HEADER RIBOSOME 31-DEC-69 8CDL TITLE 80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation TITLE 2 (PRE-H2) complex COMPND MOL_ID: 57; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: Z; EXPDTA ELECTRON MICROSCOPY DBREF 8CDL Z 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 Z 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 Z 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET Z 1 175.268 187.272 237.081 1.00 55.79 ATOM 2 CA MET Z 1 176.289 188.309 237.157 1.00 55.79 ATOM 3 C MET Z 1 175.956 189.302 238.260 1.00 55.79 ATOM 4 O MET Z 1 174.808 189.724 238.396 1.00 55.79 ATOM 5 CB MET Z 1 176.424 189.031 235.818 1.00 55.79 ATOM 6 CG MET Z 1 177.522 190.075 235.783 1.00 55.79 ATOM 7 SD MET Z 1 177.699 190.830 234.159 1.00 55.79 ATOM 8 CE MET Z 1 178.963 192.047 234.496 1.00 55.79 ATOM 9 N ARG Z 2 176.967 189.661 239.047 1.00 51.91 ATOM 10 CA ARG Z 2 176.776 190.600 240.144 1.00 51.91 ATOM 11 C ARG Z 2 176.212 191.920 239.635 1.00 51.91 ATOM 12 O ARG Z 2 176.653 192.450 238.612 1.00 51.91 ATOM 13 CB ARG Z 2 178.096 190.838 240.868 1.00 51.91 ATOM 14 CG ARG Z 2 177.941 191.547 242.189 1.00 51.91 ATOM 15 CD ARG Z 2 179.272 191.696 242.885 1.00 51.91 ATOM 16 NE ARG Z 2 179.193 192.658 243.973 1.00 51.91 ATOM 17 CZ ARG Z 2 180.190 192.938 244.799 1.00 51.91 ATOM 18 NH1 ARG Z 2 181.367 192.348 244.687 1.00 51.91 ATOM 19 NH2 ARG Z 2 179.998 193.832 245.762 1.00 51.91 ATOM 20 N ALA Z 3 175.215 192.443 240.354 1.00 52.25 ATOM 21 CA ALA Z 3 174.539 193.658 239.913 1.00 52.25 ATOM 22 C ALA Z 3 175.477 194.855 239.878 1.00 52.25 ATOM 23 O ALA Z 3 175.326 195.729 239.020 1.00 52.25 ATOM 24 CB ALA Z 3 173.342 193.949 240.817 1.00 52.25 ATOM 25 N LYS Z 4 176.445 194.920 240.794 1.00 51.53 ATOM 26 CA LYS Z 4 177.407 196.019 240.783 1.00 51.53 ATOM 27 C LYS Z 4 178.220 196.026 239.492 1.00 51.53 ATOM 28 O LYS Z 4 178.387 197.071 238.848 1.00 51.53 ATOM 29 CB LYS Z 4 178.323 195.915 242.002 1.00 51.53 ATOM 30 CG LYS Z 4 179.296 197.064 242.156 1.00 51.53 ATOM 31 CD LYS Z 4 180.358 196.746 243.189 1.00 51.53 ATOM 32 CE LYS Z 4 179.844 196.966 244.593 1.00 51.53 ATOM 33 NZ LYS Z 4 179.753 198.409 244.918 1.00 51.53 ATOM 34 N TRP Z 5 178.724 194.859 239.088 1.00 52.84 ATOM 35 CA TRP Z 5 179.507 194.790 237.862 1.00 52.84 ATOM 36 C TRP Z 5 178.630 194.936 236.627 1.00 52.84 ATOM 37 O TRP Z 5 179.091 195.448 235.602 1.00 52.84 ATOM 38 CB TRP Z 5 180.299 193.486 237.815 1.00 52.84 ATOM 39 CG TRP Z 5 181.059 193.174 239.078 1.00 52.84 ATOM 40 CD1 TRP Z 5 181.179 191.954 239.671 1.00 52.84 ATOM 41 CD2 TRP Z 5 181.813 194.087 239.892 1.00 52.84 ATOM 42 NE1 TRP Z 5 181.950 192.046 240.801 1.00 52.84 ATOM 43 CE2 TRP Z 5 182.352 193.345 240.959 1.00 52.84 ATOM 44 CE3 TRP Z 5 182.084 195.458 239.822 1.00 52.84 ATOM 45 CZ2 TRP Z 5 183.139 193.925 241.947 1.00 52.84 ATOM 46 CZ3 TRP Z 5 182.863 196.030 240.804 1.00 52.84 ATOM 47 CH2 TRP Z 5 183.382 195.266 241.852 1.00 52.84 ATOM 48 N ARG Z 6 177.367 194.518 236.704 1.00 55.02 ATOM 49 CA ARG Z 6 176.442 194.787 235.609 1.00 55.02 ATOM 50 C ARG Z 6 176.211 196.284 235.452 1.00 55.02 ATOM 51 O ARG Z 6 176.154 196.799 234.330 1.00 55.02 ATOM 52 CB ARG Z 6 175.122 194.058 235.848 1.00 55.02 ATOM 53 CG ARG Z 6 174.284 193.874 234.600 1.00 55.02 ATOM 54 CD ARG Z 6 172.935 193.260 234.931 1.00 55.02 ATOM 55 NE ARG Z 6 173.028 191.823 235.159 1.00 55.02 ATOM 56 CZ ARG Z 6 173.273 190.923 234.217 1.00 55.02 ATOM 57 NH1 ARG Z 6 173.431 191.270 232.950 1.00 55.02 ATOM 58 NH2 ARG Z 6 173.359 189.639 234.554 1.00 55.02 ATOM 59 N LYS Z 7 176.076 196.996 236.572 1.00 54.42 ATOM 60 CA LYS Z 7 175.961 198.450 236.544 1.00 54.42 ATOM 61 C LYS Z 7 177.204 199.089 235.942 1.00 54.42 ATOM 62 O LYS Z 7 177.106 200.029 235.146 1.00 54.42 ATOM 63 CB LYS Z 7 175.724 198.965 237.963 1.00 54.42 ATOM 64 CG LYS Z 7 175.227 200.390 238.073 1.00 54.42 ATOM 65 CD LYS Z 7 175.156 200.795 239.537 1.00 54.42 ATOM 66 CE LYS Z 7 174.236 201.979 239.760 1.00 54.42 ATOM 67 NZ LYS Z 7 174.595 202.724 240.998 1.00 54.42 ATOM 68 N LYS Z 8 178.385 198.597 236.322 1.00 55.09 ATOM 69 CA LYS Z 8 179.625 199.128 235.761 1.00 55.09 ATOM 70 C LYS Z 8 179.699 198.891 234.255 1.00 55.09 ATOM 71 O LYS Z 8 180.100 199.781 233.493 1.00 55.09 ATOM 72 CB LYS Z 8 180.826 198.497 236.465 1.00 55.09 ATOM 73 CG LYS Z 8 182.169 199.031 236.009 1.00 55.09 ATOM 74 CD LYS Z 8 183.304 198.174 236.533 1.00 55.09 ATOM 75 CE LYS Z 8 183.953 198.806 237.747 1.00 55.09 ATOM 76 NZ LYS Z 8 184.478 200.161 237.442 1.00 55.09 ATOM 77 N ARG Z 9 179.313 197.694 233.811 1.00 55.00 ATOM 78 CA ARG Z 9 179.300 197.390 232.384 1.00 55.00 ATOM 79 C ARG Z 9 178.317 198.283 231.639 1.00 55.00 ATOM 80 O ARG Z 9 178.611 198.762 230.537 1.00 55.00 ATOM 81 CB ARG Z 9 178.953 195.917 232.178 1.00 55.00 ATOM 82 CG ARG Z 9 178.667 195.529 230.745 1.00 55.00 ATOM 83 CD ARG Z 9 178.251 194.075 230.658 1.00 55.00 ATOM 84 NE ARG Z 9 179.386 193.175 230.820 1.00 55.00 ATOM 85 CZ ARG Z 9 179.326 191.860 230.670 1.00 55.00 ATOM 86 NH1 ARG Z 9 178.196 191.252 230.350 1.00 55.00 ATOM 87 NH2 ARG Z 9 180.428 191.137 230.841 1.00 55.00 ATOM 88 N THR Z 10 177.142 198.515 232.224 1.00 55.85 ATOM 89 CA THR Z 10 176.158 199.387 231.594 1.00 55.85 ATOM 90 C THR Z 10 176.665 200.821 231.515 1.00 55.85 ATOM 91 O THR Z 10 176.415 201.518 230.527 1.00 55.85 ATOM 92 CB THR Z 10 174.838 199.319 232.358 1.00 55.85 ATOM 93 OG1 THR Z 10 174.450 197.950 232.515 1.00 55.85 ATOM 94 CG2 THR Z 10 173.752 200.051 231.601 1.00 55.85 ATOM 95 N ARG Z 11 177.379 201.278 232.545 1.00 56.31 ATOM 96 CA ARG Z 11 177.980 202.607 232.498 1.00 56.31 ATOM 97 C ARG Z 11 179.018 202.705 231.387 1.00 56.31 ATOM 98 O ARG Z 11 179.084 203.714 230.671 1.00 56.31 ATOM 99 CB ARG Z 11 178.611 202.941 233.848 1.00 56.31 ATOM 100 CG ARG Z 11 177.622 203.349 234.920 1.00 56.31 ATOM 101 CD ARG Z 11 178.324 204.096 236.036 1.00 56.31 ATOM 102 NE ARG Z 11 177.384 204.738 236.945 1.00 56.31 ATOM 103 CZ ARG Z 11 177.289 204.463 238.238 1.00 56.31 ATOM 104 NH1 ARG Z 11 178.062 203.555 238.810 1.00 56.31 ATOM 105 NH2 ARG Z 11 176.398 205.117 238.976 1.00 56.31 ATOM 106 N ARG Z 12 179.851 201.671 231.240 1.00 57.19 ATOM 107 CA ARG Z 12 180.824 201.660 230.151 1.00 57.19 ATOM 108 C ARG Z 12 180.131 201.709 228.797 1.00 57.19 ATOM 109 O ARG Z 12 180.545 202.457 227.902 1.00 57.19 ATOM 110 CB ARG Z 12 181.709 200.419 230.243 1.00 57.19 ATOM 111 CG ARG Z 12 182.636 200.387 231.439 1.00 57.19 ATOM 112 CD ARG Z 12 183.040 198.960 231.759 1.00 57.19 ATOM 113 NE ARG Z 12 184.309 198.892 232.473 1.00 57.19 ATOM 114 CZ ARG Z 12 184.782 197.798 233.053 1.00 57.19 ATOM 115 NH1 ARG Z 12 184.113 196.657 233.027 1.00 57.19 ATOM 116 NH2 ARG Z 12 185.956 197.849 233.675 1.00 57.19 ATOM 117 N LEU Z 13 179.076 200.909 228.627 1.00 57.28 ATOM 118 CA LEU Z 13 178.326 200.926 227.377 1.00 57.28 ATOM 119 C LEU Z 13 177.712 202.293 227.120 1.00 57.28 ATOM 120 O LEU Z 13 177.669 202.754 225.977 1.00 57.28 ATOM 121 CB LEU Z 13 177.240 199.851 227.389 1.00 57.28 ATOM 122 CG LEU Z 13 177.700 198.396 227.415 1.00 57.28 ATOM 123 CD1 LEU Z 13 176.506 197.471 227.565 1.00 57.28 ATOM 124 CD2 LEU Z 13 178.490 198.059 226.163 1.00 57.28 ATOM 125 N LYS Z 14 177.214 202.949 228.170 1.00 57.14 ATOM 126 CA LYS Z 14 176.623 204.273 228.003 1.00 57.14 ATOM 127 C LYS Z 14 177.663 205.294 227.564 1.00 57.14 ATOM 128 O LYS Z 14 177.397 206.115 226.679 1.00 57.14 ATOM 129 CB LYS Z 14 175.947 204.713 229.300 1.00 57.14 ATOM 130 CG LYS Z 14 174.953 205.846 229.126 1.00 57.14 ATOM 131 CD LYS Z 14 174.115 206.046 230.376 1.00 57.14 ATOM 132 CE LYS Z 14 173.163 207.215 230.214 1.00 57.14 ATOM 133 NZ LYS Z 14 172.287 207.394 231.402 1.00 57.14 ATOM 134 N ARG Z 15 178.856 205.264 228.168 1.00 59.26 ATOM 135 CA ARG Z 15 179.907 206.176 227.719 1.00 59.26 ATOM 136 C ARG Z 15 180.306 205.895 226.277 1.00 59.26 ATOM 137 O ARG Z 15 180.508 206.827 225.490 1.00 59.26 ATOM 138 CB ARG Z 15 181.138 206.109 228.624 1.00 59.26 ATOM 139 CG ARG Z 15 180.924 206.617 230.028 1.00 59.26 ATOM 140 CD ARG Z 15 182.197 206.497 230.849 1.00 59.26 ATOM 141 NE ARG Z 15 182.583 205.116 231.110 1.00 59.26 ATOM 142 CZ ARG Z 15 183.723 204.759 231.686 1.00 59.26 ATOM 143 NH1 ARG Z 15 184.615 205.658 232.067 1.00 59.26 ATOM 144 NH2 ARG Z 15 183.973 203.469 231.885 1.00 59.26 ATOM 145 N LYS Z 16 180.437 204.617 225.913 1.00 59.20 ATOM 146 CA LYS Z 16 180.799 204.280 224.540 1.00 59.20 ATOM 147 C LYS Z 16 179.732 204.750 223.558 1.00 59.20 ATOM 148 O LYS Z 16 180.049 205.308 222.499 1.00 59.20 ATOM 149 CB LYS Z 16 181.021 202.773 224.419 1.00 59.20 ATOM 150 CG LYS Z 16 181.317 202.286 223.013 1.00 59.20 ATOM 151 CD LYS Z 16 180.895 200.836 222.838 1.00 59.20 ATOM 152 CE LYS Z 16 181.582 200.197 221.644 1.00 59.20 ATOM 153 NZ LYS Z 16 181.512 198.711 221.690 1.00 59.20 ATOM 154 N ARG Z 17 178.460 204.543 223.901 1.00 58.63 ATOM 155 CA ARG Z 17 177.367 204.980 223.044 1.00 58.63 ATOM 156 C ARG Z 17 177.361 206.493 222.892 1.00 58.63 ATOM 157 O ARG Z 17 177.161 207.011 221.790 1.00 58.63 ATOM 158 CB ARG Z 17 176.035 204.495 223.613 1.00 58.63 ATOM 159 CG ARG Z 17 175.036 204.043 222.573 1.00 58.63 ATOM 160 CD ARG Z 17 173.714 203.668 223.215 1.00 58.63 ATOM 161 NE ARG Z 17 173.682 202.269 223.623 1.00 58.63 ATOM 162 CZ ARG Z 17 173.653 201.855 224.882 1.00 58.63 ATOM 163 NH1 ARG Z 17 173.649 202.710 225.891 1.00 58.63 ATOM 164 NH2 ARG Z 17 173.627 200.550 225.135 1.00 58.63 ATOM 165 N ARG Z 18 177.577 207.219 223.992 1.00 59.60 ATOM 166 CA ARG Z 18 177.626 208.674 223.913 1.00 59.60 ATOM 167 C ARG Z 18 178.787 209.140 223.046 1.00 59.60 ATOM 168 O ARG Z 18 178.646 210.088 222.266 1.00 59.60 ATOM 169 CB ARG Z 18 177.734 209.274 225.313 1.00 59.60 ATOM 170 CG ARG Z 18 177.310 210.729 225.386 1.00 59.60 ATOM 171 CD ARG Z 18 177.582 211.321 226.753 1.00 59.60 ATOM 172 NE ARG Z 18 179.006 211.539 226.965 1.00 59.60 ATOM 173 CZ ARG Z 18 179.707 211.013 227.959 1.00 59.60 ATOM 174 NH1 ARG Z 18 179.138 210.247 228.876 1.00 59.60 ATOM 175 NH2 ARG Z 18 181.010 211.263 228.037 1.00 59.60 ATOM 176 N LYS Z 19 179.950 208.497 223.180 1.00 58.98 ATOM 177 CA LYS Z 19 181.103 208.883 222.372 1.00 58.98 ATOM 178 C LYS Z 19 180.853 208.645 220.886 1.00 58.98 ATOM 179 O LYS Z 19 181.205 209.484 220.051 1.00 58.98 ATOM 180 CB LYS Z 19 182.350 208.133 222.837 1.00 58.98 ATOM 181 CG LYS Z 19 183.603 208.529 222.078 1.00 58.98 ATOM 182 CD LYS Z 19 184.842 207.857 222.630 1.00 58.98 ATOM 183 CE LYS Z 19 186.049 208.155 221.756 1.00 58.98 ATOM 184 NZ LYS Z 19 186.410 209.599 221.787 1.00 58.98 ATOM 185 N VAL Z 20 180.258 207.503 220.533 1.00 58.89 ATOM 186 CA VAL Z 20 179.934 207.252 219.128 1.00 58.89 ATOM 187 C VAL Z 20 178.885 208.243 218.632 1.00 58.89 ATOM 188 O VAL Z 20 178.947 208.719 217.490 1.00 58.89 ATOM 189 CB VAL Z 20 179.480 205.795 218.926 1.00 58.89 ATOM 190 CG1 VAL Z 20 179.259 205.514 217.453 1.00 58.89 ATOM 191 CG2 VAL Z 20 180.517 204.840 219.479 1.00 58.89 ATOM 192 N ARG Z 21 177.906 208.565 219.480 1.00 59.22 ATOM 193 CA ARG Z 21 176.905 209.569 219.138 1.00 59.22 ATOM 194 C ARG Z 21 177.554 210.913 218.841 1.00 59.22 ATOM 195 O ARG Z 21 177.152 211.612 217.907 1.00 59.22 ATOM 196 CB ARG Z 21 175.907 209.698 220.287 1.00 59.22 ATOM 197 CG ARG Z 21 174.805 210.723 220.092 1.00 59.22 ATOM 198 CD ARG Z 21 173.843 210.338 218.990 1.00 59.22 ATOM 199 NE ARG Z 21 172.803 211.346 218.828 1.00 59.22 ATOM 200 CZ ARG Z 21 171.651 211.342 219.486 1.00 59.22 ATOM 201 NH1 ARG Z 21 171.367 210.406 220.375 1.00 59.22 ATOM 202 NH2 ARG Z 21 170.766 212.306 219.251 1.00 59.22 ATOM 203 N ALA Z 22 178.545 211.301 219.646 1.00 59.81 ATOM 204 CA ALA Z 22 179.228 212.572 219.429 1.00 59.81 ATOM 205 C ALA Z 22 180.106 212.530 218.184 1.00 59.81 ATOM 206 O ALA Z 22 180.217 213.530 217.465 1.00 59.81 ATOM 207 CB ALA Z 22 180.056 212.938 220.659 1.00 59.81 ATOM 208 N ARG Z 23 180.754 211.391 217.920 1.00 57.30 ATOM 209 CA ARG Z 23 181.542 211.261 216.697 1.00 57.30 ATOM 210 C ARG Z 23 180.662 211.419 215.467 1.00 57.30 ATOM 211 O ARG Z 23 181.036 212.104 214.509 1.00 57.30 ATOM 212 CB ARG Z 23 182.266 209.914 216.666 1.00 57.30 ATOM 213 CG ARG Z 23 182.979 209.626 215.348 1.00 57.30 ATOM 214 CD ARG Z 23 183.825 208.363 215.432 1.00 57.30 ATOM 215 NE ARG Z 23 184.521 208.053 214.187 1.00 57.30 ATOM 216 CZ ARG Z 23 185.613 208.673 213.757 1.00 57.30 ATOM 217 NH1 ARG Z 23 186.137 209.690 214.422 1.00 57.30 ATOM 218 NH2 ARG Z 23 186.197 208.259 212.633 1.00 57.30 ATOM 219 N SER Z 24 179.487 210.798 215.479 1.00 62.08 ATOM 220 CA SER Z 24 178.493 211.100 214.464 1.00 62.08 ATOM 221 C SER Z 24 177.896 212.478 214.730 1.00 62.08 ATOM 222 O SER Z 24 177.991 213.019 215.832 1.00 62.08 ATOM 223 CB SER Z 24 177.394 210.039 214.449 1.00 62.08 ATOM 224 OG SER Z 24 177.927 208.762 214.142 1.00 62.08 ATOM 225 N LYS Z 25 177.283 213.053 213.703 1.00 64.93 ATOM 226 CA LYS Z 25 176.707 214.386 213.840 1.00 64.93 ATOM 227 C LYS Z 25 175.456 214.548 212.987 1.00 64.93 ATOM 228 O LYS Z 25 175.068 215.666 212.647 1.00 64.93 ATOM 229 CB LYS Z 25 177.737 215.455 213.465 1.00 64.93 ATOM 230 CG LYS Z 25 178.667 215.858 214.601 1.00 64.93 ATOM 231 CD LYS Z 25 177.901 216.109 215.890 1.00 64.93 ATOM 232 CE LYS Z 25 178.842 216.501 217.016 1.00 64.93 ATOM 233 NZ LYS Z 25 178.171 216.468 218.345 1.00 64.93 TER