HEADER PHOTOSYNTHESIS 31-DEC-69 7Y7A TITLE In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium TITLE 2 purpureum. COMPND MOL_ID: 61; COMPND 2 MOLECULE: Photosystem II reaction center protein Ycf12; COMPND 3 CHAIN: Y9, y9, YE, yE, YO, yO, YZ, yZ, Ym, ym; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 7Y7A y 1 34 UNP W0RZ91 W0RZ91_PORP 1 34 MODRES 7Y7A MEN 72 ASN modified residue MODRES 7Y7A MEN 72 ASN modified residue SEQRES 1 ym 33 MET ILE ASN TRP GLN VAL ILE GLY GLN LEU VAL SER LEU SEQRES 2 ym 33 ALA ILE ILE VAL LEU VAL GLY PRO ALA VAL ILE PHE LEU SEQRES 3 ym 33 LEU ALA PHE LYS LYS GLY ASN ATOM 1 N MET y 1 609.971 473.472 715.662 1.00118.15 ATOM 2 CA MET y 1 609.016 474.562 715.803 1.00118.15 ATOM 3 C MET y 1 608.785 475.160 714.413 1.00118.15 ATOM 4 O MET y 1 609.500 476.065 713.959 1.00118.15 ATOM 5 CB MET y 1 609.534 475.593 716.812 1.00118.15 ATOM 6 CG MET y 1 609.627 475.129 718.261 1.00118.15 ATOM 7 SD MET y 1 610.165 476.451 719.372 1.00118.15 ATOM 8 CE MET y 1 611.927 476.557 719.040 1.00118.15 ATOM 9 N ILE y 2 607.820 474.571 713.705 1.00115.39 ATOM 10 CA ILE y 2 607.470 474.959 712.342 1.00115.39 ATOM 11 C ILE y 2 606.044 475.508 712.368 1.00115.39 ATOM 12 O ILE y 2 605.198 475.029 713.133 1.00115.39 ATOM 13 CB ILE y 2 607.607 473.758 711.379 1.00115.39 ATOM 14 CG1 ILE y 2 609.088 473.322 711.257 1.00115.39 ATOM 15 CG2 ILE y 2 606.938 474.032 710.008 1.00115.39 ATOM 16 CD1 ILE y 2 609.396 471.986 710.548 1.00115.39 ATOM 17 N ASN y 3 605.775 476.521 711.538 1.00108.66 ATOM 18 CA ASN y 3 604.524 477.272 711.594 1.00108.66 ATOM 19 C ASN y 3 603.337 476.469 711.066 1.00108.66 ATOM 20 O ASN y 3 602.268 476.470 711.685 1.00108.66 ATOM 21 CB ASN y 3 604.673 478.581 710.828 1.00108.66 ATOM 22 CG ASN y 3 603.672 479.613 711.265 1.00108.66 ATOM 23 OD1 ASN y 3 602.918 479.399 712.211 1.00108.66 ATOM 24 ND2 ASN y 3 603.676 480.755 710.602 1.00108.66 ATOM 25 N TRP y 4 603.493 475.876 709.869 1.00110.87 ATOM 26 CA TRP y 4 602.586 474.882 709.270 1.00110.87 ATOM 27 C TRP y 4 601.184 475.393 708.931 1.00110.87 ATOM 28 O TRP y 4 600.334 474.611 708.496 1.00110.87 ATOM 29 CB TRP y 4 602.440 473.627 710.150 1.00110.87 ATOM 30 CG TRP y 4 603.554 472.638 710.065 1.00110.87 ATOM 31 CD1 TRP y 4 604.375 472.260 711.079 1.00110.87 ATOM 32 CD2 TRP y 4 603.958 471.878 708.916 1.00110.87 ATOM 33 NE1 TRP y 4 605.275 471.323 710.638 1.00110.87 ATOM 34 CE2 TRP y 4 605.040 471.072 709.312 1.00110.87 ATOM 35 CE3 TRP y 4 603.512 471.804 707.591 1.00110.87 ATOM 36 CZ2 TRP y 4 605.685 470.204 708.435 1.00110.87 ATOM 37 CZ3 TRP y 4 604.155 470.944 706.720 1.00110.87 ATOM 38 CH2 TRP y 4 605.229 470.156 707.146 1.00110.87 ATOM 39 N GLN y 5 600.913 476.682 709.118 1.00100.24 ATOM 40 CA GLN y 5 599.600 477.225 708.812 1.00100.24 ATOM 41 C GLN y 5 599.695 478.232 707.681 1.00100.24 ATOM 42 O GLN y 5 598.975 478.139 706.683 1.00100.24 ATOM 43 CB GLN y 5 598.987 477.868 710.052 1.00100.24 ATOM 44 CG GLN y 5 597.652 478.491 709.762 1.00100.24 ATOM 45 CD GLN y 5 596.516 477.752 710.410 1.00100.24 ATOM 46 OE1 GLN y 5 596.655 477.200 711.499 1.00100.24 ATOM 47 NE2 GLN y 5 595.382 477.720 709.733 1.00100.24 ATOM 48 N VAL y 6 600.604 479.196 707.823 1.00 96.34 ATOM 49 CA VAL y 6 600.861 480.144 706.743 1.00 96.34 ATOM 50 C VAL y 6 601.770 479.531 705.685 1.00 96.34 ATOM 51 O VAL y 6 601.877 480.063 704.570 1.00 96.34 ATOM 52 CB VAL y 6 601.382 481.485 707.312 1.00 96.34 ATOM 53 CG1 VAL y 6 601.763 482.424 706.195 1.00 96.34 ATOM 54 CG2 VAL y 6 600.325 482.196 708.123 1.00 96.34 ATOM 55 N ILE y 7 602.399 478.396 705.988 1.00 97.24 ATOM 56 CA ILE y 7 602.868 477.514 704.927 1.00 97.24 ATOM 57 C ILE y 7 601.683 476.979 704.138 1.00 97.24 ATOM 58 O ILE y 7 601.670 477.057 702.906 1.00 97.24 ATOM 59 CB ILE y 7 603.717 476.366 705.501 1.00 97.24 ATOM 60 CG1 ILE y 7 604.890 476.932 706.294 1.00 97.24 ATOM 61 CG2 ILE y 7 604.226 475.469 704.392 1.00 97.24 ATOM 62 CD1 ILE y 7 605.686 475.894 707.036 1.00 97.24 ATOM 63 N GLY y 8 600.653 476.493 704.829 1.00 91.88 ATOM 64 CA GLY y 8 599.479 475.978 704.148 1.00 91.88 ATOM 65 C GLY y 8 598.597 477.064 703.567 1.00 91.88 ATOM 66 O GLY y 8 597.871 476.830 702.600 1.00 91.88 ATOM 67 N GLN y 9 598.645 478.264 704.146 1.00 90.63 ATOM 68 CA GLN y 9 597.874 479.376 703.606 1.00 90.63 ATOM 69 C GLN y 9 598.489 479.955 702.345 1.00 90.63 ATOM 70 O GLN y 9 597.755 480.493 701.511 1.00 90.63 ATOM 71 CB GLN y 9 597.732 480.493 704.640 1.00 90.63 ATOM 72 CG GLN y 9 596.616 480.276 705.636 1.00 90.63 ATOM 73 CD GLN y 9 596.751 481.156 706.858 1.00 90.63 ATOM 74 OE1 GLN y 9 597.723 481.065 707.600 1.00 90.63 ATOM 75 NE2 GLN y 9 595.762 482.011 707.082 1.00 90.63 ATOM 76 N LEU y 10 599.805 479.856 702.181 1.00 91.42 ATOM 77 CA LEU y 10 600.477 480.407 701.015 1.00 91.42 ATOM 78 C LEU y 10 600.809 479.358 699.968 1.00 91.42 ATOM 79 O LEU y 10 601.076 479.718 698.819 1.00 91.42 ATOM 80 CB LEU y 10 601.753 481.141 701.431 1.00 91.42 ATOM 81 CG LEU y 10 601.529 482.438 702.206 1.00 91.42 ATOM 82 CD1 LEU y 10 602.843 482.979 702.724 1.00 91.42 ATOM 83 CD2 LEU y 10 600.836 483.462 701.334 1.00 91.42 ATOM 84 N VAL y 11 600.805 478.074 700.321 1.00 90.53 ATOM 85 CA VAL y 11 600.870 477.042 699.294 1.00 90.53 ATOM 86 C VAL y 11 599.507 476.836 698.649 1.00 90.53 ATOM 87 O VAL y 11 599.428 476.374 697.504 1.00 90.53 ATOM 88 CB VAL y 11 601.448 475.716 699.846 1.00 90.53 ATOM 89 CG1 VAL y 11 600.438 474.910 700.666 1.00 90.53 ATOM 90 CG2 VAL y 11 602.083 474.865 698.744 1.00 90.53 ATOM 91 N SER y 12 598.421 477.226 699.321 1.00 88.78 ATOM 92 CA SER y 12 597.100 477.175 698.711 1.00 88.78 ATOM 93 C SER y 12 596.786 478.467 697.979 1.00 88.78 ATOM 94 O SER y 12 595.915 478.494 697.107 1.00 88.78 ATOM 95 CB SER y 12 596.037 476.884 699.768 1.00 88.78 ATOM 96 OG SER y 12 595.933 477.958 700.681 1.00 88.78 ATOM 97 N LEU y 13 597.485 479.546 698.324 1.00 87.37 ATOM 98 CA LEU y 13 597.377 480.778 697.557 1.00 87.37 ATOM 99 C LEU y 13 598.102 480.629 696.232 1.00 87.37 ATOM 100 O LEU y 13 597.696 481.207 695.220 1.00 87.37 ATOM 101 CB LEU y 13 597.945 481.952 698.352 1.00 87.37 ATOM 102 CG LEU y 13 597.556 483.337 697.851 1.00 87.37 ATOM 103 CD1 LEU y 13 596.071 483.535 698.029 1.00 87.37 ATOM 104 CD2 LEU y 13 598.333 484.405 698.584 1.00 87.37 ATOM 105 N ALA y 14 599.181 479.850 696.229 1.00 89.54 ATOM 106 CA ALA y 14 599.892 479.546 694.999 1.00 89.54 ATOM 107 C ALA y 14 599.112 478.605 694.098 1.00 89.54 ATOM 108 O ALA y 14 599.291 478.653 692.880 1.00 89.54 ATOM 109 CB ALA y 14 601.257 478.938 695.318 1.00 89.54 ATOM 110 N ILE y 15 598.266 477.743 694.669 1.00 88.98 ATOM 111 CA ILE y 15 597.307 476.988 693.869 1.00 88.98 ATOM 112 C ILE y 15 596.261 477.902 693.251 1.00 88.98 ATOM 113 O ILE y 15 595.984 477.779 692.051 1.00 88.98 ATOM 114 CB ILE y 15 596.653 475.877 694.719 1.00 88.98 ATOM 115 CG1 ILE y 15 597.699 474.853 695.152 1.00 88.98 ATOM 116 CG2 ILE y 15 595.541 475.158 693.973 1.00 88.98 ATOM 117 CD1 ILE y 15 597.254 473.971 696.295 1.00 88.98 ATOM 118 N ILE y 16 595.743 478.862 694.018 1.00 88.82 ATOM 119 CA ILE y 16 594.670 479.752 693.589 1.00 88.82 ATOM 120 C ILE y 16 595.103 480.694 692.469 1.00 88.82 ATOM 121 O ILE y 16 594.418 480.763 691.442 1.00 88.82 ATOM 122 CB ILE y 16 594.115 480.531 694.803 1.00 88.82 ATOM 123 CG1 ILE y 16 593.182 479.635 695.614 1.00 88.82 ATOM 124 CG2 ILE y 16 593.370 481.788 694.418 1.00 88.82 ATOM 125 CD1 ILE y 16 592.019 479.113 694.846 1.00 88.82 ATOM 126 N VAL y 17 596.268 481.334 692.591 1.00 90.44 ATOM 127 CA VAL y 17 596.834 482.167 691.528 1.00 90.44 ATOM 128 C VAL y 17 597.234 481.327 690.306 1.00 90.44 ATOM 129 O VAL y 17 597.169 481.809 689.169 1.00 90.44 ATOM 130 CB VAL y 17 597.994 482.991 692.140 1.00 90.44 ATOM 131 CG1 VAL y 17 598.729 483.860 691.135 1.00 90.44 ATOM 132 CG2 VAL y 17 597.452 483.884 693.230 1.00 90.44 ATOM 133 N LEU y 18 597.519 480.036 690.491 1.00 93.48 ATOM 134 CA LEU y 18 597.724 479.151 689.340 1.00 93.48 ATOM 135 C LEU y 18 596.432 478.511 688.836 1.00 93.48 ATOM 136 O LEU y 18 596.485 477.402 688.294 1.00 93.48 ATOM 137 CB LEU y 18 598.745 478.056 689.657 1.00 93.48 ATOM 138 CG LEU y 18 600.216 478.271 689.291 1.00 93.48 ATOM 139 CD1 LEU y 18 600.348 478.373 687.781 1.00 93.48 ATOM 140 CD2 LEU y 18 600.836 479.484 689.967 1.00 93.48 ATOM 141 N VAL y 19 595.278 479.150 689.020 1.00 89.81 ATOM 142 CA VAL y 19 594.027 478.720 688.407 1.00 89.81 ATOM 143 C VAL y 19 593.539 479.690 687.341 1.00 89.81 ATOM 144 O VAL y 19 593.263 479.269 686.206 1.00 89.81 ATOM 145 CB VAL y 19 592.940 478.506 689.487 1.00 89.81 ATOM 146 CG1 VAL y 19 591.569 478.397 688.886 1.00 89.81 ATOM 147 CG2 VAL y 19 593.233 477.245 690.265 1.00 89.81 ATOM 148 N GLY y 20 593.464 480.982 687.657 1.00 86.53 ATOM 149 CA GLY y 20 592.933 481.993 686.770 1.00 86.53 ATOM 150 C GLY y 20 593.743 482.237 685.515 1.00 86.53 ATOM 151 O GLY y 20 593.234 482.100 684.403 1.00 86.53 ATOM 152 N PRO y 21 595.029 482.582 685.655 1.00 88.89 ATOM 153 CA PRO y 21 595.922 482.539 684.490 1.00 88.89 ATOM 154 C PRO y 21 596.565 481.183 684.247 1.00 88.89 ATOM 155 O PRO y 21 597.721 481.106 683.826 1.00 88.89 ATOM 156 CB PRO y 21 596.983 483.582 684.843 1.00 88.89 ATOM 157 CG PRO y 21 597.033 483.522 686.312 1.00 88.89 ATOM 158 CD PRO y 21 595.610 483.396 686.730 1.00 88.89 ATOM 159 N ALA y 22 595.825 480.110 684.506 1.00 91.46 ATOM 160 CA ALA y 22 596.093 478.821 683.898 1.00 91.46 ATOM 161 C ALA y 22 594.997 478.464 682.916 1.00 91.46 ATOM 162 O ALA y 22 595.195 477.608 682.051 1.00 91.46 ATOM 163 CB ALA y 22 596.220 477.732 684.964 1.00 91.46 ATOM 164 N VAL y 23 593.877 479.183 683.017 1.00 90.26 ATOM 165 CA VAL y 23 592.787 479.032 682.013 1.00 90.26 ATOM 166 C VAL y 23 593.064 480.022 680.879 1.00 90.26 ATOM 167 O VAL y 23 592.907 479.646 679.716 1.00 90.26 ATOM 168 CB VAL y 23 591.403 479.289 682.623 1.00 90.26 ATOM 169 CG1 VAL y 23 590.482 479.927 681.604 1.00 90.26 ATOM 170 CG2 VAL y 23 590.787 478.009 683.148 1.00 90.26 ATOM 171 N ILE y 24 593.420 481.258 681.227 1.00 89.45 ATOM 172 CA ILE y 24 593.723 482.299 680.207 1.00 89.45 ATOM 173 C ILE y 24 594.997 481.904 679.467 1.00 89.45 ATOM 174 O ILE y 24 595.028 482.025 678.242 1.00 89.45 ATOM 175 CB ILE y 24 593.884 483.676 680.863 1.00 89.45 ATOM 176 CG1 ILE y 24 592.593 484.129 681.538 1.00 89.45 ATOM 177 CG2 ILE y 24 594.368 484.692 679.851 1.00 89.45 ATOM 178 CD1 ILE y 24 591.656 484.855 680.618 1.00 89.45 ATOM 179 N PHE y 25 596.009 481.462 680.207 1.00 93.07 ATOM 180 CA PHE y 25 597.297 481.082 679.577 1.00 93.07 ATOM 181 C PHE y 25 597.107 479.849 678.690 1.00 93.07 ATOM 182 O PHE y 25 597.641 479.828 677.580 1.00 93.07 ATOM 183 CB PHE y 25 598.398 480.991 680.633 1.00 93.07 ATOM 184 CG PHE y 25 598.668 482.304 681.324 1.00 93.07 ATOM 185 CD1 PHE y 25 598.277 483.496 680.743 1.00 93.07 ATOM 186 CD2 PHE y 25 599.306 482.352 682.550 1.00 93.07 ATOM 187 CE1 PHE y 25 598.518 484.704 681.374 1.00 93.07 ATOM 188 CE2 PHE y 25 599.550 483.560 683.177 1.00 93.07 ATOM 189 CZ PHE y 25 599.154 484.734 682.590 1.00 93.07 ATOM 190 N LEU y 26 596.347 478.861 679.155 1.00 94.18 ATOM 191 CA LEU y 26 596.123 477.652 678.325 1.00 94.18 ATOM 192 C LEU y 26 595.363 478.051 677.062 1.00 94.18 ATOM 193 O LEU y 26 595.699 477.551 675.984 1.00 94.18 ATOM 194 CB LEU y 26 595.312 476.639 679.131 1.00 94.18 ATOM 195 CG LEU y 26 596.128 475.821 680.122 1.00 94.18 ATOM 196 CD1 LEU y 26 595.450 474.494 680.401 1.00 94.18 ATOM 197 CD2 LEU y 26 597.526 475.598 679.582 1.00 94.18 ATOM 198 N LEU y 27 594.373 478.929 677.203 1.00 95.19 ATOM 199 CA LEU y 27 593.562 479.342 676.034 1.00 95.19 ATOM 200 C LEU y 27 594.438 480.060 675.005 1.00 95.19 ATOM 201 O LEU y 27 594.187 479.886 673.800 1.00 95.19 ATOM 202 CB LEU y 27 592.397 480.203 676.513 1.00 95.19 ATOM 203 CG LEU y 27 591.404 479.452 677.389 1.00 95.19 ATOM 204 CD1 LEU y 27 590.365 480.412 677.939 1.00 95.19 ATOM 205 CD2 LEU y 27 590.729 478.342 676.603 1.00 95.19 ATOM 206 N ALA y 28 595.388 480.878 675.462 1.00 97.46 ATOM 207 CA ALA y 28 596.293 481.585 674.529 1.00 97.46 ATOM 208 C ALA y 28 597.147 480.569 673.764 1.00 97.46 ATOM 209 O ALA y 28 597.298 480.734 672.545 1.00 97.46 ATOM 210 CB ALA y 28 597.156 482.558 675.280 1.00 97.46 ATOM 211 N PHE y 29 597.634 479.527 674.440 1.00 99.72 ATOM 212 CA PHE y 29 598.524 478.550 673.761 1.00 99.72 ATOM 213 C PHE y 29 597.786 477.903 672.587 1.00 99.72 ATOM 214 O PHE y 29 598.347 477.858 671.488 1.00 99.72 ATOM 215 CB PHE y 29 598.970 477.482 674.758 1.00 99.72 ATOM 216 CG PHE y 29 599.598 476.264 674.135 1.00 99.72 ATOM 217 CD1 PHE y 29 600.144 476.321 672.865 1.00 99.72 ATOM 218 CD2 PHE y 29 599.659 475.067 674.825 1.00 99.72 ATOM 219 CE1 PHE y 29 600.730 475.202 672.295 1.00 99.72 ATOM 220 CE2 PHE y 29 600.246 473.949 674.256 1.00 99.72 ATOM 221 CZ PHE y 29 600.779 474.017 672.991 1.00 99.72 ATOM 222 N LYS y 30 596.549 477.465 672.802 1.00 96.03 ATOM 223 CA LYS y 30 595.731 476.907 671.729 1.00 96.03 ATOM 224 C LYS y 30 594.613 477.911 671.450 1.00 96.03 ATOM 225 O LYS y 30 593.850 478.285 672.342 1.00 96.03 ATOM 226 CB LYS y 30 595.228 475.500 672.093 1.00 96.03 ATOM 227 CG LYS y 30 594.410 474.769 671.014 1.00 96.03 ATOM 228 CD LYS y 30 593.943 473.325 671.367 1.00 96.03 ATOM 229 CE LYS y 30 593.108 472.608 670.296 1.00 96.03 ATOM 230 NZ LYS y 30 592.710 471.234 670.731 1.00 96.03 ATOM 231 N LYS y 31 594.532 478.357 670.193 1.00 96.04 ATOM 232 CA LYS y 31 593.920 479.633 669.827 1.00 96.04 ATOM 233 C LYS y 31 592.400 479.602 669.927 1.00 96.04 ATOM 234 O LYS y 31 591.700 479.502 668.919 1.00 96.04 ATOM 235 CB LYS y 31 594.320 480.011 668.397 1.00 96.04 ATOM 236 CG LYS y 31 595.799 480.328 668.239 1.00 96.04 ATOM 237 CD LYS y 31 596.103 480.666 666.788 1.00 96.04 ATOM 238 CE LYS y 31 597.554 481.019 666.543 1.00 96.04 ATOM 239 NZ LYS y 31 597.800 481.320 665.100 1.00 96.04 ATOM 240 N GLY y 32 591.888 479.741 671.148 1.00 93.75 ATOM 241 CA GLY y 32 590.459 479.629 671.370 1.00 93.75 ATOM 242 C GLY y 32 589.724 480.919 671.664 1.00 93.75 ATOM 243 O GLY y 32 589.448 481.704 670.749 1.00 93.75 ATOM 244 N ASN y 33 589.391 481.110 672.945 1.00 89.23 ATOM 245 CA ASN y 33 588.654 482.252 673.514 1.00 89.23 ATOM 246 C ASN y 33 587.306 482.506 672.839 1.00 89.23 ATOM 247 O ASN y 33 586.657 481.571 672.364 1.00 89.23 ATOM 248 CB ASN y 33 589.515 483.523 673.478 1.00 89.23 ATOM 249 CG ASN y 33 590.288 483.740 674.767 1.00 89.23 ATOM 250 OD1 ASN y 33 589.722 483.705 675.854 1.00 89.23 ATOM 251 ND2 ASN y 33 591.589 483.963 674.647 1.00 89.23 TER