HEADER RIBOSOME 31-DEC-69 8EUB TITLE Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) TITLE 2 internal ribosome entry site (IRES), eEF2 and GDP, Structure I COMPND MOL_ID: 74; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 8EUB A 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET A 1 183.900 171.426 231.831 1.00 37.57 ATOM 2 CA MET A 1 184.929 171.576 230.809 1.00 31.17 ATOM 3 C MET A 1 184.590 170.732 229.594 1.00 26.80 ATOM 4 O MET A 1 185.061 169.604 229.474 1.00 34.91 ATOM 5 CB MET A 1 186.300 171.186 231.359 1.00 20.44 ATOM 6 CG MET A 1 187.469 171.717 230.547 1.00 21.60 ATOM 7 SD MET A 1 187.192 173.400 229.964 1.00 34.45 ATOM 8 CE MET A 1 188.649 173.663 228.961 1.00 18.78 ATOM 9 N ARG A 2 183.762 171.278 228.701 1.00 22.36 ATOM 10 CA ARG A 2 183.382 170.568 227.487 1.00 13.79 ATOM 11 C ARG A 2 184.592 170.118 226.692 1.00 19.42 ATOM 12 O ARG A 2 185.687 170.671 226.835 1.00 13.40 ATOM 13 CB ARG A 2 182.525 171.426 226.561 1.00 18.14 ATOM 14 CG ARG A 2 181.185 171.821 227.069 1.00 14.52 ATOM 15 CD ARG A 2 180.564 172.763 226.071 1.00 6.61 ATOM 16 NE ARG A 2 179.822 172.103 225.003 1.00 16.92 ATOM 17 CZ ARG A 2 178.783 172.675 224.414 1.00 19.59 ATOM 18 NH1 ARG A 2 178.405 173.903 224.725 1.00 9.15 ATOM 19 NH2 ARG A 2 178.091 171.993 223.515 1.00 26.94 ATOM 20 N ALA A 3 184.397 169.110 225.845 1.00 22.76 ATOM 21 CA ALA A 3 185.415 168.784 224.859 1.00 26.25 ATOM 22 C ALA A 3 185.648 169.953 223.912 1.00 21.02 ATOM 23 O ALA A 3 186.790 170.233 223.533 1.00 26.67 ATOM 24 CB ALA A 3 185.014 167.529 224.086 1.00 25.09 ATOM 25 N LYS A 4 184.582 170.660 223.526 1.00 11.86 ATOM 26 CA LYS A 4 184.740 171.694 222.514 1.00 21.91 ATOM 27 C LYS A 4 185.367 172.972 223.046 1.00 15.52 ATOM 28 O LYS A 4 185.711 173.842 222.241 1.00 25.76 ATOM 29 CB LYS A 4 183.409 172.052 221.859 1.00 19.06 ATOM 30 CG LYS A 4 182.436 172.778 222.742 1.00 17.09 ATOM 31 CD LYS A 4 181.146 172.993 221.985 1.00 15.96 ATOM 32 CE LYS A 4 181.326 174.012 220.896 1.00 9.08 ATOM 33 NZ LYS A 4 180.042 174.302 220.214 1.00 9.67 ATOM 34 N TRP A 5 185.521 173.126 224.361 1.00 23.93 ATOM 35 CA TRP A 5 186.338 174.231 224.838 1.00 10.63 ATOM 36 C TRP A 5 187.772 173.811 225.111 1.00 21.51 ATOM 37 O TRP A 5 188.676 174.642 225.001 1.00 28.86 ATOM 38 CB TRP A 5 185.758 174.877 226.102 1.00 18.86 ATOM 39 CG TRP A 5 184.313 175.278 226.032 1.00 13.45 ATOM 40 CD1 TRP A 5 183.343 174.963 226.930 1.00 11.27 ATOM 41 CD2 TRP A 5 183.656 175.984 224.968 1.00 22.21 ATOM 42 NE1 TRP A 5 182.139 175.485 226.535 1.00 24.31 ATOM 43 CE2 TRP A 5 182.300 176.103 225.324 1.00 16.68 ATOM 44 CE3 TRP A 5 184.085 176.545 223.762 1.00 18.29 ATOM 45 CZ2 TRP A 5 181.371 176.754 224.520 1.00 12.70 ATOM 46 CZ3 TRP A 5 183.161 177.188 222.965 1.00 12.20 ATOM 47 CH2 TRP A 5 181.819 177.286 223.346 1.00 18.27 ATOM 48 N ARG A 6 188.007 172.544 225.463 1.00 17.83 ATOM 49 CA ARG A 6 189.348 171.997 225.305 1.00 20.19 ATOM 50 C ARG A 6 189.769 172.024 223.846 1.00 26.03 ATOM 51 O ARG A 6 190.950 172.214 223.540 1.00 32.86 ATOM 52 CB ARG A 6 189.421 170.567 225.838 1.00 28.64 ATOM 53 CG ARG A 6 189.237 170.427 227.333 1.00 30.80 ATOM 54 CD ARG A 6 189.308 168.965 227.731 1.00 30.68 ATOM 55 NE ARG A 6 188.176 168.207 227.213 1.00 31.18 ATOM 56 CZ ARG A 6 188.059 166.890 227.292 1.00 31.72 ATOM 57 NH1 ARG A 6 189.037 166.137 227.766 1.00 35.10 ATOM 58 NH2 ARG A 6 186.948 166.309 226.851 1.00 33.21 ATOM 59 N LYS A 7 188.814 171.831 222.935 1.00 22.32 ATOM 60 CA LYS A 7 189.101 171.933 221.511 1.00 22.71 ATOM 61 C LYS A 7 189.459 173.363 221.128 1.00 16.58 ATOM 62 O LYS A 7 190.428 173.599 220.399 1.00 28.03 ATOM 63 CB LYS A 7 187.897 171.436 220.712 1.00 17.55 ATOM 64 CG LYS A 7 188.138 171.262 219.230 1.00 30.19 ATOM 65 CD LYS A 7 186.975 170.524 218.590 1.00 22.51 ATOM 66 CE LYS A 7 187.191 170.343 217.104 1.00 20.62 ATOM 67 NZ LYS A 7 186.162 169.469 216.489 1.00 22.46 ATOM 68 N LYS A 8 188.682 174.334 221.611 1.00 17.92 ATOM 69 CA LYS A 8 188.959 175.731 221.298 1.00 15.07 ATOM 70 C LYS A 8 190.231 176.209 221.985 1.00 19.40 ATOM 71 O LYS A 8 190.993 176.999 221.416 1.00 26.47 ATOM 72 CB LYS A 8 187.766 176.597 221.696 1.00 18.15 ATOM 73 CG LYS A 8 187.969 178.082 221.495 1.00 18.95 ATOM 74 CD LYS A 8 186.714 178.856 221.848 1.00 22.79 ATOM 75 CE LYS A 8 185.886 179.151 220.617 1.00 21.88 ATOM 76 NZ LYS A 8 186.491 180.235 219.809 1.00 21.71 ATOM 77 N ARG A 9 190.477 175.745 223.212 1.00 23.60 ATOM 78 CA ARG A 9 191.682 176.143 223.928 1.00 26.35 ATOM 79 C ARG A 9 192.935 175.541 223.308 1.00 21.61 ATOM 80 O ARG A 9 193.990 176.184 223.298 1.00 29.27 ATOM 81 CB ARG A 9 191.574 175.738 225.397 1.00 26.25 ATOM 82 CG ARG A 9 192.827 175.983 226.210 1.00 24.75 ATOM 83 CD ARG A 9 192.759 175.261 227.533 1.00 25.70 ATOM 84 NE ARG A 9 191.918 175.960 228.495 1.00 22.04 ATOM 85 CZ ARG A 9 191.833 175.641 229.778 1.00 25.67 ATOM 86 NH1 ARG A 9 192.521 174.632 230.284 1.00 25.19 ATOM 87 NH2 ARG A 9 191.035 176.349 230.571 1.00 27.07 ATOM 88 N THR A 10 192.843 174.317 222.787 1.00 22.60 ATOM 89 CA THR A 10 193.995 173.709 222.134 1.00 24.19 ATOM 90 C THR A 10 194.295 174.377 220.799 1.00 27.50 ATOM 91 O THR A 10 195.463 174.515 220.419 1.00 31.93 ATOM 92 CB THR A 10 193.761 172.214 221.942 1.00 27.14 ATOM 93 OG1 THR A 10 193.159 171.673 223.121 1.00 39.06 ATOM 94 CG2 THR A 10 195.077 171.508 221.693 1.00 25.94 ATOM 95 N ARG A 11 193.259 174.796 220.072 1.00 28.54 ATOM 96 CA ARG A 11 193.485 175.457 218.794 1.00 23.44 ATOM 97 C ARG A 11 194.178 176.797 218.984 1.00 27.80 ATOM 98 O ARG A 11 195.090 177.142 218.227 1.00 28.32 ATOM 99 CB ARG A 11 192.162 175.633 218.051 1.00 28.95 ATOM 100 CG ARG A 11 191.817 174.466 217.153 1.00 23.38 ATOM 101 CD ARG A 11 190.391 174.552 216.660 1.00 29.86 ATOM 102 NE ARG A 11 189.913 173.274 216.150 1.00 36.98 ATOM 103 CZ ARG A 11 189.116 173.141 215.099 1.00 38.16 ATOM 104 NH1 ARG A 11 188.687 174.193 214.421 1.00 36.67 ATOM 105 NH2 ARG A 11 188.744 171.923 214.716 1.00 31.89 ATOM 106 N ARG A 12 193.753 177.568 219.983 1.00 33.28 ATOM 107 CA ARG A 12 194.439 178.817 220.287 1.00 31.03 ATOM 108 C ARG A 12 195.881 178.562 220.713 1.00 29.23 ATOM 109 O ARG A 12 196.783 179.336 220.374 1.00 32.71 ATOM 110 CB ARG A 12 193.679 179.562 221.383 1.00 31.99 ATOM 111 CG ARG A 12 192.446 180.303 220.902 1.00 29.38 ATOM 112 CD ARG A 12 191.816 181.114 222.026 1.00 36.42 ATOM 113 NE ARG A 12 191.863 180.404 223.298 1.00 38.12 ATOM 114 CZ ARG A 12 190.798 180.096 224.026 1.00 39.15 ATOM 115 NH1 ARG A 12 189.578 180.431 223.643 1.00 35.98 ATOM 116 NH2 ARG A 12 190.963 179.434 225.167 1.00 38.40 ATOM 117 N LEU A 13 196.112 177.490 221.477 1.00 22.84 ATOM 118 CA LEU A 13 197.468 177.117 221.877 1.00 32.59 ATOM 119 C LEU A 13 198.328 176.666 220.701 1.00 31.04 ATOM 120 O LEU A 13 199.509 177.017 220.619 1.00 36.81 ATOM 121 CB LEU A 13 197.396 176.016 222.931 1.00 35.96 ATOM 122 CG LEU A 13 198.700 175.502 223.530 1.00 30.39 ATOM 123 CD1 LEU A 13 199.627 176.656 223.874 1.00 30.08 ATOM 124 CD2 LEU A 13 198.419 174.637 224.743 1.00 34.35 ATOM 125 N LYS A 14 197.755 175.896 219.779 1.00 26.92 ATOM 126 CA LYS A 14 198.535 175.334 218.676 1.00 31.50 ATOM 127 C LYS A 14 199.082 176.421 217.763 1.00 35.66 ATOM 128 O LYS A 14 200.231 176.363 217.311 1.00 39.43 ATOM 129 CB LYS A 14 197.659 174.399 217.860 1.00 30.69 ATOM 130 CG LYS A 14 197.580 172.983 218.344 1.00 33.67 ATOM 131 CD LYS A 14 196.677 172.187 217.421 1.00 33.10 ATOM 132 CE LYS A 14 197.426 171.703 216.193 1.00 37.88 ATOM 133 NZ LYS A 14 196.582 170.857 215.309 1.00 36.30 ATOM 134 N ARG A 15 198.243 177.392 217.449 1.00 34.58 ATOM 135 CA ARG A 15 198.559 178.543 216.623 1.00 31.16 ATOM 136 C ARG A 15 199.321 179.642 217.352 1.00 39.27 ATOM 137 O ARG A 15 200.000 180.437 216.691 1.00 41.64 ATOM 138 CB ARG A 15 197.224 178.840 215.968 1.00 34.43 ATOM 139 CG ARG A 15 196.273 179.877 216.372 1.00 41.18 ATOM 140 CD ARG A 15 195.319 179.445 215.316 1.00 42.01 ATOM 141 NE ARG A 15 194.068 180.116 215.021 1.00 35.21 ATOM 142 CZ ARG A 15 192.954 179.787 215.661 1.00 47.27 ATOM 143 NH1 ARG A 15 192.969 178.913 216.658 1.00 46.97 ATOM 144 NH2 ARG A 15 191.786 180.172 215.168 1.00 43.35 ATOM 145 N LYS A 16 199.233 179.722 218.679 1.00 41.55 ATOM 146 CA LYS A 16 200.251 180.487 219.400 1.00 40.11 ATOM 147 C LYS A 16 201.595 179.773 219.308 1.00 39.12 ATOM 148 O LYS A 16 202.653 180.409 219.216 1.00 40.48 ATOM 149 CB LYS A 16 199.860 180.698 220.858 1.00 42.45 ATOM 150 CG LYS A 16 199.227 182.040 221.144 1.00 41.19 ATOM 151 CD LYS A 16 199.217 182.322 222.634 1.00 45.27 ATOM 152 CE LYS A 16 199.215 183.813 222.910 1.00 43.66 ATOM 153 NZ LYS A 16 197.910 184.440 222.577 1.00 43.42 ATOM 154 N ARG A 17 201.557 178.438 219.336 1.00 37.69 ATOM 155 CA ARG A 17 202.763 177.636 219.165 1.00 32.23 ATOM 156 C ARG A 17 203.379 177.829 217.788 1.00 34.25 ATOM 157 O ARG A 17 204.603 177.930 217.660 1.00 45.15 ATOM 158 CB ARG A 17 202.438 176.161 219.386 1.00 34.77 ATOM 159 CG ARG A 17 202.465 175.703 220.823 1.00 35.28 ATOM 160 CD ARG A 17 202.596 174.192 220.887 1.00 38.38 ATOM 161 NE ARG A 17 202.278 173.651 222.201 1.00 37.06 ATOM 162 CZ ARG A 17 201.227 172.885 222.458 1.00 42.20 ATOM 163 NH1 ARG A 17 200.360 172.558 221.513 1.00 43.28 ATOM 164 NH2 ARG A 17 201.043 172.427 223.693 1.00 39.29 ATOM 165 N ARG A 18 202.558 177.874 216.746 1.00 35.47 ATOM 166 CA ARG A 18 203.065 178.002 215.387 1.00 33.13 ATOM 167 C ARG A 18 203.290 179.450 214.975 1.00 35.49 ATOM 168 O ARG A 18 203.772 179.699 213.866 1.00 39.13 ATOM 169 CB ARG A 18 202.116 177.311 214.403 1.00 36.20 ATOM 170 CG ARG A 18 200.965 178.162 213.923 1.00 33.86 ATOM 171 CD ARG A 18 200.309 177.539 212.705 1.00 36.66 ATOM 172 NE ARG A 18 198.911 177.931 212.568 1.00 41.34 ATOM 173 CZ ARG A 18 197.886 177.220 213.018 1.00 42.49 ATOM 174 NH1 ARG A 18 198.063 176.065 213.638 1.00 38.58 ATOM 175 NH2 ARG A 18 196.652 177.677 212.834 1.00 33.51 ATOM 176 N LYS A 19 202.957 180.404 215.839 1.00 43.23 ATOM 177 CA LYS A 19 203.366 181.787 215.643 1.00 40.86 ATOM 178 C LYS A 19 204.740 182.050 216.243 1.00 37.95 ATOM 179 O LYS A 19 205.573 182.709 215.615 1.00 44.10 ATOM 180 CB LYS A 19 202.336 182.735 216.258 1.00 43.84 ATOM 181 CG LYS A 19 202.648 184.204 216.054 1.00 40.16 ATOM 182 CD LYS A 19 201.534 185.080 216.593 1.00 42.54 ATOM 183 CE LYS A 19 201.905 186.552 216.526 1.00 43.65 ATOM 184 NZ LYS A 19 202.038 187.029 215.122 1.00 40.86 ATOM 185 N VAL A 20 204.991 181.546 217.455 1.00 37.48 ATOM 186 CA VAL A 20 206.317 181.682 218.049 1.00 44.71 ATOM 187 C VAL A 20 207.334 180.865 217.265 1.00 43.22 ATOM 188 O VAL A 20 208.516 181.221 217.207 1.00 44.89 ATOM 189 CB VAL A 20 206.290 181.293 219.540 1.00 38.12 ATOM 190 CG1 VAL A 20 206.043 179.811 219.714 1.00 40.44 ATOM 191 CG2 VAL A 20 207.583 181.698 220.222 1.00 39.38 ATOM 192 N ARG A 21 206.898 179.767 216.647 1.00 36.84 ATOM 193 CA ARG A 21 207.782 178.995 215.787 1.00 37.24 ATOM 194 C ARG A 21 208.131 179.743 214.509 1.00 41.61 ATOM 195 O ARG A 21 209.144 179.429 213.877 1.00 38.69 ATOM 196 CB ARG A 21 207.136 177.651 215.446 1.00 36.19 ATOM 197 CG ARG A 21 208.109 176.610 214.934 1.00 40.76 ATOM 198 CD ARG A 21 207.796 175.229 215.472 1.00 38.17 ATOM 199 NE ARG A 21 208.755 174.250 214.977 1.00 38.84 ATOM 200 CZ ARG A 21 208.434 173.148 214.315 1.00 36.99 ATOM 201 NH1 ARG A 21 207.174 172.822 214.088 1.00 39.61 ATOM 202 NH2 ARG A 21 209.402 172.348 213.881 1.00 40.56 ATOM 203 N ALA A 22 207.320 180.729 214.120 1.00 49.09 ATOM 204 CA ALA A 22 207.591 181.484 212.904 1.00 40.94 ATOM 205 C ALA A 22 208.705 182.502 213.097 1.00 42.67 ATOM 206 O ALA A 22 209.385 182.854 212.127 1.00 44.30 ATOM 207 CB ALA A 22 206.320 182.185 212.425 1.00 43.72 ATOM 208 N ARG A 23 208.904 182.993 214.323 1.00 48.18 ATOM 209 CA ARG A 23 209.967 183.964 214.555 1.00 46.77 ATOM 210 C ARG A 23 211.334 183.344 214.308 1.00 50.91 ATOM 211 O ARG A 23 212.256 184.029 213.854 1.00 49.10 ATOM 212 CB ARG A 23 209.883 184.526 215.978 1.00 48.73 ATOM 213 CG ARG A 23 208.634 185.363 216.243 1.00 49.94 ATOM 214 CD ARG A 23 208.534 185.878 217.685 1.00 50.73 ATOM 215 NE ARG A 23 209.574 186.828 218.076 1.00 48.24 ATOM 216 CZ ARG A 23 209.482 188.140 217.893 1.00 52.23 ATOM 217 NH1 ARG A 23 208.454 188.675 217.258 1.00 53.43 ATOM 218 NH2 ARG A 23 210.444 188.935 218.361 1.00 51.98 ATOM 219 N SER A 24 211.481 182.051 214.596 1.00 54.59 ATOM 220 CA SER A 24 212.759 181.368 214.456 1.00 54.14 ATOM 221 C SER A 24 213.019 180.866 213.043 1.00 53.60 ATOM 222 O SER A 24 214.157 180.491 212.739 1.00 54.92 ATOM 223 CB SER A 24 212.832 180.196 215.435 1.00 54.61 ATOM 224 OG SER A 24 212.798 180.653 216.776 1.00 57.64 ATOM 225 N LYS A 25 212.009 180.844 212.181 1.00 58.27 ATOM 226 CA LYS A 25 212.191 180.373 210.814 1.00 56.27 ATOM 227 C LYS A 25 212.897 181.424 209.967 1.00 59.73 ATOM 228 O LYS A 25 214.120 181.406 209.832 1.00 57.65 ATOM 229 CB LYS A 25 210.848 180.006 210.183 1.00 52.73 ATOM 230 CG LYS A 25 210.976 179.264 208.866 1.00 56.29 ATOM 231 CD LYS A 25 209.654 178.660 208.425 1.00 58.02 ATOM 232 CE LYS A 25 209.880 177.390 207.623 1.00 59.55 ATOM 233 NZ LYS A 25 208.643 176.910 206.955 1.00 57.82 TER