HEADER RNA BINDING PROTEIN 31-DEC-69 7ZGR TITLE Polymerase module of yeast CPF in complex with Mpe1, the yPIM of Cft2 TITLE 2 and the pre-cleaved CYC1 RNA COMPND MOL_ID: 2; COMPND 2 MOLECULE: mRNA 3'-end-processing protein YTH1; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 7ZGR B 1 208 UNP A0A6A5Q2 A0A6A5Q2R8_ 1 208 SEQRES 1 B 35 PHE SER LEU ASP PRO ASP ARG PRO ILE CYS GLU PHE TYR SEQRES 2 B 35 ASN SER ARG GLU GLY PRO LYS SER CYS PRO ARG GLY PRO SEQRES 3 B 35 LEU CYS PRO LYS LYS HIS VAL LEU PRO ATOM 1 N PHE B 25 143.535 114.153 146.690 1.00 77.32 ATOM 2 CA PHE B 25 144.594 114.954 146.102 1.00 65.08 ATOM 3 C PHE B 25 145.913 114.663 146.805 1.00 75.67 ATOM 4 O PHE B 25 145.943 114.178 147.938 1.00 93.28 ATOM 5 CB PHE B 25 144.245 116.446 146.203 1.00 64.05 ATOM 6 CG PHE B 25 145.184 117.350 145.466 1.00 69.29 ATOM 7 CD1 PHE B 25 145.490 117.121 144.138 1.00 74.01 ATOM 8 CD2 PHE B 25 145.747 118.444 146.099 1.00 70.38 ATOM 9 CE1 PHE B 25 146.348 117.958 143.461 1.00 76.59 ATOM 10 CE2 PHE B 25 146.605 119.283 145.426 1.00 70.45 ATOM 11 CZ PHE B 25 146.906 119.041 144.105 1.00 73.49 ATOM 12 N SER B 26 147.012 114.953 146.116 1.00 75.37 ATOM 13 CA SER B 26 148.337 114.774 146.691 1.00 76.84 ATOM 14 C SER B 26 149.283 115.784 146.063 1.00 83.51 ATOM 15 O SER B 26 148.937 116.481 145.106 1.00 93.50 ATOM 16 CB SER B 26 148.851 113.346 146.489 1.00 78.91 ATOM 17 OG SER B 26 149.523 113.222 145.250 1.00 91.78 ATOM 18 N LEU B 27 150.492 115.856 146.613 1.00 69.18 ATOM 19 CA LEU B 27 151.508 116.780 146.132 1.00 71.39 ATOM 20 C LEU B 27 152.328 116.211 144.984 1.00 78.44 ATOM 21 O LEU B 27 153.263 116.871 144.519 1.00 82.23 ATOM 22 CB LEU B 27 152.430 117.197 147.279 1.00 69.85 ATOM 23 CG LEU B 27 151.724 117.625 148.564 1.00 70.07 ATOM 24 CD1 LEU B 27 152.741 117.969 149.636 1.00 77.80 ATOM 25 CD2 LEU B 27 150.799 118.800 148.302 1.00 66.85 ATOM 26 N ASP B 28 152.002 115.006 144.516 1.00 87.32 ATOM 27 CA ASP B 28 152.638 114.403 143.346 1.00 88.73 ATOM 28 C ASP B 28 151.559 114.220 142.288 1.00 92.00 ATOM 29 O ASP B 28 150.857 113.197 142.272 1.00 97.33 ATOM 30 CB ASP B 28 153.303 113.074 143.698 1.00 91.63 ATOM 31 CG ASP B 28 153.997 112.436 142.509 1.00 99.08 ATOM 32 OD1 ASP B 28 154.270 113.150 141.522 1.00 93.17 ATOM 33 OD2 ASP B 28 154.276 111.221 142.566 1.00 99.66 ATOM 34 N PRO B 29 151.387 115.190 141.387 1.00 84.46 ATOM 35 CA PRO B 29 150.320 115.078 140.380 1.00 81.73 ATOM 36 C PRO B 29 150.488 113.903 139.436 1.00 84.57 ATOM 37 O PRO B 29 149.489 113.420 138.890 1.00 88.54 ATOM 38 CB PRO B 29 150.405 116.415 139.632 1.00 78.98 ATOM 39 CG PRO B 29 151.802 116.879 139.850 1.00 85.37 ATOM 40 CD PRO B 29 152.169 116.427 141.230 1.00 83.57 ATOM 41 N ASP B 30 151.714 113.422 139.225 1.00 90.79 ATOM 42 CA ASP B 30 151.974 112.309 138.323 1.00 94.30 ATOM 43 C ASP B 30 152.111 110.983 139.062 1.00 95.75 ATOM 44 O ASP B 30 152.850 110.097 138.618 1.00 96.44 ATOM 45 CB ASP B 30 153.224 112.585 137.488 1.00 96.49 ATOM 46 CG ASP B 30 153.130 113.884 136.714 1.00101.30 ATOM 47 OD1 ASP B 30 152.630 113.861 135.571 1.00100.14 ATOM 48 OD2 ASP B 30 153.558 114.929 137.249 1.00100.64 ATOM 49 N ARG B 31 151.416 110.830 140.185 1.00 90.59 ATOM 50 CA ARG B 31 151.447 109.574 140.911 1.00 85.40 ATOM 51 C ARG B 31 150.735 108.486 140.109 1.00 92.31 ATOM 52 O ARG B 31 149.797 108.769 139.358 1.00 94.98 ATOM 53 CB ARG B 31 150.791 109.731 142.279 1.00 82.12 ATOM 54 CG ARG B 31 149.334 110.142 142.222 1.00 84.58 ATOM 55 CD ARG B 31 148.838 110.601 143.578 1.00 82.00 ATOM 56 NE ARG B 31 147.422 110.947 143.550 1.00 86.75 ATOM 57 CZ ARG B 31 146.942 112.101 143.109 1.00 91.68 ATOM 58 NH1 ARG B 31 147.739 113.053 142.653 1.00 87.67 ATOM 59 NH2 ARG B 31 145.628 112.305 143.125 1.00 93.74 ATOM 60 N PRO B 32 151.169 107.234 140.239 1.00 91.29 ATOM 61 CA PRO B 32 150.534 106.155 139.476 1.00 89.81 ATOM 62 C PRO B 32 149.101 105.915 139.921 1.00 90.16 ATOM 63 O PRO B 32 148.722 106.187 141.063 1.00 91.23 ATOM 64 CB PRO B 32 151.419 104.940 139.776 1.00 89.24 ATOM 65 CG PRO B 32 152.076 105.263 141.071 1.00 88.23 ATOM 66 CD PRO B 32 152.285 106.746 141.066 1.00 86.24 ATOM 67 N ILE B 33 148.297 105.406 138.988 1.00 97.82 ATOM 68 CA ILE B 33 146.910 105.075 139.290 1.00 98.61 ATOM 69 C ILE B 33 146.872 103.803 140.123 1.00 98.73 ATOM 70 O ILE B 33 147.575 102.828 139.829 1.00 98.77 ATOM 71 CB ILE B 33 146.084 104.917 138.003 1.00 92.80 ATOM 72 CG1 ILE B 33 146.468 105.956 136.941 1.00 95.07 ATOM 73 CG2 ILE B 33 144.598 105.005 138.314 1.00 93.10 ATOM 74 CD1 ILE B 33 147.587 105.527 135.998 1.00 93.14 ATOM 75 N CYS B 34 146.054 103.808 141.173 1.00104.47 ATOM 76 CA CYS B 34 145.938 102.635 142.025 1.00102.39 ATOM 77 C CYS B 34 145.300 101.481 141.263 1.00108.79 ATOM 78 O CYS B 34 144.321 101.661 140.533 1.00109.37 ATOM 79 CB CYS B 34 145.114 102.960 143.270 1.00101.11 ATOM 80 SG CYS B 34 144.907 101.569 144.401 1.00117.94 ATOM 81 N GLU B 35 145.863 100.290 141.436 1.00113.46 ATOM 82 CA GLU B 35 145.362 99.088 140.785 1.00112.74 ATOM 83 C GLU B 35 144.262 98.400 141.580 1.00111.80 ATOM 84 O GLU B 35 143.703 97.407 141.104 1.00115.12 ATOM 85 CB GLU B 35 146.509 98.102 140.535 1.00111.60 ATOM 86 CG GLU B 35 147.036 97.413 141.786 1.00112.29 ATOM 87 CD GLU B 35 147.811 98.348 142.693 1.00114.81 ATOM 88 OE1 GLU B 35 148.316 99.376 142.197 1.00115.49 ATOM 89 OE2 GLU B 35 147.917 98.054 143.902 1.00114.26 ATOM 90 N PHE B 36 143.939 98.897 142.771 1.00108.67 ATOM 91 CA PHE B 36 142.880 98.328 143.594 1.00110.06 ATOM 92 C PHE B 36 141.588 99.128 143.535 1.00109.68 ATOM 93 O PHE B 36 140.501 98.544 143.586 1.00113.20 ATOM 94 CB PHE B 36 143.340 98.222 145.050 1.00108.92 ATOM 95 CG PHE B 36 144.387 97.173 145.281 1.00110.43 ATOM 96 CD1 PHE B 36 144.234 95.897 144.766 1.00110.76 ATOM 97 CD2 PHE B 36 145.522 97.460 146.019 1.00109.37 ATOM 98 CE1 PHE B 36 145.195 94.929 144.977 1.00110.65 ATOM 99 CE2 PHE B 36 146.487 96.496 146.235 1.00111.54 ATOM 100 CZ PHE B 36 146.324 95.229 145.713 1.00113.33 ATOM 101 N TYR B 37 141.680 100.450 143.433 1.00101.42 ATOM 102 CA TYR B 37 140.490 101.287 143.431 1.00101.25 ATOM 103 C TYR B 37 139.671 101.066 142.166 1.00103.83 ATOM 104 O TYR B 37 140.212 100.969 141.062 1.00105.28 ATOM 105 CB TYR B 37 140.876 102.760 143.551 1.00101.14 ATOM 106 CG TYR B 37 139.696 103.689 143.717 1.00104.02 ATOM 107 CD1 TYR B 37 139.158 103.940 144.971 1.00103.82 ATOM 108 CD2 TYR B 37 139.123 104.318 142.621 1.00104.47 ATOM 109 CE1 TYR B 37 138.081 104.787 145.128 1.00104.93 ATOM 110 CE2 TYR B 37 138.045 105.167 142.769 1.00103.58 ATOM 111 CZ TYR B 37 137.529 105.399 144.024 1.00105.20 ATOM 112 OH TYR B 37 136.455 106.245 144.178 1.00104.49 ATOM 113 N ASN B 38 138.354 100.983 142.338 1.00110.33 ATOM 114 CA ASN B 38 137.417 100.895 141.228 1.00112.22 ATOM 115 C ASN B 38 136.364 101.977 141.403 1.00114.01 ATOM 116 O ASN B 38 135.746 102.078 142.468 1.00114.99 ATOM 117 CB ASN B 38 136.761 99.513 141.158 1.00112.47 ATOM 118 CG ASN B 38 135.722 99.418 140.061 1.00116.78 ATOM 119 OD1 ASN B 38 134.547 99.717 140.275 1.00118.58 ATOM 120 ND2 ASN B 38 136.150 99.000 138.876 1.00115.40 ATOM 121 N SER B 39 136.167 102.788 140.360 1.00112.75 ATOM 122 CA SER B 39 135.225 103.899 140.457 1.00113.43 ATOM 123 C SER B 39 133.802 103.405 140.682 1.00115.01 ATOM 124 O SER B 39 133.069 103.958 141.511 1.00114.66 ATOM 125 CB SER B 39 135.301 104.759 139.195 1.00112.58 ATOM 126 OG SER B 39 136.625 104.818 138.697 1.00113.64 ATOM 127 N ARG B 40 133.393 102.364 139.955 1.00121.84 ATOM 128 CA ARG B 40 132.043 101.835 140.120 1.00120.94 ATOM 129 C ARG B 40 131.863 101.161 141.474 1.00122.55 ATOM 130 O ARG B 40 130.797 101.285 142.088 1.00121.07 ATOM 131 CB ARG B 40 131.721 100.856 138.992 1.00115.71 ATOM 132 N GLU B 41 132.884 100.451 141.955 1.00128.16 ATOM 133 CA GLU B 41 132.774 99.738 143.221 1.00127.28 ATOM 134 C GLU B 41 132.779 100.673 144.424 1.00127.23 ATOM 135 O GLU B 41 132.293 100.287 145.493 1.00125.42 ATOM 136 CB GLU B 41 133.908 98.717 143.343 1.00126.76 ATOM 137 CG GLU B 41 133.714 97.688 144.445 1.00127.44 ATOM 138 CD GLU B 41 134.774 96.605 144.421 1.00129.66 ATOM 139 OE1 GLU B 41 135.660 96.659 143.543 1.00131.17 ATOM 140 OE2 GLU B 41 134.722 95.701 145.281 1.00128.38 ATOM 141 N GLY B 42 133.303 101.887 144.277 1.00124.46 ATOM 142 CA GLY B 42 133.264 102.865 145.337 1.00123.01 ATOM 143 C GLY B 42 134.560 102.965 146.115 1.00126.01 ATOM 144 O GLY B 42 135.532 102.250 145.852 1.00124.66 ATOM 145 N PRO B 43 134.595 103.871 147.098 1.00122.02 ATOM 146 CA PRO B 43 135.821 104.065 147.889 1.00119.84 ATOM 147 C PRO B 43 136.210 102.867 148.738 1.00119.27 ATOM 148 O PRO B 43 137.357 102.810 149.200 1.00115.14 ATOM 149 CB PRO B 43 135.485 105.277 148.772 1.00116.59 ATOM 150 CG PRO B 43 134.298 105.924 148.124 1.00115.31 ATOM 151 CD PRO B 43 133.534 104.817 147.478 1.00116.33 ATOM 152 N LYS B 44 135.306 101.916 148.960 1.00124.33 ATOM 153 CA LYS B 44 135.595 100.763 149.803 1.00124.02 ATOM 154 C LYS B 44 136.387 99.680 149.083 1.00124.93 ATOM 155 O LYS B 44 136.716 98.663 149.703 1.00123.46 ATOM 156 CB LYS B 44 134.291 100.171 150.344 1.00120.80 ATOM 157 N SER B 45 136.699 99.868 147.803 1.00119.06 ATOM 158 CA SER B 45 137.411 98.862 147.027 1.00118.08 ATOM 159 C SER B 45 138.924 98.941 147.183 1.00117.78 ATOM 160 O SER B 45 139.631 98.107 146.607 1.00118.73 ATOM 161 CB SER B 45 137.042 98.988 145.547 1.00117.91 ATOM 162 OG SER B 45 137.959 99.822 144.864 1.00118.57 ATOM 163 N CYS B 46 139.439 99.912 147.935 1.00116.15 ATOM 164 CA CYS B 46 140.876 100.072 148.112 1.00118.34 ATOM 165 C CYS B 46 141.275 99.632 149.511 1.00118.87 ATOM 166 O CYS B 46 140.789 100.210 150.496 1.00117.22 ATOM 167 CB CYS B 46 141.292 101.522 147.872 1.00119.63 ATOM 168 SG CYS B 46 143.079 101.773 147.776 1.00123.05 ATOM 169 N PRO B 47 142.133 98.619 149.652 1.00114.50 ATOM 170 CA PRO B 47 142.560 98.204 150.998 1.00113.89 ATOM 171 C PRO B 47 143.274 99.297 151.772 1.00114.13 ATOM 172 O PRO B 47 143.126 99.371 152.998 1.00114.71 ATOM 173 CB PRO B 47 143.486 97.013 150.717 1.00110.18 ATOM 174 CG PRO B 47 143.956 97.221 149.317 1.00109.72 ATOM 175 CD PRO B 47 142.804 97.847 148.594 1.00111.54 ATOM 176 N ARG B 48 144.042 100.151 151.095 1.00106.07 ATOM 177 CA ARG B 48 144.766 101.216 151.777 1.00104.90 ATOM 178 C ARG B 48 143.861 102.356 152.222 1.00105.74 ATOM 179 O ARG B 48 144.322 103.237 152.955 1.00104.94 ATOM 180 CB ARG B 48 145.875 101.757 150.874 1.00105.73 ATOM 181 CG ARG B 48 147.011 100.777 150.639 1.00107.11 ATOM 182 CD ARG B 48 148.038 101.339 149.671 1.00106.60 ATOM 183 NE ARG B 48 147.563 101.308 148.294 1.00112.53 ATOM 184 CZ ARG B 48 148.126 100.601 147.324 1.00111.00 ATOM 185 NH1 ARG B 48 149.191 99.848 147.546 1.00108.65 ATOM 186 NH2 ARG B 48 147.608 100.650 146.100 1.00109.32 ATOM 187 N GLY B 49 142.600 102.365 151.801 1.00106.73 ATOM 188 CA GLY B 49 141.672 103.395 152.200 1.00105.93 ATOM 189 C GLY B 49 141.889 104.690 151.445 1.00108.18 ATOM 190 O GLY B 49 142.628 104.745 150.458 1.00109.73 ATOM 191 N PRO B 50 141.238 105.763 151.899 1.00108.17 ATOM 192 CA PRO B 50 141.393 107.059 151.217 1.00108.54 ATOM 193 C PRO B 50 142.808 107.605 151.254 1.00107.78 ATOM 194 O PRO B 50 143.153 108.445 150.414 1.00107.98 ATOM 195 CB PRO B 50 140.420 107.976 151.972 1.00103.42 ATOM 196 CG PRO B 50 139.490 107.055 152.700 1.00103.59 ATOM 197 CD PRO B 50 140.291 105.836 153.022 1.00104.38 ATOM 198 N LEU B 51 143.641 107.156 152.192 1.00104.44 ATOM 199 CA LEU B 51 145.018 107.618 152.304 1.00106.06 ATOM 200 C LEU B 51 145.972 106.867 151.384 1.00107.40 ATOM 201 O LEU B 51 147.182 106.858 151.644 1.00107.97 ATOM 202 CB LEU B 51 145.495 107.503 153.754 1.00105.24 ATOM 203 CG LEU B 51 144.653 108.221 154.809 1.00105.07 ATOM 204 CD1 LEU B 51 145.349 108.189 156.158 1.00102.39 ATOM 205 CD2 LEU B 51 144.382 109.652 154.385 1.00101.93 ATOM 206 N CYS B 52 145.461 106.240 150.333 1.00107.80 ATOM 207 CA CYS B 52 146.313 105.502 149.413 1.00105.72 ATOM 208 C CYS B 52 147.281 106.457 148.720 1.00102.26 ATOM 209 O CYS B 52 146.856 107.506 148.217 1.00101.49 ATOM 210 CB CYS B 52 145.466 104.765 148.377 1.00108.81 ATOM 211 SG CYS B 52 146.398 103.677 147.276 1.00123.41 ATOM 212 N PRO B 53 148.577 106.143 148.680 1.00 99.66 ATOM 213 CA PRO B 53 149.528 107.037 148.001 1.00 99.88 ATOM 214 C PRO B 53 149.297 107.148 146.506 1.00101.39 ATOM 215 O PRO B 53 149.775 108.109 145.891 1.00102.71 ATOM 216 CB PRO B 53 150.889 106.400 148.311 1.00 99.03 ATOM 217 CG PRO B 53 150.579 104.961 148.551 1.00102.07 ATOM 218 CD PRO B 53 149.233 104.939 149.217 1.00102.85 ATOM 219 N LYS B 54 148.587 106.202 145.902 1.00 96.01 ATOM 220 CA LYS B 54 148.345 106.214 144.469 1.00 93.98 ATOM 221 C LYS B 54 147.118 107.071 144.162 1.00 92.09 ATOM 222 O LYS B 54 146.592 107.777 145.026 1.00 91.91 ATOM 223 CB LYS B 54 148.201 104.785 143.952 1.00 95.32 ATOM 224 CG LYS B 54 149.332 103.864 144.372 1.00 97.15 ATOM 225 CD LYS B 54 149.275 102.542 143.628 1.00 98.97 ATOM 226 CE LYS B 54 150.520 102.331 142.784 1.00 98.30 ATOM 227 NZ LYS B 54 151.748 102.253 143.621 1.00 95.65 ATOM 228 N LYS B 55 146.647 107.014 142.920 1.00 92.99 ATOM 229 CA LYS B 55 145.581 107.883 142.443 1.00 93.09 ATOM 230 C LYS B 55 144.263 107.123 142.394 1.00 93.42 ATOM 231 O LYS B 55 144.205 106.001 141.881 1.00 99.21 ATOM 232 CB LYS B 55 145.920 108.439 141.059 1.00 90.63 ATOM 233 CG LYS B 55 145.090 109.640 140.651 1.00 91.49 ATOM 234 CD LYS B 55 145.549 110.194 139.314 1.00 93.47 ATOM 235 CE LYS B 55 146.857 110.952 139.450 1.00 92.22 ATOM 236 NZ LYS B 55 147.751 110.728 138.283 1.00 92.76 ATOM 237 N HIS B 56 143.211 107.737 142.929 1.00 95.18 ATOM 238 CA HIS B 56 141.859 107.184 142.904 1.00 94.35 ATOM 239 C HIS B 56 141.007 108.090 142.023 1.00 97.62 ATOM 240 O HIS B 56 140.501 109.119 142.481 1.00 99.81 ATOM 241 CB HIS B 56 141.283 107.076 144.313 1.00 95.10 ATOM 242 CG HIS B 56 141.936 106.025 145.154 1.00 99.06 ATOM 243 ND1 HIS B 56 141.531 105.747 146.442 1.00 98.13 ATOM 244 CD2 HIS B 56 142.964 105.184 144.893 1.00101.86 ATOM 245 CE1 HIS B 56 142.282 104.780 146.938 1.00100.26 ATOM 246 NE2 HIS B 56 143.159 104.421 146.018 1.00103.15 ATOM 247 N VAL B 57 140.844 107.703 140.760 1.00 91.25 ATOM 248 CA VAL B 57 140.107 108.530 139.814 1.00 88.35 ATOM 249 C VAL B 57 138.616 108.429 140.101 1.00 92.40 ATOM 250 O VAL B 57 138.047 107.331 140.149 1.00 96.73 ATOM 251 CB VAL B 57 140.425 108.111 138.372 1.00 88.09 ATOM 252 CG1 VAL B 57 139.701 109.012 137.387 1.00 90.73 ATOM 253 CG2 VAL B 57 141.924 108.145 138.131 1.00 87.02 ATOM 254 N LEU B 58 137.976 109.578 140.294 1.00 91.91 ATOM 255 CA LEU B 58 136.541 109.606 140.513 1.00 94.67 ATOM 256 C LEU B 58 135.803 109.224 139.230 1.00 95.47 ATOM 257 O LEU B 58 136.323 109.412 138.127 1.00 97.40 ATOM 258 CB LEU B 58 136.100 110.991 140.978 1.00 93.38 ATOM 259 CG LEU B 58 136.454 111.371 142.416 1.00 93.65 ATOM 260 CD1 LEU B 58 137.729 112.200 142.458 1.00 89.87 ATOM 261 CD2 LEU B 58 135.302 112.118 143.067 1.00 93.22 ATOM 262 N PRO B 59 134.591 108.677 139.347 1.00 90.95 ATOM 263 CA PRO B 59 133.845 108.288 138.138 1.00 89.62 ATOM 264 C PRO B 59 133.482 109.456 137.240 1.00 89.12 ATOM 265 O PRO B 59 133.166 109.235 136.065 1.00 87.90 ATOM 266 CB PRO B 59 132.591 107.607 138.703 1.00 90.36 ATOM 267 CG PRO B 59 132.452 108.153 140.083 1.00 90.38 ATOM 268 CD PRO B 59 133.850 108.353 140.578 1.00 89.78 TER