HEADER RIBOSOME 31-DEC-69 8CKU TITLE Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome TITLE 2 with ligands and eEF2 in the absence of sordarin COMPND MOL_ID: 57; COMPND 2 MOLECULE: RPL41A isoform 1; COMPND 3 CHAIN: Z; EXPDTA ELECTRON MICROSCOPY DBREF 8CKU Z 1 25 UNP A0A8H8UM A0A8H8UMB4_ 1 25 SEQRES 1 Z 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 Z 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET Z 1 287.370 297.512 347.949 1.00 62.33 ATOM 2 CA MET Z 1 287.510 298.901 347.541 1.00 62.33 ATOM 3 C MET Z 1 286.869 299.844 348.551 1.00 62.33 ATOM 4 O MET Z 1 285.657 300.052 348.531 1.00 62.33 ATOM 5 CB MET Z 1 286.894 299.112 346.166 1.00 62.33 ATOM 6 CG MET Z 1 287.246 300.438 345.549 1.00 62.33 ATOM 7 SD MET Z 1 288.990 300.556 345.157 1.00 62.33 ATOM 8 CE MET Z 1 288.948 301.833 343.918 1.00 62.33 ATOM 9 N ARG Z 2 287.697 300.415 349.425 1.00 58.45 ATOM 10 CA ARG Z 2 287.209 301.335 350.443 1.00 58.45 ATOM 11 C ARG Z 2 286.467 302.492 349.798 1.00 58.45 ATOM 12 O ARG Z 2 286.800 302.920 348.693 1.00 58.45 ATOM 13 CB ARG Z 2 288.368 301.876 351.275 1.00 58.45 ATOM 14 CG ARG Z 2 289.070 300.833 352.093 1.00 58.45 ATOM 15 CD ARG Z 2 289.380 301.339 353.486 1.00 58.45 ATOM 16 NE ARG Z 2 290.435 302.341 353.540 1.00 58.45 ATOM 17 CZ ARG Z 2 290.767 303.007 354.637 1.00 58.45 ATOM 18 NH1 ARG Z 2 290.139 302.808 355.782 1.00 58.45 ATOM 19 NH2 ARG Z 2 291.764 303.883 354.590 1.00 58.45 ATOM 20 N ALA Z 3 285.431 302.978 350.479 1.00 56.37 ATOM 21 CA ALA Z 3 284.746 304.169 349.996 1.00 56.37 ATOM 22 C ALA Z 3 285.698 305.349 349.903 1.00 56.37 ATOM 23 O ALA Z 3 285.548 306.201 349.024 1.00 56.37 ATOM 24 CB ALA Z 3 283.569 304.504 350.907 1.00 56.37 ATOM 25 N LYS Z 4 286.700 305.398 350.777 1.00 57.74 ATOM 26 CA LYS Z 4 287.660 306.495 350.750 1.00 57.74 ATOM 27 C LYS Z 4 288.432 306.514 349.436 1.00 57.74 ATOM 28 O LYS Z 4 288.554 307.554 348.783 1.00 57.74 ATOM 29 CB LYS Z 4 288.600 306.371 351.948 1.00 57.74 ATOM 30 CG LYS Z 4 289.727 307.364 351.985 1.00 57.74 ATOM 31 CD LYS Z 4 290.803 306.883 352.931 1.00 57.74 ATOM 32 CE LYS Z 4 290.510 307.321 354.345 1.00 57.74 ATOM 33 NZ LYS Z 4 290.408 308.792 354.436 1.00 57.74 ATOM 34 N TRP Z 5 288.949 305.364 349.018 1.00 59.65 ATOM 35 CA TRP Z 5 289.680 305.298 347.759 1.00 59.65 ATOM 36 C TRP Z 5 288.790 305.196 346.532 1.00 59.65 ATOM 37 O TRP Z 5 289.246 305.526 345.438 1.00 59.65 ATOM 38 CB TRP Z 5 290.692 304.166 347.835 1.00 59.65 ATOM 39 CG TRP Z 5 291.502 304.327 349.061 1.00 59.65 ATOM 40 CD1 TRP Z 5 291.899 305.508 349.613 1.00 59.65 ATOM 41 CD2 TRP Z 5 291.951 303.307 349.939 1.00 59.65 ATOM 42 NE1 TRP Z 5 292.617 305.284 350.751 1.00 59.65 ATOM 43 CE2 TRP Z 5 292.656 303.936 350.980 1.00 59.65 ATOM 44 CE3 TRP Z 5 291.848 301.920 349.940 1.00 59.65 ATOM 45 CZ2 TRP Z 5 293.252 303.226 352.006 1.00 59.65 ATOM 46 CZ3 TRP Z 5 292.434 301.219 350.964 1.00 59.65 ATOM 47 CH2 TRP Z 5 293.126 301.870 351.983 1.00 59.65 ATOM 48 N ARG Z 6 287.527 304.808 346.674 1.00 60.32 ATOM 49 CA ARG Z 6 286.595 305.048 345.582 1.00 60.32 ATOM 50 C ARG Z 6 286.411 306.546 345.378 1.00 60.32 ATOM 51 O ARG Z 6 286.362 307.029 344.240 1.00 60.32 ATOM 52 CB ARG Z 6 285.264 304.354 345.859 1.00 60.32 ATOM 53 CG ARG Z 6 284.690 303.607 344.664 1.00 60.32 ATOM 54 CD ARG Z 6 283.261 303.161 344.920 1.00 60.32 ATOM 55 NE ARG Z 6 283.195 301.838 345.532 1.00 60.32 ATOM 56 CZ ARG Z 6 283.141 300.697 344.857 1.00 60.32 ATOM 57 NH1 ARG Z 6 283.142 300.675 343.535 1.00 60.32 ATOM 58 NH2 ARG Z 6 283.086 299.549 345.527 1.00 60.32 ATOM 59 N LYS Z 7 286.333 307.302 346.479 1.00 60.94 ATOM 60 CA LYS Z 7 286.344 308.758 346.392 1.00 60.94 ATOM 61 C LYS Z 7 287.630 309.258 345.754 1.00 60.94 ATOM 62 O LYS Z 7 287.607 310.184 344.942 1.00 60.94 ATOM 63 CB LYS Z 7 286.182 309.379 347.780 1.00 60.94 ATOM 64 CG LYS Z 7 284.755 309.575 348.243 1.00 60.94 ATOM 65 CD LYS Z 7 284.653 310.813 349.121 1.00 60.94 ATOM 66 CE LYS Z 7 283.213 311.159 349.439 1.00 60.94 ATOM 67 NZ LYS Z 7 283.035 311.540 350.864 1.00 60.94 ATOM 68 N LYS Z 8 288.766 308.678 346.132 1.00 62.17 ATOM 69 CA LYS Z 8 290.034 309.083 345.535 1.00 62.17 ATOM 70 C LYS Z 8 290.044 308.834 344.030 1.00 62.17 ATOM 71 O LYS Z 8 290.501 309.681 343.254 1.00 62.17 ATOM 72 CB LYS Z 8 291.184 308.342 346.204 1.00 62.17 ATOM 73 CG LYS Z 8 292.540 308.936 345.918 1.00 62.17 ATOM 74 CD LYS Z 8 293.403 308.890 347.154 1.00 62.17 ATOM 75 CE LYS Z 8 294.766 309.476 346.892 1.00 62.17 ATOM 76 NZ LYS Z 8 294.754 310.953 347.028 1.00 62.17 ATOM 77 N ARG Z 9 289.539 307.675 343.602 1.00 64.08 ATOM 78 CA ARG Z 9 289.505 307.351 342.181 1.00 64.08 ATOM 79 C ARG Z 9 288.585 308.297 341.428 1.00 64.08 ATOM 80 O ARG Z 9 288.945 308.813 340.363 1.00 64.08 ATOM 81 CB ARG Z 9 289.065 305.900 341.980 1.00 64.08 ATOM 82 CG ARG Z 9 290.132 304.883 342.351 1.00 64.08 ATOM 83 CD ARG Z 9 290.439 303.921 341.214 1.00 64.08 ATOM 84 NE ARG Z 9 289.356 302.979 340.967 1.00 64.08 ATOM 85 CZ ARG Z 9 289.321 302.133 339.947 1.00 64.08 ATOM 86 NH1 ARG Z 9 290.294 302.088 339.053 1.00 64.08 ATOM 87 NH2 ARG Z 9 288.283 301.311 339.821 1.00 64.08 ATOM 88 N THR Z 10 287.385 308.532 341.958 1.00 63.57 ATOM 89 CA THR Z 10 286.480 309.450 341.283 1.00 63.57 ATOM 90 C THR Z 10 287.030 310.867 341.294 1.00 63.57 ATOM 91 O THR Z 10 286.773 311.633 340.366 1.00 63.57 ATOM 92 CB THR Z 10 285.083 309.394 341.908 1.00 63.57 ATOM 93 OG1 THR Z 10 284.138 309.994 341.015 1.00 63.57 ATOM 94 CG2 THR Z 10 285.038 310.137 343.224 1.00 63.57 ATOM 95 N ARG Z 11 287.811 311.227 342.310 1.00 63.90 ATOM 96 CA ARG Z 11 288.462 312.530 342.321 1.00 63.90 ATOM 97 C ARG Z 11 289.483 312.637 341.200 1.00 63.90 ATOM 98 O ARG Z 11 289.547 313.655 340.493 1.00 63.90 ATOM 99 CB ARG Z 11 289.126 312.763 343.676 1.00 63.90 ATOM 100 CG ARG Z 11 288.274 313.563 344.621 1.00 63.90 ATOM 101 CD ARG Z 11 288.948 313.770 345.947 1.00 63.90 ATOM 102 NE ARG Z 11 288.125 314.625 346.788 1.00 63.90 ATOM 103 CZ ARG Z 11 288.246 314.728 348.102 1.00 63.90 ATOM 104 NH1 ARG Z 11 289.150 314.033 348.770 1.00 63.90 ATOM 105 NH2 ARG Z 11 287.441 315.554 348.762 1.00 63.90 ATOM 106 N ARG Z 12 290.312 311.603 341.050 1.00 65.85 ATOM 107 CA ARG Z 12 291.258 311.557 339.942 1.00 65.85 ATOM 108 C ARG Z 12 290.532 311.717 338.614 1.00 65.85 ATOM 109 O ARG Z 12 290.920 312.534 337.770 1.00 65.85 ATOM 110 CB ARG Z 12 292.044 310.249 339.974 1.00 65.85 ATOM 111 CG ARG Z 12 293.043 310.147 341.112 1.00 65.85 ATOM 112 CD ARG Z 12 294.233 309.274 340.733 1.00 65.85 ATOM 113 NE ARG Z 12 294.631 308.372 341.809 1.00 65.85 ATOM 114 CZ ARG Z 12 295.596 308.623 342.684 1.00 65.85 ATOM 115 NH1 ARG Z 12 296.264 309.764 342.671 1.00 65.85 ATOM 116 NH2 ARG Z 12 295.894 307.707 343.601 1.00 65.85 ATOM 117 N LEU Z 13 289.457 310.952 338.422 1.00 65.83 ATOM 118 CA LEU Z 13 288.698 311.055 337.181 1.00 65.83 ATOM 119 C LEU Z 13 288.139 312.455 336.998 1.00 65.83 ATOM 120 O LEU Z 13 288.167 313.000 335.891 1.00 65.83 ATOM 121 CB LEU Z 13 287.571 310.025 337.155 1.00 65.83 ATOM 122 CG LEU Z 13 287.873 308.633 336.593 1.00 65.83 ATOM 123 CD1 LEU Z 13 288.231 308.734 335.123 1.00 65.83 ATOM 124 CD2 LEU Z 13 288.980 307.931 337.357 1.00 65.83 ATOM 125 N LYS Z 14 287.639 313.062 338.075 1.00 66.17 ATOM 126 CA LYS Z 14 286.996 314.365 337.959 1.00 66.17 ATOM 127 C LYS Z 14 287.987 315.435 337.525 1.00 66.17 ATOM 128 O LYS Z 14 287.724 316.191 336.578 1.00 66.17 ATOM 129 CB LYS Z 14 286.334 314.745 339.280 1.00 66.17 ATOM 130 CG LYS Z 14 285.494 316.002 339.192 1.00 66.17 ATOM 131 CD LYS Z 14 284.783 316.300 340.499 1.00 66.17 ATOM 132 CE LYS Z 14 283.454 316.983 340.230 1.00 66.17 ATOM 133 NZ LYS Z 14 282.360 316.476 341.100 1.00 66.17 ATOM 134 N ARG Z 15 289.146 315.511 338.183 1.00 67.69 ATOM 135 CA ARG Z 15 290.027 316.593 337.761 1.00 67.69 ATOM 136 C ARG Z 15 290.710 316.257 336.445 1.00 67.69 ATOM 137 O ARG Z 15 291.017 317.169 335.678 1.00 67.69 ATOM 138 CB ARG Z 15 291.065 316.976 338.827 1.00 67.69 ATOM 139 CG ARG Z 15 292.348 316.177 338.895 1.00 67.69 ATOM 140 CD ARG Z 15 292.132 314.790 339.400 1.00 67.69 ATOM 141 NE ARG Z 15 293.373 314.038 339.548 1.00 67.69 ATOM 142 CZ ARG Z 15 293.972 313.377 338.567 1.00 67.69 ATOM 143 NH1 ARG Z 15 293.485 313.373 337.338 1.00 67.69 ATOM 144 NH2 ARG Z 15 295.088 312.702 338.824 1.00 67.69 ATOM 145 N LYS Z 16 290.884 314.972 336.119 1.00 67.34 ATOM 146 CA LYS Z 16 291.395 314.627 334.798 1.00 67.34 ATOM 147 C LYS Z 16 290.443 315.088 333.705 1.00 67.34 ATOM 148 O LYS Z 16 290.870 315.645 332.687 1.00 67.34 ATOM 149 CB LYS Z 16 291.621 313.118 334.705 1.00 67.34 ATOM 150 CG LYS Z 16 291.900 312.612 333.301 1.00 67.34 ATOM 151 CD LYS Z 16 291.879 311.090 333.254 1.00 67.34 ATOM 152 CE LYS Z 16 291.912 310.574 331.824 1.00 67.34 ATOM 153 NZ LYS Z 16 291.134 309.313 331.673 1.00 67.34 ATOM 154 N ARG Z 17 289.144 314.878 333.904 1.00 67.94 ATOM 155 CA ARG Z 17 288.175 315.322 332.912 1.00 67.94 ATOM 156 C ARG Z 17 288.118 316.842 332.842 1.00 67.94 ATOM 157 O ARG Z 17 287.899 317.412 331.768 1.00 67.94 ATOM 158 CB ARG Z 17 286.805 314.736 333.217 1.00 67.94 ATOM 159 CG ARG Z 17 286.755 313.224 333.101 1.00 67.94 ATOM 160 CD ARG Z 17 285.367 312.756 333.432 1.00 67.94 ATOM 161 NE ARG Z 17 284.448 313.224 332.405 1.00 67.94 ATOM 162 CZ ARG Z 17 283.541 314.171 332.588 1.00 67.94 ATOM 163 NH1 ARG Z 17 283.463 314.839 333.726 1.00 67.94 ATOM 164 NH2 ARG Z 17 282.716 314.478 331.592 1.00 67.94 ATOM 165 N ARG Z 18 288.302 317.520 333.975 1.00 68.18 ATOM 166 CA ARG Z 18 288.360 318.979 333.932 1.00 68.18 ATOM 167 C ARG Z 18 289.578 319.465 333.148 1.00 68.18 ATOM 168 O ARG Z 18 289.499 320.465 332.426 1.00 68.18 ATOM 169 CB ARG Z 18 288.367 319.553 335.347 1.00 68.18 ATOM 170 CG ARG Z 18 288.300 321.068 335.381 1.00 68.18 ATOM 171 CD ARG Z 18 288.237 321.614 336.794 1.00 68.18 ATOM 172 NE ARG Z 18 289.439 321.335 337.568 1.00 68.18 ATOM 173 CZ ARG Z 18 289.472 320.535 338.625 1.00 68.18 ATOM 174 NH1 ARG Z 18 288.388 319.910 339.052 1.00 68.18 ATOM 175 NH2 ARG Z 18 290.620 320.362 339.271 1.00 68.18 ATOM 176 N LYS Z 19 290.716 318.777 333.270 1.00 68.49 ATOM 177 CA LYS Z 19 291.859 319.142 332.433 1.00 68.49 ATOM 178 C LYS Z 19 291.586 318.849 330.964 1.00 68.49 ATOM 179 O LYS Z 19 292.070 319.569 330.083 1.00 68.49 ATOM 180 CB LYS Z 19 293.138 318.431 332.881 1.00 68.49 ATOM 181 CG LYS Z 19 293.324 318.291 334.367 1.00 68.49 ATOM 182 CD LYS Z 19 293.567 319.625 335.037 1.00 68.49 ATOM 183 CE LYS Z 19 294.650 319.504 336.097 1.00 68.49 ATOM 184 NZ LYS Z 19 295.045 320.823 336.657 1.00 68.49 ATOM 185 N VAL Z 20 290.846 317.779 330.675 1.00 69.44 ATOM 186 CA VAL Z 20 290.417 317.544 329.298 1.00 69.44 ATOM 187 C VAL Z 20 289.583 318.718 328.805 1.00 69.44 ATOM 188 O VAL Z 20 289.729 319.177 327.663 1.00 69.44 ATOM 189 CB VAL Z 20 289.643 316.219 329.194 1.00 69.44 ATOM 190 CG1 VAL Z 20 289.012 316.084 327.816 1.00 69.44 ATOM 191 CG2 VAL Z 20 290.558 315.050 329.490 1.00 69.44 ATOM 192 N ARG Z 21 288.710 319.232 329.670 1.00 69.31 ATOM 193 CA ARG Z 21 287.948 320.435 329.354 1.00 69.31 ATOM 194 C ARG Z 21 288.864 321.609 329.055 1.00 69.31 ATOM 195 O ARG Z 21 288.645 322.351 328.092 1.00 69.31 ATOM 196 CB ARG Z 21 287.037 320.784 330.526 1.00 69.31 ATOM 197 CG ARG Z 21 286.109 321.950 330.281 1.00 69.31 ATOM 198 CD ARG Z 21 285.120 321.575 329.230 1.00 69.31 ATOM 199 NE ARG Z 21 284.811 320.159 329.349 1.00 69.31 ATOM 200 CZ ARG Z 21 283.756 319.577 328.808 1.00 69.31 ATOM 201 NH1 ARG Z 21 282.853 320.275 328.139 1.00 69.31 ATOM 202 NH2 ARG Z 21 283.606 318.263 328.941 1.00 69.31 ATOM 203 N ALA Z 22 289.902 321.786 329.869 1.00 70.36 ATOM 204 CA ALA Z 22 290.783 322.936 329.705 1.00 70.36 ATOM 205 C ALA Z 22 291.583 322.838 328.414 1.00 70.36 ATOM 206 O ALA Z 22 291.808 323.850 327.739 1.00 70.36 ATOM 207 CB ALA Z 22 291.712 323.059 330.909 1.00 70.36 ATOM 208 N ARG Z 23 292.033 321.632 328.060 1.00 68.18 ATOM 209 CA ARG Z 23 292.685 321.438 326.768 1.00 68.18 ATOM 210 C ARG Z 23 291.724 321.734 325.624 1.00 68.18 ATOM 211 O ARG Z 23 292.101 322.378 324.639 1.00 68.18 ATOM 212 CB ARG Z 23 293.238 320.017 326.649 1.00 68.18 ATOM 213 CG ARG Z 23 293.929 319.739 325.312 1.00 68.18 ATOM 214 CD ARG Z 23 293.991 318.248 324.995 1.00 68.18 ATOM 215 NE ARG Z 23 295.129 317.911 324.146 1.00 68.18 ATOM 216 CZ ARG Z 23 295.110 317.914 322.820 1.00 68.18 ATOM 217 NH1 ARG Z 23 294.001 318.170 322.147 1.00 68.18 ATOM 218 NH2 ARG Z 23 296.230 317.641 322.151 1.00 68.18 ATOM 219 N SER Z 24 290.479 321.278 325.735 1.00 69.50 ATOM 220 CA SER Z 24 289.459 321.677 324.780 1.00 69.50 ATOM 221 C SER Z 24 289.000 323.100 325.089 1.00 69.50 ATOM 222 O SER Z 24 289.553 323.785 325.951 1.00 69.50 ATOM 223 CB SER Z 24 288.292 320.697 324.809 1.00 69.50 ATOM 224 OG SER Z 24 288.714 319.405 324.410 1.00 69.50 ATOM 225 N LYS Z 25 287.989 323.568 324.370 1.00 67.07 ATOM 226 CA LYS Z 25 287.431 324.882 324.662 1.00 67.07 ATOM 227 C LYS Z 25 285.911 324.817 324.750 1.00 67.07 ATOM 228 O LYS Z 25 285.357 324.293 325.717 1.00 67.07 ATOM 229 CB LYS Z 25 287.855 325.906 323.606 1.00 67.07 ATOM 230 CG LYS Z 25 287.404 325.575 322.192 1.00 67.07 ATOM 231 CD LYS Z 25 287.743 326.700 321.218 1.00 67.07 ATOM 232 CE LYS Z 25 289.231 326.794 320.937 1.00 67.07 ATOM 233 NZ LYS Z 25 289.740 325.595 320.217 1.00 67.07 TER