HEADER RIBOSOME 31-DEC-69 8CIV TITLE Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome TITLE 2 with ligands and eEF2 in the presence of sordarin COMPND MOL_ID: 58; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: Z; EXPDTA ELECTRON MICROSCOPY DBREF 8CIV Z 1 25 UNP A0A8H8UM A0A8H8UMB4_ 1 25 SEQRES 1 Z 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 Z 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET Z 1 274.381 282.600 225.086 1.00 35.94 ATOM 2 CA MET Z 1 275.299 281.898 225.970 1.00 35.94 ATOM 3 C MET Z 1 276.270 281.011 225.207 1.00 35.94 ATOM 4 O MET Z 1 275.931 280.459 224.164 1.00 35.94 ATOM 5 CB MET Z 1 274.526 281.050 226.978 1.00 35.94 ATOM 6 CG MET Z 1 275.280 280.800 228.264 1.00 35.94 ATOM 7 SD MET Z 1 274.313 279.891 229.472 1.00 35.94 ATOM 8 CE MET Z 1 275.490 279.807 230.810 1.00 35.94 ATOM 9 N ARG Z 2 277.484 280.893 225.735 1.00 32.80 ATOM 10 CA ARG Z 2 278.444 279.939 225.201 1.00 32.80 ATOM 11 C ARG Z 2 277.890 278.527 225.287 1.00 32.80 ATOM 12 O ARG Z 2 277.238 278.159 226.266 1.00 32.80 ATOM 13 CB ARG Z 2 279.755 280.028 225.971 1.00 32.80 ATOM 14 CG ARG Z 2 280.990 279.943 225.115 1.00 32.80 ATOM 15 CD ARG Z 2 282.225 280.041 225.973 1.00 32.80 ATOM 16 NE ARG Z 2 283.256 279.103 225.558 1.00 32.80 ATOM 17 CZ ARG Z 2 284.524 279.183 225.929 1.00 32.80 ATOM 18 NH1 ARG Z 2 284.948 280.140 226.735 1.00 32.80 ATOM 19 NH2 ARG Z 2 285.389 278.285 225.475 1.00 32.80 ATOM 20 N ALA Z 3 278.146 277.731 224.249 1.00 32.64 ATOM 21 CA ALA Z 3 277.703 276.343 224.271 1.00 32.64 ATOM 22 C ALA Z 3 278.383 275.572 225.392 1.00 32.64 ATOM 23 O ALA Z 3 277.752 274.749 226.061 1.00 32.64 ATOM 24 CB ALA Z 3 277.970 275.682 222.921 1.00 32.64 ATOM 25 N LYS Z 4 279.671 275.837 225.618 1.00 32.64 ATOM 26 CA LYS Z 4 280.405 275.157 226.680 1.00 32.64 ATOM 27 C LYS Z 4 279.830 275.482 228.052 1.00 32.64 ATOM 28 O LYS Z 4 279.676 274.592 228.897 1.00 32.64 ATOM 29 CB LYS Z 4 281.880 275.538 226.607 1.00 32.64 ATOM 30 CG LYS Z 4 282.722 275.065 227.757 1.00 32.64 ATOM 31 CD LYS Z 4 284.084 275.713 227.701 1.00 32.64 ATOM 32 CE LYS Z 4 285.088 274.839 226.990 1.00 32.64 ATOM 33 NZ LYS Z 4 286.430 275.005 227.593 1.00 32.64 ATOM 34 N TRP Z 5 279.492 276.748 228.295 1.00 33.75 ATOM 35 CA TRP Z 5 278.957 277.107 229.601 1.00 33.75 ATOM 36 C TRP Z 5 277.506 276.679 229.767 1.00 33.75 ATOM 37 O TRP Z 5 277.091 276.347 230.881 1.00 33.75 ATOM 38 CB TRP Z 5 279.101 278.608 229.840 1.00 33.75 ATOM 39 CG TRP Z 5 280.518 279.132 229.792 1.00 33.75 ATOM 40 CD1 TRP Z 5 280.901 280.371 229.391 1.00 33.75 ATOM 41 CD2 TRP Z 5 281.727 278.443 230.163 1.00 33.75 ATOM 42 NE1 TRP Z 5 282.259 280.505 229.481 1.00 33.75 ATOM 43 CE2 TRP Z 5 282.791 279.335 229.951 1.00 33.75 ATOM 44 CE3 TRP Z 5 282.012 277.162 230.650 1.00 33.75 ATOM 45 CZ2 TRP Z 5 284.115 278.993 230.205 1.00 33.75 ATOM 46 CZ3 TRP Z 5 283.323 276.825 230.899 1.00 33.75 ATOM 47 CH2 TRP Z 5 284.359 277.735 230.673 1.00 33.75 ATOM 48 N ARG Z 6 276.727 276.661 228.685 1.00 35.05 ATOM 49 CA ARG Z 6 275.402 276.057 228.746 1.00 35.05 ATOM 50 C ARG Z 6 275.501 274.578 229.094 1.00 35.05 ATOM 51 O ARG Z 6 274.720 274.067 229.904 1.00 35.05 ATOM 52 CB ARG Z 6 274.673 276.257 227.419 1.00 35.05 ATOM 53 CG ARG Z 6 273.419 275.416 227.265 1.00 35.05 ATOM 54 CD ARG Z 6 272.306 275.945 228.140 1.00 35.05 ATOM 55 NE ARG Z 6 271.832 277.244 227.684 1.00 35.05 ATOM 56 CZ ARG Z 6 271.166 278.104 228.441 1.00 35.05 ATOM 57 NH1 ARG Z 6 270.882 277.837 229.704 1.00 35.05 ATOM 58 NH2 ARG Z 6 270.783 279.265 227.919 1.00 35.05 ATOM 59 N LYS Z 7 276.462 273.878 228.489 1.00 34.00 ATOM 60 CA LYS Z 7 276.704 272.478 228.816 1.00 34.00 ATOM 61 C LYS Z 7 277.092 272.307 230.278 1.00 34.00 ATOM 62 O LYS Z 7 276.612 271.391 230.952 1.00 34.00 ATOM 63 CB LYS Z 7 277.796 271.932 227.898 1.00 34.00 ATOM 64 CG LYS Z 7 278.180 270.490 228.126 1.00 34.00 ATOM 65 CD LYS Z 7 279.210 270.065 227.100 1.00 34.00 ATOM 66 CE LYS Z 7 279.553 268.597 227.219 1.00 34.00 ATOM 67 NZ LYS Z 7 280.410 268.147 226.092 1.00 34.00 ATOM 68 N LYS Z 8 277.964 273.179 230.785 1.00 35.30 ATOM 69 CA LYS Z 8 278.364 273.100 232.187 1.00 35.30 ATOM 70 C LYS Z 8 277.180 273.332 233.120 1.00 35.30 ATOM 71 O LYS Z 8 276.995 272.599 234.100 1.00 35.30 ATOM 72 CB LYS Z 8 279.474 274.111 232.463 1.00 35.30 ATOM 73 CG LYS Z 8 279.985 274.103 233.884 1.00 35.30 ATOM 74 CD LYS Z 8 281.158 275.041 234.038 1.00 35.30 ATOM 75 CE LYS Z 8 282.015 274.655 235.215 1.00 35.30 ATOM 76 NZ LYS Z 8 282.972 273.582 234.866 1.00 35.30 ATOM 77 N ARG Z 9 276.367 274.350 232.831 1.00 36.61 ATOM 78 CA ARG Z 9 275.198 274.631 233.655 1.00 36.61 ATOM 79 C ARG Z 9 274.211 273.475 233.618 1.00 36.61 ATOM 80 O ARG Z 9 273.634 273.104 234.648 1.00 36.61 ATOM 81 CB ARG Z 9 274.532 275.921 233.181 1.00 36.61 ATOM 82 CG ARG Z 9 273.219 276.227 233.862 1.00 36.61 ATOM 83 CD ARG Z 9 272.406 277.203 233.050 1.00 36.61 ATOM 84 NE ARG Z 9 272.953 278.550 233.132 1.00 36.61 ATOM 85 CZ ARG Z 9 272.310 279.643 232.750 1.00 36.61 ATOM 86 NH1 ARG Z 9 271.088 279.584 232.250 1.00 36.61 ATOM 87 NH2 ARG Z 9 272.908 280.823 232.873 1.00 36.61 ATOM 88 N THR Z 10 274.026 272.872 232.445 1.00 36.11 ATOM 89 CA THR Z 10 273.134 271.726 232.350 1.00 36.11 ATOM 90 C THR Z 10 273.678 270.545 233.137 1.00 36.11 ATOM 91 O THR Z 10 272.914 269.839 233.795 1.00 36.11 ATOM 92 CB THR Z 10 272.919 271.340 230.890 1.00 36.11 ATOM 93 OG1 THR Z 10 272.539 272.498 230.140 1.00 36.11 ATOM 94 CG2 THR Z 10 271.831 270.306 230.786 1.00 36.11 ATOM 95 N ARG Z 11 274.994 270.328 233.102 1.00 34.96 ATOM 96 CA ARG Z 11 275.583 269.230 233.861 1.00 34.96 ATOM 97 C ARG Z 11 275.401 269.434 235.358 1.00 34.96 ATOM 98 O ARG Z 11 275.098 268.485 236.091 1.00 34.96 ATOM 99 CB ARG Z 11 277.063 269.098 233.518 1.00 34.96 ATOM 100 CG ARG Z 11 277.359 268.071 232.454 1.00 34.96 ATOM 101 CD ARG Z 11 278.762 268.226 231.912 1.00 34.96 ATOM 102 NE ARG Z 11 278.924 267.500 230.661 1.00 34.96 ATOM 103 CZ ARG Z 11 279.939 266.694 230.388 1.00 34.96 ATOM 104 NH1 ARG Z 11 280.932 266.520 231.244 1.00 34.96 ATOM 105 NH2 ARG Z 11 279.960 266.049 229.227 1.00 34.96 ATOM 106 N ARG Z 12 275.576 270.668 235.830 1.00 36.82 ATOM 107 CA ARG Z 12 275.316 270.955 237.238 1.00 36.82 ATOM 108 C ARG Z 12 273.851 270.716 237.578 1.00 36.82 ATOM 109 O ARG Z 12 273.525 270.207 238.659 1.00 36.82 ATOM 110 CB ARG Z 12 275.716 272.392 237.566 1.00 36.82 ATOM 111 CG ARG Z 12 277.162 272.718 237.242 1.00 36.82 ATOM 112 CD ARG Z 12 277.565 274.085 237.767 1.00 36.82 ATOM 113 NE ARG Z 12 278.948 274.103 238.228 1.00 36.82 ATOM 114 CZ ARG Z 12 279.767 275.140 238.109 1.00 36.82 ATOM 115 NH1 ARG Z 12 279.374 276.270 237.543 1.00 36.82 ATOM 116 NH2 ARG Z 12 281.011 275.040 238.566 1.00 36.82 ATOM 117 N LEU Z 13 272.951 271.078 236.664 1.00 37.73 ATOM 118 CA LEU Z 13 271.530 270.862 236.902 1.00 37.73 ATOM 119 C LEU Z 13 271.194 269.375 236.979 1.00 37.73 ATOM 120 O LEU Z 13 270.382 268.962 237.812 1.00 37.73 ATOM 121 CB LEU Z 13 270.718 271.552 235.811 1.00 37.73 ATOM 122 CG LEU Z 13 269.202 271.439 235.886 1.00 37.73 ATOM 123 CD1 LEU Z 13 268.697 272.122 237.136 1.00 37.73 ATOM 124 CD2 LEU Z 13 268.592 272.072 234.655 1.00 37.73 ATOM 125 N LYS Z 14 271.805 268.554 236.120 1.00 36.88 ATOM 126 CA LYS Z 14 271.608 267.108 236.229 1.00 36.88 ATOM 127 C LYS Z 14 272.199 266.557 237.518 1.00 36.88 ATOM 128 O LYS Z 14 271.648 265.619 238.099 1.00 36.88 ATOM 129 CB LYS Z 14 272.176 266.356 235.023 1.00 36.88 ATOM 130 CG LYS Z 14 272.168 267.098 233.717 1.00 36.88 ATOM 131 CD LYS Z 14 271.736 266.215 232.566 1.00 36.88 ATOM 132 CE LYS Z 14 272.798 265.191 232.233 1.00 36.88 ATOM 133 NZ LYS Z 14 272.535 264.526 230.932 1.00 36.88 ATOM 134 N ARG Z 15 273.332 267.100 237.970 1.00 37.02 ATOM 135 CA ARG Z 15 273.865 266.669 239.260 1.00 37.02 ATOM 136 C ARG Z 15 272.872 266.957 240.378 1.00 37.02 ATOM 137 O ARG Z 15 272.632 266.107 241.246 1.00 37.02 ATOM 138 CB ARG Z 15 275.195 267.367 239.547 1.00 37.02 ATOM 139 CG ARG Z 15 276.432 266.556 239.206 1.00 37.02 ATOM 140 CD ARG Z 15 277.662 267.449 239.082 1.00 37.02 ATOM 141 NE ARG Z 15 278.502 267.410 240.273 1.00 37.02 ATOM 142 CZ ARG Z 15 279.830 267.405 240.257 1.00 37.02 ATOM 143 NH1 ARG Z 15 280.508 267.456 239.122 1.00 37.02 ATOM 144 NH2 ARG Z 15 280.493 267.353 241.408 1.00 37.02 ATOM 145 N LYS Z 16 272.270 268.148 240.360 1.00 37.92 ATOM 146 CA LYS Z 16 271.271 268.489 241.367 1.00 37.92 ATOM 147 C LYS Z 16 270.044 267.589 241.267 1.00 37.92 ATOM 148 O LYS Z 16 269.490 267.165 242.289 1.00 37.92 ATOM 149 CB LYS Z 16 270.873 269.957 241.235 1.00 37.92 ATOM 150 CG LYS Z 16 271.268 270.809 242.427 1.00 37.92 ATOM 151 CD LYS Z 16 272.700 271.305 242.301 1.00 37.92 ATOM 152 CE LYS Z 16 272.782 272.530 241.406 1.00 37.92 ATOM 153 NZ LYS Z 16 274.185 272.981 241.196 1.00 37.92 ATOM 154 N ARG Z 17 269.593 267.301 240.045 1.00 37.04 ATOM 155 CA ARG Z 17 268.444 266.419 239.872 1.00 37.04 ATOM 156 C ARG Z 17 268.742 265.020 240.392 1.00 37.04 ATOM 157 O ARG Z 17 267.891 264.394 241.031 1.00 37.04 ATOM 158 CB ARG Z 17 268.037 266.356 238.402 1.00 37.04 ATOM 159 CG ARG Z 17 267.307 267.573 237.887 1.00 37.04 ATOM 160 CD ARG Z 17 267.288 267.559 236.374 1.00 37.04 ATOM 161 NE ARG Z 17 266.474 268.632 235.823 1.00 37.04 ATOM 162 CZ ARG Z 17 266.712 269.228 234.663 1.00 37.04 ATOM 163 NH1 ARG Z 17 267.740 268.883 233.907 1.00 37.04 ATOM 164 NH2 ARG Z 17 265.898 270.196 234.253 1.00 37.04 ATOM 165 N ARG Z 18 269.944 264.512 240.119 1.00 36.49 ATOM 166 CA ARG Z 18 270.341 263.211 240.643 1.00 36.49 ATOM 167 C ARG Z 18 270.359 263.217 242.163 1.00 36.49 ATOM 168 O ARG Z 18 269.907 262.259 242.798 1.00 36.49 ATOM 169 CB ARG Z 18 271.710 262.820 240.093 1.00 36.49 ATOM 170 CG ARG Z 18 271.675 262.195 238.716 1.00 36.49 ATOM 171 CD ARG Z 18 272.869 261.286 238.500 1.00 36.49 ATOM 172 NE ARG Z 18 274.130 261.953 238.801 1.00 36.49 ATOM 173 CZ ARG Z 18 274.774 262.753 237.963 1.00 36.49 ATOM 174 NH1 ARG Z 18 274.301 263.016 236.757 1.00 36.49 ATOM 175 NH2 ARG Z 18 275.923 263.300 238.344 1.00 36.49 ATOM 176 N LYS Z 19 270.882 264.287 242.766 1.00 36.26 ATOM 177 CA LYS Z 19 270.908 264.367 244.224 1.00 36.26 ATOM 178 C LYS Z 19 269.502 264.372 244.808 1.00 36.26 ATOM 179 O LYS Z 19 269.222 263.658 245.779 1.00 36.26 ATOM 180 CB LYS Z 19 271.663 265.617 244.669 1.00 36.26 ATOM 181 CG LYS Z 19 273.160 265.443 244.782 1.00 36.26 ATOM 182 CD LYS Z 19 273.788 266.644 245.468 1.00 36.26 ATOM 183 CE LYS Z 19 273.671 266.543 246.981 1.00 36.26 ATOM 184 NZ LYS Z 19 272.512 267.313 247.500 1.00 36.26 ATOM 185 N VAL Z 20 268.603 265.170 244.233 1.00 36.39 ATOM 186 CA VAL Z 20 267.247 265.247 244.767 1.00 36.39 ATOM 187 C VAL Z 20 266.507 263.930 244.553 1.00 36.39 ATOM 188 O VAL Z 20 265.712 263.506 245.399 1.00 36.39 ATOM 189 CB VAL Z 20 266.496 266.453 244.168 1.00 36.39 ATOM 190 CG1 VAL Z 20 265.815 266.100 242.858 1.00 36.39 ATOM 191 CG2 VAL Z 20 265.498 266.996 245.170 1.00 36.39 ATOM 192 N ARG Z 21 266.771 263.249 243.436 1.00 35.98 ATOM 193 CA ARG Z 21 266.137 261.960 243.192 1.00 35.98 ATOM 194 C ARG Z 21 266.661 260.896 244.144 1.00 35.98 ATOM 195 O ARG Z 21 265.908 260.016 244.572 1.00 35.98 ATOM 196 CB ARG Z 21 266.345 261.543 241.741 1.00 35.98 ATOM 197 CG ARG Z 21 265.246 262.029 240.827 1.00 35.98 ATOM 198 CD ARG Z 21 264.408 260.883 240.323 1.00 35.98 ATOM 199 NE ARG Z 21 265.154 260.068 239.377 1.00 35.98 ATOM 200 CZ ARG Z 21 264.600 259.256 238.491 1.00 35.98 ATOM 201 NH1 ARG Z 21 263.288 259.116 238.409 1.00 35.98 ATOM 202 NH2 ARG Z 21 265.381 258.574 237.660 1.00 35.98 ATOM 203 N ALA Z 22 267.951 260.947 244.475 1.00 35.91 ATOM 204 CA ALA Z 22 268.487 260.026 245.469 1.00 35.91 ATOM 205 C ALA Z 22 267.896 260.304 246.842 1.00 35.91 ATOM 206 O ALA Z 22 267.604 259.371 247.598 1.00 35.91 ATOM 207 CB ALA Z 22 270.010 260.122 245.509 1.00 35.91 ATOM 208 N ARG Z 23 267.715 261.582 247.183 1.00 36.39 ATOM 209 CA ARG Z 23 267.041 261.929 248.430 1.00 36.39 ATOM 210 C ARG Z 23 265.632 261.356 248.462 1.00 36.39 ATOM 211 O ARG Z 23 265.213 260.754 249.456 1.00 36.39 ATOM 212 CB ARG Z 23 267.002 263.447 248.604 1.00 36.39 ATOM 213 CG ARG Z 23 268.308 264.057 249.074 1.00 36.39 ATOM 214 CD ARG Z 23 268.137 265.499 249.538 1.00 36.39 ATOM 215 NE ARG Z 23 267.386 265.612 250.783 1.00 36.39 ATOM 216 CZ ARG Z 23 266.075 265.799 250.857 1.00 36.39 ATOM 217 NH1 ARG Z 23 265.330 265.906 249.770 1.00 36.39 ATOM 218 NH2 ARG Z 23 265.499 265.889 252.052 1.00 36.39 ATOM 219 N SER Z 24 264.886 261.534 247.378 1.00 38.80 ATOM 220 CA SER Z 24 263.557 260.956 247.287 1.00 38.80 ATOM 221 C SER Z 24 263.651 259.443 247.134 1.00 38.80 ATOM 222 O SER Z 24 264.656 258.901 246.674 1.00 38.80 ATOM 223 CB SER Z 24 262.790 261.557 246.111 1.00 38.80 ATOM 224 OG SER Z 24 262.894 262.971 246.101 1.00 38.80 ATOM 225 N LYS Z 25 262.582 258.761 247.524 1.00 42.41 ATOM 226 CA LYS Z 25 262.527 257.309 247.416 1.00 42.41 ATOM 227 C LYS Z 25 261.085 256.817 247.442 1.00 42.41 ATOM 228 O LYS Z 25 260.508 256.500 246.403 1.00 42.41 ATOM 229 CB LYS Z 25 263.329 256.651 248.541 1.00 42.41 ATOM 230 CG LYS Z 25 264.736 256.221 248.145 1.00 42.41 ATOM 231 CD LYS Z 25 264.770 255.664 246.731 1.00 42.41 ATOM 232 CE LYS Z 25 266.194 255.416 246.266 1.00 42.41 ATOM 233 NZ LYS Z 25 266.284 255.353 244.783 1.00 42.41 TER