HEADER TRANSCRIPTION 31-DEC-69 8ACP TITLE RNA polymerase at U-rich pause bound to regulatory RNA putL - TITLE 2 inactive, open clamp state COMPND MOL_ID: 4; COMPND 2 MOLECULE: DNA-directed RNA polymerase subunit omega; COMPND 3 CHAIN: E; COMPND 4 EC: 2.7.7.6; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 8ACP E 1 91 UNP P0A800 RPOZ_ECOLI 1 91 SEQRES 1 E 28 ALA ARG VAL THR VAL GLN ASP ALA VAL GLU LYS ILE GLY SEQRES 2 E 28 ASN ARG PHE ASP LEU VAL LEU VAL ALA ALA ARG ARG ALA SEQRES 3 E 28 ARG GLN ATOM 1 N ALA E 2 185.538 158.455 129.169 1.00223.44 ATOM 2 CA ALA E 2 186.788 157.771 128.863 1.00223.44 ATOM 3 C ALA E 2 186.629 156.260 129.001 1.00223.44 ATOM 4 O ALA E 2 185.659 155.683 128.509 1.00223.44 ATOM 5 CB ALA E 2 187.903 158.274 129.767 1.00223.44 ATOM 6 N ARG E 3 187.593 155.625 129.665 1.00226.82 ATOM 7 CA ARG E 3 187.524 154.188 129.889 1.00226.82 ATOM 8 C ARG E 3 186.320 153.850 130.760 1.00226.82 ATOM 9 O ARG E 3 186.042 154.524 131.755 1.00226.82 ATOM 10 CB ARG E 3 188.814 153.694 130.545 1.00226.82 ATOM 11 CG ARG E 3 188.770 152.247 131.003 1.00226.82 ATOM 12 CD ARG E 3 188.681 151.302 129.816 1.00226.82 ATOM 13 NE ARG E 3 189.288 150.008 130.103 1.00226.82 ATOM 14 CZ ARG E 3 189.376 149.011 129.233 1.00226.82 ATOM 15 NH1 ARG E 3 188.899 149.122 128.005 1.00226.82 ATOM 16 NH2 ARG E 3 189.960 147.876 129.605 1.00226.82 ATOM 17 N VAL E 4 185.603 152.796 130.380 1.00202.67 ATOM 18 CA VAL E 4 184.366 152.434 131.057 1.00202.67 ATOM 19 C VAL E 4 184.396 151.037 131.660 1.00202.67 ATOM 20 O VAL E 4 183.487 150.697 132.435 1.00202.67 ATOM 21 CB VAL E 4 183.159 152.573 130.107 1.00202.67 ATOM 22 CG1 VAL E 4 183.013 154.016 129.658 1.00202.67 ATOM 23 CG2 VAL E 4 183.321 151.647 128.911 1.00202.67 ATOM 24 N THR E 5 185.390 150.213 131.347 1.00225.00 ATOM 25 CA THR E 5 185.471 148.857 131.864 1.00225.00 ATOM 26 C THR E 5 186.822 148.638 132.531 1.00225.00 ATOM 27 O THR E 5 187.862 149.060 132.018 1.00225.00 ATOM 28 CB THR E 5 185.263 147.824 130.748 1.00225.00 ATOM 29 OG1 THR E 5 184.036 148.101 130.062 1.00225.00 ATOM 30 CG2 THR E 5 185.201 146.422 131.325 1.00225.00 ATOM 31 N VAL E 6 186.797 147.969 133.682 1.00232.76 ATOM 32 CA VAL E 6 188.010 147.705 134.446 1.00232.76 ATOM 33 C VAL E 6 188.310 146.211 134.427 1.00232.76 ATOM 34 O VAL E 6 188.930 145.678 135.356 1.00232.76 ATOM 35 CB VAL E 6 187.883 148.234 135.887 1.00232.76 ATOM 36 CG1 VAL E 6 187.712 149.744 135.877 1.00232.76 ATOM 37 CG2 VAL E 6 186.710 147.574 136.594 1.00232.76 ATOM 38 N GLN E 7 187.872 145.529 133.364 1.00234.46 ATOM 39 CA GLN E 7 188.189 144.112 133.208 1.00234.46 ATOM 40 C GLN E 7 189.696 143.888 133.207 1.00234.46 ATOM 41 O GLN E 7 190.184 142.889 133.748 1.00234.46 ATOM 42 CB GLN E 7 187.565 143.574 131.919 1.00234.46 ATOM 43 CG GLN E 7 188.024 142.171 131.534 1.00234.46 ATOM 44 CD GLN E 7 187.561 141.756 130.148 1.00234.46 ATOM 45 OE1 GLN E 7 186.828 142.484 129.480 1.00234.46 ATOM 46 NE2 GLN E 7 187.989 140.577 129.712 1.00234.46 ATOM 47 N ASP E 8 190.448 144.814 132.607 1.00263.96 ATOM 48 CA ASP E 8 191.903 144.722 132.642 1.00263.96 ATOM 49 C ASP E 8 192.429 144.814 134.069 1.00263.96 ATOM 50 O ASP E 8 193.360 144.092 134.442 1.00263.96 ATOM 51 CB ASP E 8 192.516 145.807 131.755 1.00263.96 ATOM 52 CG ASP E 8 192.190 147.216 132.228 1.00263.96 ATOM 53 OD1 ASP E 8 191.451 147.370 133.223 1.00263.96 ATOM 54 OD2 ASP E 8 192.677 148.176 131.596 1.00263.96 ATOM 55 N ALA E 9 191.848 145.701 134.881 1.00268.45 ATOM 56 CA ALA E 9 192.252 145.797 136.279 1.00268.45 ATOM 57 C ALA E 9 191.938 144.511 137.032 1.00268.45 ATOM 58 O ALA E 9 192.731 144.063 137.870 1.00268.45 ATOM 59 CB ALA E 9 191.568 146.991 136.943 1.00268.45 ATOM 60 N VAL E 10 190.782 143.906 136.750 1.00281.31 ATOM 61 CA VAL E 10 190.387 142.687 137.451 1.00281.31 ATOM 62 C VAL E 10 191.282 141.517 137.058 1.00281.31 ATOM 63 O VAL E 10 191.629 140.675 137.895 1.00281.31 ATOM 64 CB VAL E 10 188.901 142.376 137.191 1.00281.31 ATOM 65 CG1 VAL E 10 188.456 141.174 138.012 1.00281.31 ATOM 66 CG2 VAL E 10 188.043 143.584 137.519 1.00281.31 ATOM 67 N GLU E 11 191.669 141.434 135.783 1.00299.47 ATOM 68 CA GLU E 11 192.376 140.245 135.319 1.00299.47 ATOM 69 C GLU E 11 193.841 140.208 135.747 1.00299.47 ATOM 70 O GLU E 11 194.448 139.133 135.711 1.00299.47 ATOM 71 CB GLU E 11 192.268 140.125 133.794 1.00299.47 ATOM 72 CG GLU E 11 192.837 141.297 133.009 1.00299.47 ATOM 73 CD GLU E 11 194.328 141.178 132.752 1.00299.47 ATOM 74 OE1 GLU E 11 194.860 140.051 132.831 1.00299.47 ATOM 75 OE2 GLU E 11 194.969 142.214 132.477 1.00299.47 ATOM 76 N LYS E 12 194.426 141.334 136.151 1.00291.91 ATOM 77 CA LYS E 12 195.853 141.287 136.469 1.00291.91 ATOM 78 C LYS E 12 196.179 141.733 137.888 1.00291.91 ATOM 79 O LYS E 12 197.027 141.115 138.536 1.00291.91 ATOM 80 CB LYS E 12 196.649 142.140 135.458 1.00291.91 ATOM 81 CG LYS E 12 196.282 143.616 135.446 1.00291.91 ATOM 82 CD LYS E 12 196.989 144.372 134.333 1.00291.91 ATOM 83 CE LYS E 12 196.649 145.855 134.378 1.00291.91 ATOM 84 NZ LYS E 12 195.288 146.126 133.841 1.00291.91 ATOM 85 N ILE E 13 195.533 142.783 138.388 1.00277.57 ATOM 86 CA ILE E 13 195.798 143.282 139.732 1.00277.57 ATOM 87 C ILE E 13 194.465 143.233 140.476 1.00277.57 ATOM 88 O ILE E 13 194.175 144.068 141.340 1.00277.57 ATOM 89 CB ILE E 13 196.420 144.694 139.688 1.00277.57 ATOM 90 CG1 ILE E 13 197.719 144.667 138.884 1.00277.57 ATOM 91 CG2 ILE E 13 196.840 145.162 141.073 1.00277.57 ATOM 92 CD1 ILE E 13 198.781 143.760 139.469 1.00277.57 ATOM 93 N GLY E 14 193.637 142.251 140.129 1.00270.98 ATOM 94 CA GLY E 14 192.247 142.229 140.541 1.00270.98 ATOM 95 C GLY E 14 191.957 142.296 142.027 1.00270.98 ATOM 96 O GLY E 14 192.181 141.334 142.767 1.00270.98 ATOM 97 N ASN E 15 191.456 143.453 142.460 1.00240.62 ATOM 98 CA ASN E 15 190.848 143.642 143.772 1.00240.62 ATOM 99 C ASN E 15 190.136 144.988 143.769 1.00240.62 ATOM 100 O ASN E 15 190.692 145.986 143.303 1.00240.62 ATOM 101 CB ASN E 15 191.886 143.571 144.894 1.00240.62 ATOM 102 CG ASN E 15 191.254 143.593 146.278 1.00240.62 ATOM 103 OD1 ASN E 15 190.054 143.360 146.431 1.00240.62 ATOM 104 ND2 ASN E 15 192.063 143.875 147.292 1.00240.62 ATOM 105 N ARG E 16 188.914 145.031 144.291 1.00219.94 ATOM 106 CA ARG E 16 188.041 146.184 144.119 1.00219.94 ATOM 107 C ARG E 16 188.150 147.198 145.250 1.00219.94 ATOM 108 O ARG E 16 187.373 148.156 145.281 1.00219.94 ATOM 109 CB ARG E 16 186.593 145.720 143.965 1.00219.94 ATOM 110 CG ARG E 16 186.129 145.617 142.520 1.00219.94 ATOM 111 CD ARG E 16 187.011 144.682 141.713 1.00219.94 ATOM 112 NE ARG E 16 186.392 144.317 140.445 1.00219.94 ATOM 113 CZ ARG E 16 185.740 143.183 140.235 1.00219.94 ATOM 114 NH1 ARG E 16 185.632 142.265 141.180 1.00219.94 ATOM 115 NH2 ARG E 16 185.187 142.963 139.046 1.00219.94 ATOM 116 N PHE E 17 189.079 147.009 146.183 1.00218.44 ATOM 117 CA PHE E 17 189.262 147.949 147.283 1.00218.44 ATOM 118 C PHE E 17 190.649 148.571 147.297 1.00218.44 ATOM 119 O PHE E 17 190.775 149.802 147.390 1.00218.44 ATOM 120 CB PHE E 17 188.985 147.244 148.619 1.00218.44 ATOM 121 CG PHE E 17 187.754 146.384 148.603 1.00218.44 ATOM 122 CD1 PHE E 17 186.506 146.928 148.853 1.00218.44 ATOM 123 CD2 PHE E 17 187.846 145.027 148.342 1.00218.44 ATOM 124 CE1 PHE E 17 185.373 146.138 148.840 1.00218.44 ATOM 125 CE2 PHE E 17 186.717 144.232 148.328 1.00218.44 ATOM 126 CZ PHE E 17 185.478 144.788 148.578 1.00218.44 ATOM 127 N ASP E 18 191.698 147.746 147.227 1.00243.36 ATOM 128 CA ASP E 18 193.058 148.273 147.254 1.00243.36 ATOM 129 C ASP E 18 193.327 149.163 146.049 1.00243.36 ATOM 130 O ASP E 18 193.956 150.219 146.179 1.00243.36 ATOM 131 CB ASP E 18 194.068 147.124 147.321 1.00243.36 ATOM 132 CG ASP E 18 194.048 146.248 146.083 1.00243.36 ATOM 133 OD1 ASP E 18 193.092 146.363 145.289 1.00243.36 ATOM 134 OD2 ASP E 18 194.989 145.446 145.903 1.00243.36 ATOM 135 N LEU E 19 192.864 148.749 144.867 1.00239.25 ATOM 136 CA LEU E 19 193.050 149.569 143.676 1.00239.25 ATOM 137 C LEU E 19 192.360 150.915 143.827 1.00239.25 ATOM 138 O LEU E 19 192.934 151.957 143.491 1.00239.25 ATOM 139 CB LEU E 19 192.529 148.832 142.443 1.00239.25 ATOM 140 CG LEU E 19 193.282 147.565 142.046 1.00239.25 ATOM 141 CD1 LEU E 19 192.579 146.858 140.895 1.00239.25 ATOM 142 CD2 LEU E 19 194.700 147.932 141.664 1.00239.25 ATOM 143 N VAL E 20 191.133 150.914 144.352 1.00224.15 ATOM 144 CA VAL E 20 190.407 152.166 144.531 1.00224.15 ATOM 145 C VAL E 20 191.147 153.078 145.499 1.00224.15 ATOM 146 O VAL E 20 191.316 154.275 145.237 1.00224.15 ATOM 147 CB VAL E 20 188.967 151.889 144.999 1.00224.15 ATOM 148 CG1 VAL E 20 188.186 153.188 145.109 1.00224.15 ATOM 149 CG2 VAL E 20 188.281 150.947 144.039 1.00224.15 ATOM 150 N LEU E 21 191.619 152.530 146.622 1.00233.81 ATOM 151 CA LEU E 21 192.258 153.383 147.622 1.00233.81 ATOM 152 C LEU E 21 193.600 153.917 147.125 1.00233.81 ATOM 153 O LEU E 21 193.930 155.089 147.347 1.00233.81 ATOM 154 CB LEU E 21 192.406 152.635 148.952 1.00233.81 ATOM 155 CG LEU E 21 193.317 151.417 149.122 1.00233.81 ATOM 156 CD1 LEU E 21 194.736 151.822 149.494 1.00233.81 ATOM 157 CD2 LEU E 21 192.743 150.477 150.170 1.00233.81 ATOM 158 N VAL E 22 194.388 153.080 146.439 1.00237.37 ATOM 159 CA VAL E 22 195.676 153.559 145.943 1.00237.37 ATOM 160 C VAL E 22 195.474 154.579 144.828 1.00237.37 ATOM 161 O VAL E 22 196.200 155.576 144.748 1.00237.37 ATOM 162 CB VAL E 22 196.584 152.394 145.494 1.00237.37 ATOM 163 CG1 VAL E 22 196.902 151.471 146.663 1.00237.37 ATOM 164 CG2 VAL E 22 195.981 151.623 144.332 1.00237.37 ATOM 165 N ALA E 23 194.478 154.365 143.962 1.00232.26 ATOM 166 CA ALA E 23 194.189 155.347 142.923 1.00232.26 ATOM 167 C ALA E 23 193.737 156.666 143.531 1.00232.26 ATOM 168 O ALA E 23 194.111 157.740 143.048 1.00232.26 ATOM 169 CB ALA E 23 193.130 154.803 141.965 1.00232.26 ATOM 170 N ALA E 24 192.932 156.603 144.593 1.00221.25 ATOM 171 CA ALA E 24 192.488 157.822 145.261 1.00221.25 ATOM 172 C ALA E 24 193.663 158.576 145.867 1.00221.25 ATOM 173 O ALA E 24 193.812 159.787 145.664 1.00221.25 ATOM 174 CB ALA E 24 191.456 157.478 146.332 1.00221.25 ATOM 175 N ARG E 25 194.517 157.874 146.610 1.00230.73 ATOM 176 CA ARG E 25 195.650 158.527 147.251 1.00230.73 ATOM 177 C ARG E 25 196.752 158.899 146.267 1.00230.73 ATOM 178 O ARG E 25 197.668 159.638 146.642 1.00230.73 ATOM 179 CB ARG E 25 196.209 157.638 148.364 1.00230.73 ATOM 180 CG ARG E 25 196.866 156.359 147.889 1.00230.73 ATOM 181 CD ARG E 25 197.373 155.552 149.070 1.00230.73 ATOM 182 NE ARG E 25 196.278 155.094 149.917 1.00230.73 ATOM 183 CZ ARG E 25 196.011 155.574 151.124 1.00230.73 ATOM 184 NH1 ARG E 25 196.746 156.531 151.665 1.00230.73 ATOM 185 NH2 ARG E 25 194.979 155.083 151.804 1.00230.73 ATOM 186 N ARG E 26 196.690 158.406 145.029 1.00232.56 ATOM 187 CA ARG E 26 197.614 158.864 143.998 1.00232.56 ATOM 188 C ARG E 26 197.073 160.098 143.283 1.00232.56 ATOM 189 O ARG E 26 197.812 161.058 143.039 1.00232.56 ATOM 190 CB ARG E 26 197.884 157.741 142.993 1.00232.56 ATOM 191 CG ARG E 26 199.103 156.869 143.294 1.00232.56 ATOM 192 CD ARG E 26 199.352 156.692 144.784 1.00232.56 ATOM 193 NE ARG E 26 200.336 155.648 145.047 1.00232.56 ATOM 194 CZ ARG E 26 200.860 155.393 146.238 1.00232.56 ATOM 195 NH1 ARG E 26 200.519 156.094 147.307 1.00232.56 ATOM 196 NH2 ARG E 26 201.748 154.411 146.359 1.00232.56 ATOM 197 N ALA E 27 195.782 160.088 142.940 1.00227.31 ATOM 198 CA ALA E 27 195.179 161.214 142.240 1.00227.31 ATOM 199 C ALA E 27 194.875 162.381 143.168 1.00227.31 ATOM 200 O ALA E 27 194.532 163.465 142.683 1.00227.31 ATOM 201 CB ALA E 27 193.900 160.768 141.530 1.00227.31 ATOM 202 N ARG E 28 194.978 162.182 144.485 1.00211.16 ATOM 203 CA ARG E 28 194.808 163.294 145.415 1.00211.16 ATOM 204 C ARG E 28 195.802 164.413 145.129 1.00211.16 ATOM 205 O ARG E 28 195.516 165.589 145.385 1.00211.16 ATOM 206 CB ARG E 28 194.961 162.796 146.852 1.00211.16 ATOM 207 CG ARG E 28 194.376 163.721 147.905 1.00211.16 ATOM 208 CD ARG E 28 192.906 164.000 147.646 1.00211.16 ATOM 209 NE ARG E 28 192.694 165.309 147.042 1.00211.16 ATOM 210 CZ ARG E 28 191.513 165.771 146.654 1.00211.16 ATOM 211 NH1 ARG E 28 190.411 165.054 146.796 1.00211.16 ATOM 212 NH2 ARG E 28 191.437 166.983 146.111 1.00211.16 ATOM 213 N GLN E 29 196.970 164.069 144.596 1.00217.26 ATOM 214 CA GLN E 29 197.995 165.056 144.285 1.00217.26 ATOM 215 C GLN E 29 197.704 165.744 142.955 1.00217.26 ATOM 216 O GLN E 29 197.494 166.956 142.904 1.00217.26 ATOM 217 CB GLN E 29 199.377 164.400 144.249 1.00217.26 ATOM 218 CG GLN E 29 199.955 164.073 145.620 1.00217.26 ATOM 219 CD GLN E 29 199.227 162.934 146.307 1.00217.26 ATOM 220 OE1 GLN E 29 198.560 162.127 145.659 1.00217.26 ATOM 221 NE2 GLN E 29 199.351 162.862 147.627 1.00217.26 TER