HEADER TRANSCRIPTION 31-DEC-69 8AC1 TITLE RNA polymerase at U-rich pause bound to non-regulatory RNA - TITLE 2 inactive, open clamp state COMPND MOL_ID: 4; COMPND 2 MOLECULE: DNA-directed RNA polymerase subunit omega; COMPND 3 CHAIN: E; COMPND 4 EC: 2.7.7.6; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 8AC1 E 1 91 UNP P0A800 RPOZ_ECOLI 1 91 SEQRES 1 E 28 ALA ARG VAL THR VAL GLN ASP ALA VAL GLU LYS ILE GLY SEQRES 2 E 28 ASN ARG PHE ASP LEU VAL LEU VAL ALA ALA ARG ARG ALA SEQRES 3 E 28 ARG GLN ATOM 1 N ALA E 2 176.809 146.643 123.645 1.00134.38 ATOM 2 CA ALA E 2 177.409 145.386 123.216 1.00134.38 ATOM 3 C ALA E 2 177.913 144.583 124.410 1.00134.38 ATOM 4 O ALA E 2 177.216 143.699 124.909 1.00134.38 ATOM 5 CB ALA E 2 178.542 145.645 122.236 1.00134.38 ATOM 6 N ARG E 3 179.126 144.891 124.864 1.00135.79 ATOM 7 CA ARG E 3 179.715 144.142 125.965 1.00135.79 ATOM 8 C ARG E 3 178.977 144.429 127.267 1.00135.79 ATOM 9 O ARG E 3 178.631 145.574 127.570 1.00135.79 ATOM 10 CB ARG E 3 181.207 144.468 126.104 1.00135.79 ATOM 11 CG ARG E 3 181.552 145.816 126.733 1.00135.79 ATOM 12 CD ARG E 3 181.460 146.967 125.739 1.00135.79 ATOM 13 NE ARG E 3 182.027 148.194 126.287 1.00135.79 ATOM 14 CZ ARG E 3 181.897 149.394 125.739 1.00135.79 ATOM 15 NH1 ARG E 3 181.220 149.570 124.617 1.00135.79 ATOM 16 NH2 ARG E 3 182.459 150.442 126.332 1.00135.79 ATOM 17 N VAL E 4 178.709 143.368 128.026 1.00130.52 ATOM 18 CA VAL E 4 178.018 143.498 129.306 1.00130.52 ATOM 19 C VAL E 4 178.741 142.808 130.451 1.00130.52 ATOM 20 O VAL E 4 178.573 143.211 131.617 1.00130.52 ATOM 21 CB VAL E 4 176.572 142.964 129.186 1.00130.52 ATOM 22 CG1 VAL E 4 176.576 141.469 128.904 1.00130.52 ATOM 23 CG2 VAL E 4 175.764 143.287 130.433 1.00130.52 ATOM 24 N THR E 5 179.573 141.804 130.197 1.00144.35 ATOM 25 CA THR E 5 180.225 141.035 131.245 1.00144.35 ATOM 26 C THR E 5 181.718 141.333 131.242 1.00144.35 ATOM 27 O THR E 5 182.349 141.355 130.180 1.00144.35 ATOM 28 CB THR E 5 179.981 139.538 131.050 1.00144.35 ATOM 29 OG1 THR E 5 178.580 139.304 130.870 1.00144.35 ATOM 30 CG2 THR E 5 180.461 138.760 132.257 1.00144.35 ATOM 31 N VAL E 6 182.275 141.561 132.429 1.00155.69 ATOM 32 CA VAL E 6 183.696 141.852 132.575 1.00155.69 ATOM 33 C VAL E 6 184.371 140.703 133.312 1.00155.69 ATOM 34 O VAL E 6 185.424 140.880 133.936 1.00155.69 ATOM 35 CB VAL E 6 183.907 143.185 133.309 1.00155.69 ATOM 36 CG1 VAL E 6 183.426 144.337 132.446 1.00155.69 ATOM 37 CG2 VAL E 6 183.170 143.171 134.633 1.00155.69 ATOM 38 N GLN E 7 183.770 139.512 133.229 1.00160.50 ATOM 39 CA GLN E 7 184.300 138.355 133.943 1.00160.50 ATOM 40 C GLN E 7 185.702 138.005 133.467 1.00160.50 ATOM 41 O GLN E 7 186.514 137.497 134.248 1.00160.50 ATOM 42 CB GLN E 7 183.360 137.160 133.774 1.00160.50 ATOM 43 CG GLN E 7 183.787 135.898 134.507 1.00160.50 ATOM 44 CD GLN E 7 183.085 134.657 133.986 1.00160.50 ATOM 45 OE1 GLN E 7 182.280 134.728 133.059 1.00160.50 ATOM 46 NE2 GLN E 7 183.376 133.515 134.594 1.00160.50 ATOM 47 N ASP E 8 186.011 138.278 132.198 1.00186.20 ATOM 48 CA ASP E 8 187.365 138.053 131.705 1.00186.20 ATOM 49 C ASP E 8 188.369 138.920 132.455 1.00186.20 ATOM 50 O ASP E 8 189.397 138.426 132.938 1.00186.20 ATOM 51 CB ASP E 8 187.421 138.323 130.201 1.00186.20 ATOM 52 CG ASP E 8 187.097 139.763 129.854 1.00186.20 ATOM 53 OD1 ASP E 8 186.043 140.258 130.306 1.00186.20 ATOM 54 OD2 ASP E 8 187.899 140.401 129.139 1.00186.20 ATOM 55 N ALA E 9 188.071 140.212 132.594 1.00187.31 ATOM 56 CA ALA E 9 188.959 141.096 133.337 1.00187.31 ATOM 57 C ALA E 9 189.029 140.687 134.800 1.00187.31 ATOM 58 O ALA E 9 190.090 140.780 135.429 1.00187.31 ATOM 59 CB ALA E 9 188.495 142.545 133.202 1.00187.31 ATOM 60 N VAL E 10 187.907 140.224 135.355 1.00185.78 ATOM 61 CA VAL E 10 187.894 139.777 136.745 1.00185.78 ATOM 62 C VAL E 10 188.829 138.590 136.933 1.00185.78 ATOM 63 O VAL E 10 189.564 138.508 137.924 1.00185.78 ATOM 64 CB VAL E 10 186.458 139.433 137.179 1.00185.78 ATOM 65 CG1 VAL E 10 186.448 138.861 138.589 1.00185.78 ATOM 66 CG2 VAL E 10 185.574 140.654 137.076 1.00185.78 ATOM 67 N GLU E 11 188.815 137.649 135.991 1.00190.19 ATOM 68 CA GLU E 11 189.621 136.446 136.132 1.00190.19 ATOM 69 C GLU E 11 191.067 136.633 135.691 1.00190.19 ATOM 70 O GLU E 11 191.899 135.775 136.001 1.00190.19 ATOM 71 CB GLU E 11 188.986 135.288 135.353 1.00190.19 ATOM 72 CG GLU E 11 189.063 135.413 133.844 1.00190.19 ATOM 73 CD GLU E 11 190.253 134.680 133.260 1.00190.19 ATOM 74 OE1 GLU E 11 190.775 133.764 133.929 1.00190.19 ATOM 75 OE2 GLU E 11 190.670 135.023 132.135 1.00190.19 ATOM 76 N LYS E 12 191.400 137.717 134.988 1.00195.73 ATOM 77 CA LYS E 12 192.786 137.929 134.581 1.00195.73 ATOM 78 C LYS E 12 193.474 139.061 135.333 1.00195.73 ATOM 79 O LYS E 12 194.548 138.849 135.907 1.00195.73 ATOM 80 CB LYS E 12 192.877 138.162 133.060 1.00195.73 ATOM 81 CG LYS E 12 192.194 139.407 132.518 1.00195.73 ATOM 82 CD LYS E 12 192.324 139.480 131.008 1.00195.73 ATOM 83 CE LYS E 12 191.620 140.704 130.447 1.00195.73 ATOM 84 NZ LYS E 12 190.151 140.496 130.312 1.00195.73 ATOM 85 N ILE E 13 192.892 140.260 135.356 1.00191.08 ATOM 86 CA ILE E 13 193.508 141.418 136.000 1.00191.08 ATOM 87 C ILE E 13 192.543 141.937 137.058 1.00191.08 ATOM 88 O ILE E 13 192.433 143.148 137.284 1.00191.08 ATOM 89 CB ILE E 13 193.870 142.507 134.972 1.00191.08 ATOM 90 CG1 ILE E 13 194.431 141.872 133.700 1.00191.08 ATOM 91 CG2 ILE E 13 194.914 143.456 135.538 1.00191.08 ATOM 92 CD1 ILE E 13 194.517 142.819 132.528 1.00191.08 ATOM 93 N GLY E 14 191.831 141.018 137.702 1.00187.29 ATOM 94 CA GLY E 14 190.676 141.345 138.511 1.00187.29 ATOM 95 C GLY E 14 190.829 142.394 139.591 1.00187.29 ATOM 96 O GLY E 14 191.498 142.179 140.606 1.00187.29 ATOM 97 N ASN E 15 190.198 143.543 139.360 1.00153.44 ATOM 98 CA ASN E 15 189.919 144.523 140.405 1.00153.44 ATOM 99 C ASN E 15 188.857 145.457 139.855 1.00153.44 ATOM 100 O ASN E 15 189.081 146.106 138.830 1.00153.44 ATOM 101 CB ASN E 15 191.165 145.298 140.813 1.00153.44 ATOM 102 CG ASN E 15 190.929 146.166 142.029 1.00153.44 ATOM 103 OD1 ASN E 15 189.976 145.955 142.776 1.00153.44 ATOM 104 ND2 ASN E 15 191.797 147.146 142.236 1.00153.44 ATOM 105 N ARG E 16 187.719 145.534 140.524 1.00138.14 ATOM 106 CA ARG E 16 186.591 146.272 139.959 1.00138.14 ATOM 107 C ARG E 16 186.813 147.759 139.921 1.00138.14 ATOM 108 O ARG E 16 185.901 148.495 139.528 1.00138.14 ATOM 109 CB ARG E 16 185.317 145.968 140.748 1.00138.14 ATOM 110 CG ARG E 16 184.947 144.500 140.809 1.00138.14 ATOM 111 CD ARG E 16 185.223 143.800 139.492 1.00138.14 ATOM 112 NE ARG E 16 184.622 142.473 139.433 1.00138.14 ATOM 113 CZ ARG E 16 183.319 142.226 139.450 1.00138.14 ATOM 114 NH1 ARG E 16 182.429 143.203 139.476 1.00138.14 ATOM 115 NH2 ARG E 16 182.897 140.965 139.420 1.00138.14 ATOM 116 N PHE E 17 187.984 148.250 140.309 1.00135.35 ATOM 117 CA PHE E 17 188.221 149.683 140.394 1.00135.35 ATOM 118 C PHE E 17 189.360 150.149 139.503 1.00135.35 ATOM 119 O PHE E 17 189.222 151.165 138.810 1.00135.35 ATOM 120 CB PHE E 17 188.476 150.059 141.857 1.00135.35 ATOM 121 CG PHE E 17 187.615 149.302 142.822 1.00135.35 ATOM 122 CD1 PHE E 17 186.285 149.638 142.987 1.00135.35 ATOM 123 CD2 PHE E 17 188.127 148.241 143.541 1.00135.35 ATOM 124 CE1 PHE E 17 185.487 148.944 143.865 1.00135.35 ATOM 125 CE2 PHE E 17 187.334 147.540 144.419 1.00135.35 ATOM 126 CZ PHE E 17 186.011 147.894 144.581 1.00135.35 ATOM 127 N ASP E 18 190.487 149.434 139.492 1.00158.36 ATOM 128 CA ASP E 18 191.597 149.845 138.640 1.00158.36 ATOM 129 C ASP E 18 191.207 149.793 137.167 1.00158.36 ATOM 130 O ASP E 18 191.538 150.702 136.398 1.00158.36 ATOM 131 CB ASP E 18 192.828 148.975 138.913 1.00158.36 ATOM 132 CG ASP E 18 192.640 147.527 138.485 1.00158.36 ATOM 133 OD1 ASP E 18 191.488 147.110 138.255 1.00158.36 ATOM 134 OD2 ASP E 18 193.652 146.804 138.375 1.00158.36 ATOM 135 N LEU E 19 190.487 148.742 136.760 1.00160.21 ATOM 136 CA LEU E 19 190.119 148.601 135.355 1.00160.21 ATOM 137 C LEU E 19 189.113 149.665 134.935 1.00160.21 ATOM 138 O LEU E 19 189.227 150.235 133.844 1.00160.21 ATOM 139 CB LEU E 19 189.586 147.192 135.084 1.00160.21 ATOM 140 CG LEU E 19 188.334 146.638 135.769 1.00160.21 ATOM 141 CD1 LEU E 19 187.052 147.070 135.068 1.00160.21 ATOM 142 CD2 LEU E 19 188.413 145.122 135.847 1.00160.21 ATOM 143 N VAL E 20 188.130 149.962 135.786 1.00147.93 ATOM 144 CA VAL E 20 187.163 150.989 135.422 1.00147.93 ATOM 145 C VAL E 20 187.827 152.361 135.400 1.00147.93 ATOM 146 O VAL E 20 187.532 153.189 134.532 1.00147.93 ATOM 147 CB VAL E 20 185.937 150.950 136.354 1.00147.93 ATOM 148 CG1 VAL E 20 186.325 151.213 137.787 1.00147.93 ATOM 149 CG2 VAL E 20 184.898 151.959 135.891 1.00147.93 ATOM 150 N LEU E 21 188.761 152.614 136.321 1.00139.15 ATOM 151 CA LEU E 21 189.457 153.896 136.321 1.00139.15 ATOM 152 C LEU E 21 190.339 154.055 135.086 1.00139.15 ATOM 153 O LEU E 21 190.375 155.133 134.476 1.00139.15 ATOM 154 CB LEU E 21 190.277 154.035 137.602 1.00139.15 ATOM 155 CG LEU E 21 189.462 154.420 138.838 1.00139.15 ATOM 156 CD1 LEU E 21 190.362 154.732 140.019 1.00139.15 ATOM 157 CD2 LEU E 21 188.582 155.604 138.518 1.00139.15 ATOM 158 N VAL E 22 191.061 152.999 134.699 1.00149.69 ATOM 159 CA VAL E 22 191.927 153.105 133.530 1.00149.69 ATOM 160 C VAL E 22 191.092 153.228 132.261 1.00149.69 ATOM 161 O VAL E 22 191.447 153.974 131.340 1.00149.69 ATOM 162 CB VAL E 22 192.920 151.927 133.465 1.00149.69 ATOM 163 CG1 VAL E 22 192.214 150.607 133.260 1.00149.69 ATOM 164 CG2 VAL E 22 193.948 152.156 132.366 1.00149.69 ATOM 165 N ALA E 23 189.959 152.525 132.196 1.00146.50 ATOM 166 CA ALA E 23 189.053 152.714 131.071 1.00146.50 ATOM 167 C ALA E 23 188.524 154.140 131.038 1.00146.50 ATOM 168 O ALA E 23 188.360 154.725 129.962 1.00146.50 ATOM 169 CB ALA E 23 187.904 151.710 131.145 1.00146.50 ATOM 170 N ALA E 24 188.254 154.717 132.210 1.00144.83 ATOM 171 CA ALA E 24 187.778 156.093 132.270 1.00144.83 ATOM 172 C ALA E 24 188.818 157.059 131.722 1.00144.83 ATOM 173 O ALA E 24 188.500 157.942 130.917 1.00144.83 ATOM 174 CB ALA E 24 187.411 156.453 133.708 1.00144.83 ATOM 175 N ARG E 25 190.074 156.904 132.145 1.00149.23 ATOM 176 CA ARG E 25 191.101 157.825 131.669 1.00149.23 ATOM 177 C ARG E 25 191.467 157.572 130.214 1.00149.23 ATOM 178 O ARG E 25 191.972 158.483 129.552 1.00149.23 ATOM 179 CB ARG E 25 192.354 157.762 132.545 1.00149.23 ATOM 180 CG ARG E 25 192.971 156.393 132.692 1.00149.23 ATOM 181 CD ARG E 25 193.746 156.286 133.997 1.00149.23 ATOM 182 NE ARG E 25 192.924 156.657 135.143 1.00149.23 ATOM 183 CZ ARG E 25 193.291 156.510 136.408 1.00149.23 ATOM 184 NH1 ARG E 25 194.465 155.993 136.732 1.00149.23 ATOM 185 NH2 ARG E 25 192.458 156.889 137.374 1.00149.23 ATOM 186 N ARG E 26 191.227 156.364 129.699 1.00148.71 ATOM 187 CA ARG E 26 191.421 156.138 128.272 1.00148.71 ATOM 188 C ARG E 26 190.299 156.795 127.474 1.00148.71 ATOM 189 O ARG E 26 190.554 157.479 126.476 1.00148.71 ATOM 190 CB ARG E 26 191.486 154.633 127.990 1.00148.71 ATOM 191 CG ARG E 26 191.322 154.180 126.527 1.00148.71 ATOM 192 CD ARG E 26 192.071 155.059 125.526 1.00148.71 ATOM 193 NE ARG E 26 191.548 154.942 124.170 1.00148.71 ATOM 194 CZ ARG E 26 191.415 155.962 123.331 1.00148.71 ATOM 195 NH1 ARG E 26 191.759 157.191 123.677 1.00148.71 ATOM 196 NH2 ARG E 26 190.924 155.742 122.115 1.00148.71 ATOM 197 N ALA E 27 189.054 156.638 127.923 1.00147.46 ATOM 198 CA ALA E 27 187.916 157.159 127.179 1.00147.46 ATOM 199 C ALA E 27 187.750 158.663 127.336 1.00147.46 ATOM 200 O ALA E 27 187.041 159.278 126.533 1.00147.46 ATOM 201 CB ALA E 27 186.635 156.447 127.615 1.00147.46 ATOM 202 N ARG E 28 188.390 159.267 128.340 1.00141.41 ATOM 203 CA ARG E 28 188.335 160.718 128.491 1.00141.41 ATOM 204 C ARG E 28 188.901 161.435 127.272 1.00141.41 ATOM 205 O ARG E 28 188.579 162.605 127.035 1.00141.41 ATOM 206 CB ARG E 28 189.094 161.137 129.750 1.00141.41 ATOM 207 CG ARG E 28 188.677 162.478 130.332 1.00141.41 ATOM 208 CD ARG E 28 187.266 162.432 130.887 1.00141.41 ATOM 209 NE ARG E 28 186.315 163.050 129.974 1.00141.41 ATOM 210 CZ ARG E 28 185.002 163.056 130.151 1.00141.41 ATOM 211 NH1 ARG E 28 184.445 162.489 131.208 1.00141.41 ATOM 212 NH2 ARG E 28 184.229 163.649 129.246 1.00141.41 ATOM 213 N GLN E 29 189.741 160.760 126.494 1.00139.47 ATOM 214 CA GLN E 29 190.335 161.348 125.302 1.00139.47 ATOM 215 C GLN E 29 189.376 161.284 124.116 1.00139.47 ATOM 216 O GLN E 29 189.632 161.872 123.066 1.00139.47 ATOM 217 CB GLN E 29 191.644 160.637 124.962 1.00139.47 ATOM 218 CG GLN E 29 192.622 160.576 126.121 1.00139.47 ATOM 219 CD GLN E 29 193.798 159.668 125.839 1.00139.47 ATOM 220 OE1 GLN E 29 193.881 159.052 124.778 1.00139.47 ATOM 221 NE2 GLN E 29 194.717 159.579 126.792 1.00139.47 TER