090 692.532 1.00 88.43 ATOM 107 CA ALA r 15 346.685 290.809 691.545 1.00 88.43 ATOM 108 C ALA r 15 347.634 289.866 690.824 1.00 88.43 ATOM 109 O ALA r 15 347.859 290.001 689.616 1.00 88.43 ATOM 110 CB ALA r 15 347.461 291.941 692.216 1.00 88.43 ATOM 111 N SER r 16 348.194 288.897 691.548 1.00 86.49 ATOM 112 CA SER r 16 349.091 287.934 690.918 1.00 86.49 ATOM 113 C SER r 16 348.345 287.032 689.949 1.00 86.49 ATOM 114 O SER r 16 348.903 286.619 688.926 1.00 86.49 ATOM 115 CB SER r 16 349.804 287.102 691.979 1.00 86.49 ATOM 116 OG SER r 16 348.876 286.319 692.709 1.00 86.49 ATOM 117 N TRP r 17 347.096 286.695 690.256 1.00 85.71 ATOM 118 CA TRP r 17 346.330 285.851 689.349 1.00 85.71 ATOM 119 C TRP r 17 345.901 286.633 688.118 1.00 85.71 ATOM 120 O TRP r 17 345.940 286.119 686.995 1.00 85.71 ATOM 121 CB TRP r 17 345.111 285.269 690.057 1.00 85.71 ATOM 122 CG TRP r 17 344.195 284.550 689.126 1.00 85.71 ATOM 123 CD1 TRP r 17 342.928 284.906 688.797 1.00 85.71 ATOM 124 CD2 TRP r 17 344.479 283.353 688.389 1.00 85.71 ATOM 125 NE1 TRP r 17 342.397 284.008 687.908 1.00 85.71 ATOM 126 CE2 TRP r 17 343.331 283.044 687.640 1.00 85.71 ATOM 127 CE3 TRP r 17 345.591 282.513 688.293 1.00 85.71 ATOM 128 CZ2 TRP r 17 343.260 281.931 686.807 1.00 85.71 ATOM 129 CZ3 TRP r 17 345.519 281.408 687.465 1.00 85.71 ATOM 130 CH2 TRP r 17 344.363 281.127 686.734 1.00 85.71 ATOM 131 N ALA r 18 345.482 287.883 688.311 1.00 85.63 ATOM 132 CA ALA r 18 345.090 288.699 687.171 1.00 85.63 ATOM 133 C ALA r 18 346.293 289.052 686.314 1.00 85.63 ATOM 134 O ALA r 18 346.204 289.052 685.081 1.00 85.63 ATOM 135 CB ALA r 18 344.376 289.960 687.648 1.00 85.63 ATOM 136 N LEU r 19 347.436 289.329 686.944 1.00 87.60 ATOM 137 CA LEU r 19 348.632 289.674 686.185 1.00 87.60 ATOM 138 C LEU r 19 349.118 288.498 685.351 1.00 87.60 ATOM 139 O LEU r 19 349.752 288.689 684.307 1.00 87.60 ATOM 140 CB LEU r 19 349.735 290.151 687.126 1.00 87.60 ATOM 141 CG LEU r 19 351.026 290.553 686.416 1.00 87.60 ATOM 142 CD1 LEU r 19 350.777 291.736 685.492 1.00 87.60 ATOM 143 CD2 LEU r 19 352.125 290.865 687.417 1.00 87.60 ATOM 144 N TYR r 20 348.826 287.276 685.795 1.00 86.94 ATOM 145 CA TYR r 20 349.233 286.097 685.042 1.00 86.94 ATOM 146 C TYR r 20 348.528 286.031 683.692 1.00 86.94 ATOM 147 O TYR r 20 349.090 285.523 682.715 1.00 86.94 ATOM 148 CB TYR r 20 348.955 284.841 685.864 1.00 86.94 ATOM 149 CG TYR r 20 348.892 283.577 685.047 1.00 86.94 ATOM 150 CD1 TYR r 20 350.035 283.047 684.473 1.00 86.94 ATOM 151 CD2 TYR r 20 347.692 282.917 684.848 1.00 86.94 ATOM 152 CE1 TYR r 20 349.984 281.894 683.723 1.00 86.94 ATOM 153 CE2 TYR r 20 347.631 281.761 684.099 1.00 86.94 ATOM 154 CZ TYR r 20 348.780 281.255 683.539 1.00 86.94 ATOM 155 OH TYR r 20 348.725 280.103 682.792 1.00 86.94 ATOM 156 N ASN r 21 347.307 286.558 683.610 1.00 86.86 ATOM 157 CA ASN r 21 346.543 286.497 682.370 1.00 86.86 ATOM 158 C ASN r 21 346.533 287.807 681.594 1.00 86.86 ATOM 159 O ASN r 21 345.833 287.892 680.580 1.00 86.86 ATOM 160 CB ASN r 21 345.102 286.084 682.665 1.00 86.86 ATOM 161 CG ASN r 21 345.020 284.829 683.495 1.00 86.86 ATOM 162 OD1 ASN r 21 344.744 284.879 684.692 1.00 86.86 ATOM 163 ND2 ASN r 21 345.253 283.688 682.863 1.00 86.86 ATOM 164 N ILE r 22 347.284 288.816 682.027 1.00 91.12 ATOM 165 CA ILE r 22 347.194 290.144 681.426 1.00 91.12 ATOM 166 C ILE r 22 348.565 290.621 680.966 1.00 91.12 ATOM 167 O ILE r 22 348.666 291.518 680.121 1.00 91.12 ATOM 168 CB ILE r 22 346.562 291.138 682.416 1.00 91.12 ATOM 169 CG1 ILE r 22 345.165 290.672 682.786 1.00 91.12 ATOM 170 CG2 ILE r 22 346.457 292.525 681.817 1.00 91.12 ATOM 171 CD1 ILE r 22 344.343 290.298 681.593 1.00 91.12 ATOM 172 N GLY r 23 349.623 290.011 681.505 1.00 96.83 ATOM 173 CA GLY r 23 350.971 290.466 681.205 1.00 96.83 ATOM 174 C GLY r 23 351.331 290.380 679.736 1.00 96.83 ATOM 175 O GLY r 23 352.001 291.269 679.205 1.00 96.83 ATOM 176 N ARG r 24 350.884 289.325 679.056 1.00103.58 ATOM 177 CA ARG r 24 351.144 289.209 677.627 1.00103.58 ATOM 178 C ARG r 24 350.373 290.266 676.846 1.00103.58 ATOM 179 O ARG r 24 350.869 290.803 675.849 1.00103.58 ATOM 180 CB ARG r 24 350.784 287.805 677.143 1.00103.58 ATOM 181 CG ARG r 24 351.558 286.692 677.831 1.00103.58 ATOM 182 CD ARG r 24 352.947 286.538 677.236 1.00103.58 ATOM 183 NE ARG r 24 353.569 285.274 677.617 1.00103.58 ATOM 184 CZ ARG r 24 354.340 285.115 678.688 1.00103.58 ATOM 185 NH1 ARG r 24 354.582 286.144 679.488 1.00103.58 ATOM 186 NH2 ARG r 24 354.867 283.930 678.962 1.00103.58 ATOM 187 N VAL r 25 349.154 290.581 677.287 1.00101.49 ATOM 188 CA VAL r 25 348.322 291.512 676.536 1.00101.49 ATOM 189 C VAL r 25 348.589 292.952 676.955 1.00101.49 ATOM 190 O VAL r 25 348.517 293.866 676.123 1.00101.49 ATOM 191 CB VAL r 25 346.837 291.140 676.689 1.00101.49 ATOM 192 CG1 VAL r 25 345.954 292.165 676.018 1.00101.49 ATOM 193 CG2 VAL r 25 346.582 289.765 676.100 1.00101.49 ATOM 194 N ALA r 26 348.894 293.193 678.232 1.00 98.71 ATOM 195 CA ALA r 26 349.155 294.561 678.667 1.00 98.71 ATOM 196 C ALA r 26 350.455 295.084 678.073 1.00 98.71 ATOM 197 O ALA r 26 350.573 296.279 677.781 1.00 98.71 ATOM 198 CB ALA r 26 349.187 294.636 680.190 1.00 98.71 ATOM 199 N LEU r 27 351.444 294.206 677.893 1.00101.54 ATOM 200 CA LEU r 27 352.666 294.607 677.207 1.00101.54 ATOM 201 C LEU r 27 352.376 295.005 675.768 1.00101.54 ATOM 202 O LEU r 27 353.001 295.926 675.233 1.00101.54 ATOM 203 CB LEU r 27 353.696 293.480 677.250 1.00101.54 ATOM 204 CG LEU r 27 354.288 293.033 678.592 1.00101.54 ATOM 205 CD1 LEU r 27 355.164 291.813 678.373 1.00101.54 ATOM 206 CD2 LEU r 27 355.080 294.129 679.285 1.00101.54 ATOM 207 N GLN r 28 351.422 294.325 675.126 1.00101.50 ATOM 208 CA GLN r 28 351.028 294.702 673.775 1.00101.50 ATOM 209 C GLN r 28 350.415 296.093 673.738 1.00101.50 ATOM 210 O GLN r 28 350.522 296.790 672.724 1.00101.50 ATOM 211 CB GLN r 28 350.048 293.679 673.208 1.00101.50 ATOM 212 CG GLN r 28 349.485 294.062 671.856 1.00101.50 ATOM 213 CD GLN r 28 348.623 292.974 671.252 1.00101.50 ATOM 214 OE1 GLN r 28 348.487 291.889 671.815 1.00101.50 ATOM 215 NE2 GLN r 28 348.031 293.260 670.100 1.00101.50 ATOM 216 N GLN r 29 349.777 296.516 674.829 1.00 98.93 ATOM 217 CA GLN r 29 349.194 297.853 674.865 1.00 98.93 ATOM 218 C GLN r 29 350.266 298.920 675.045 1.00 98.93 ATOM 219 O GLN r 29 350.232 299.958 674.376 1.00 98.93 ATOM 220 CB GLN r 29 348.156 297.941 675.978 1.00 98.93 ATOM 221 CG GLN r 29 347.568 299.321 676.166 1.00 98.93 ATOM 222 CD GLN r 29 346.751 299.427 677.434 1.00 98.93 ATOM 223 OE1 GLN r 29 345.614 298.962 677.494 1.00 98.93 ATOM 224 NE2 GLN r 29 347.330 300.038 678.459 1.00 98.93 ATOM 225 N PHE r 30 351.229 298.681 675.936 1.00104.64 ATOM 226 CA PHE r 30 352.253 299.688 676.192 1.00104.64 ATOM 227 C PHE r 30 353.228 299.797 675.027 1.00104.64 ATOM 228 O PHE r 30 353.630 300.903 674.650 1.00104.64 ATOM 229 CB PHE r 30 352.991 299.363 677.489 1.00104.64 ATOM 230 CG PHE r 30 352.118 299.424 678.705 1.00104.64 ATOM 231 CD1 PHE r 30 351.132 300.387 678.812 1.00104.64 ATOM 232 CD2 PHE r 30 352.275 298.517 679.735 1.00104.64 ATOM 233 CE1 PHE r 30 350.320 300.447 679.927 1.00104.64 ATOM 234 CE2 PHE r 30 351.468 298.571 680.852 1.00104.64 ATOM 235 CZ PHE r 30 350.490 299.536 680.949 1.00104.64 ATOM 236 N LYS r 31 353.616 298.666 674.441 1.00107.11 ATOM 237 CA LYS r 31 354.490 298.707 673.278 1.00107.11 ATOM 238 C LYS r 31 353.777 299.194 672.025 1.00107.11 ATOM 239 O LYS r 31 354.449 299.542 671.049 1.00107.11 ATOM 240 CB LYS r 31 355.097 297.326 673.028 1.00107.11 ATOM 241 CG LYS r 31 355.841 296.760 674.224 1.00107.11 ATOM 242 CD LYS r 31 357.018 295.903 673.793 1.00107.11 ATOM 243 CE LYS r 31 356.643 294.988 672.642 1.00107.11 ATOM 244 NZ LYS r 31 355.483 294.118 672.977 1.00107.11 ATOM 245 N ARG r 32 352.445 299.227 672.026 1.00105.67 ATOM 246 CA ARG r 32 351.696 299.783 670.907 1.00105.67 ATOM 247 C ARG r 32 351.717 301.306 670.891 1.00105.67 ATOM 248 O ARG r 32 351.372 301.904 669.867 1.00105.67 ATOM 249 CB ARG r 32 350.251 299.272 670.943 1.00105.67 ATOM 250 CG ARG r 32 349.400 299.646 669.735 1.00105.67 ATOM 251 CD ARG r 32 350.105 299.351 668.418 1.00105.67 ATOM 252 NE ARG r 32 350.380 297.929 668.226 1.00105.67 ATOM 253 CZ ARG r 32 349.483 297.043 667.801 1.00105.67 ATOM 254 NH1 ARG r 32 349.824 295.771 667.650 1.00105.67 ATOM 255 NH2 ARG r 32 348.242 297.427 667.535 1.00105.67 ATOM 256 N LEU r 33 352.122 301.940 671.985 1.00108.18 ATOM 257 CA LEU r 33 352.264 303.390 672.028 1.00108.18 ATOM 258 C LEU r 33 353.656 303.783 672.507 1.00108.18 ATOM 259 O LEU r 33 353.962 303.684 673.695 1.00108.18 ATOM 260 CB LEU r 33 351.205 304.012 672.937 1.00108.18 ATOM 261 CG LEU r 33 349.784 303.473 672.788 1.00108.18 ATOM 262 CD1 LEU r 33 348.882 304.061 673.859 1.00108.18 ATOM 263 CD2 LEU r 33 349.246 303.784 671.402 1.00108.18 TER