HEADER RIBOSOME 31-DEC-69 8EVP TITLE Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) TITLE 2 internal ribosome entry site (IRES), Structure I COMPND MOL_ID: 76; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 8EVP A 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET A 1 184.889 171.831 232.426 1.00 18.56 ATOM 2 CA MET A 1 185.075 172.594 231.201 1.00 19.23 ATOM 3 C MET A 1 184.700 171.689 230.035 1.00 18.50 ATOM 4 O MET A 1 185.250 170.590 229.940 1.00 20.59 ATOM 5 CB MET A 1 186.524 173.083 231.128 1.00 14.30 ATOM 6 CG MET A 1 186.892 173.954 229.950 1.00 15.53 ATOM 7 SD MET A 1 188.651 174.354 230.020 1.00 23.20 ATOM 8 CE MET A 1 188.714 175.832 229.018 1.00 15.12 ATOM 9 N ARG A 2 183.767 172.106 229.167 1.00 7.23 ATOM 10 CA ARG A 2 183.384 171.190 228.099 1.00 13.44 ATOM 11 C ARG A 2 184.533 171.086 227.106 1.00 8.67 ATOM 12 O ARG A 2 185.425 171.939 227.061 1.00 15.44 ATOM 13 CB ARG A 2 182.129 171.586 227.308 1.00 14.01 ATOM 14 CG ARG A 2 182.336 172.629 226.234 1.00 10.56 ATOM 15 CD ARG A 2 181.069 172.922 225.408 1.00 17.71 ATOM 16 NE ARG A 2 180.072 173.724 226.100 1.00 9.75 ATOM 17 CZ ARG A 2 178.897 174.046 225.579 1.00 13.51 ATOM 18 NH1 ARG A 2 178.588 173.739 224.331 1.00 7.62 ATOM 19 NH2 ARG A 2 178.037 174.756 226.303 1.00 18.71 ATOM 20 N ALA A 3 184.520 170.000 226.334 1.00 12.08 ATOM 21 CA ALA A 3 185.568 169.745 225.353 1.00 13.07 ATOM 22 C ALA A 3 185.804 170.907 224.390 1.00 11.57 ATOM 23 O ALA A 3 186.950 171.156 224.005 1.00 11.66 ATOM 24 CB ALA A 3 185.236 168.477 224.567 1.00 14.72 ATOM 25 N LYS A 4 184.756 171.647 224.004 1.00 4.81 ATOM 26 CA LYS A 4 184.970 172.690 223.002 1.00 11.31 ATOM 27 C LYS A 4 185.671 173.921 223.572 1.00 11.34 ATOM 28 O LYS A 4 186.377 174.612 222.830 1.00 13.72 ATOM 29 CB LYS A 4 183.651 173.090 222.328 1.00 9.68 ATOM 30 CG LYS A 4 183.000 174.356 222.832 1.00 9.50 ATOM 31 CD LYS A 4 181.593 174.522 222.294 1.00 6.87 ATOM 32 CE LYS A 4 181.587 174.819 220.823 1.00 8.85 ATOM 33 NZ LYS A 4 180.200 175.056 220.349 1.00 6.07 ATOM 34 N TRP A 5 185.503 174.223 224.865 1.00 11.95 ATOM 35 CA TRP A 5 186.275 175.320 225.443 1.00 9.05 ATOM 36 C TRP A 5 187.699 174.884 225.757 1.00 11.44 ATOM 37 O TRP A 5 188.619 175.708 225.719 1.00 7.62 ATOM 38 CB TRP A 5 185.589 175.880 226.694 1.00 11.57 ATOM 39 CG TRP A 5 184.140 176.339 226.535 1.00 8.07 ATOM 40 CD1 TRP A 5 183.158 176.216 227.470 1.00 9.70 ATOM 41 CD2 TRP A 5 183.531 177.017 225.411 1.00 11.71 ATOM 42 NE1 TRP A 5 181.983 176.744 227.005 1.00 13.14 ATOM 43 CE2 TRP A 5 182.183 177.241 225.746 1.00 9.01 ATOM 44 CE3 TRP A 5 183.990 177.447 224.159 1.00 7.84 ATOM 45 CZ2 TRP A 5 181.292 177.870 224.879 1.00 11.45 ATOM 46 CZ3 TRP A 5 183.102 178.061 223.302 1.00 4.67 ATOM 47 CH2 TRP A 5 181.768 178.263 223.663 1.00 8.89 ATOM 48 N ARG A 6 187.893 173.605 226.084 1.00 11.32 ATOM 49 CA ARG A 6 189.237 173.043 226.112 1.00 8.81 ATOM 50 C ARG A 6 189.855 173.082 224.721 1.00 10.79 ATOM 51 O ARG A 6 191.048 173.367 224.566 1.00 15.55 ATOM 52 CB ARG A 6 189.193 171.610 226.644 1.00 15.74 ATOM 53 CG ARG A 6 190.540 170.906 226.693 1.00 8.26 ATOM 54 CD ARG A 6 191.486 171.550 227.692 1.00 15.09 ATOM 55 NE ARG A 6 190.997 171.401 229.057 1.00 15.70 ATOM 56 CZ ARG A 6 191.480 172.050 230.106 1.00 16.32 ATOM 57 NH1 ARG A 6 192.464 172.925 229.985 1.00 18.42 ATOM 58 NH2 ARG A 6 190.962 171.817 231.309 1.00 16.86 ATOM 59 N LYS A 7 189.048 172.792 223.696 1.00 14.97 ATOM 60 CA LYS A 7 189.496 172.894 222.311 1.00 12.20 ATOM 61 C LYS A 7 189.817 174.335 221.930 1.00 8.03 ATOM 62 O LYS A 7 190.803 174.589 221.230 1.00 21.04 ATOM 63 CB LYS A 7 188.426 172.322 221.382 1.00 16.66 ATOM 64 CG LYS A 7 188.916 171.867 220.021 1.00 14.87 ATOM 65 CD LYS A 7 187.929 170.880 219.417 1.00 16.41 ATOM 66 CE LYS A 7 188.180 170.662 217.942 1.00 13.22 ATOM 67 NZ LYS A 7 187.529 171.713 217.124 1.00 18.88 ATOM 68 N LYS A 8 188.988 175.288 222.366 1.00 10.75 ATOM 69 CA LYS A 8 189.230 176.692 222.044 1.00 13.41 ATOM 70 C LYS A 8 190.482 177.218 222.734 1.00 9.21 ATOM 71 O LYS A 8 191.234 178.008 222.151 1.00 16.46 ATOM 72 CB LYS A 8 188.018 177.542 222.426 1.00 6.90 ATOM 73 CG LYS A 8 188.058 178.944 221.841 1.00 6.84 ATOM 74 CD LYS A 8 186.824 179.748 222.200 1.00 12.98 ATOM 75 CE LYS A 8 186.822 181.087 221.485 1.00 8.64 ATOM 76 NZ LYS A 8 186.560 180.951 220.030 1.00 14.99 ATOM 77 N ARG A 9 190.711 176.806 223.981 1.00 7.43 ATOM 78 CA ARG A 9 191.910 177.226 224.697 1.00 9.38 ATOM 79 C ARG A 9 193.163 176.625 224.075 1.00 11.36 ATOM 80 O ARG A 9 194.218 177.268 224.047 1.00 9.25 ATOM 81 CB ARG A 9 191.796 176.834 226.169 1.00 12.31 ATOM 82 CG ARG A 9 192.913 177.347 227.050 1.00 15.26 ATOM 83 CD ARG A 9 192.963 176.586 228.359 1.00 9.62 ATOM 84 NE ARG A 9 191.952 177.057 229.298 1.00 14.42 ATOM 85 CZ ARG A 9 191.869 176.673 230.563 1.00 10.00 ATOM 86 NH1 ARG A 9 192.729 175.811 231.080 1.00 11.58 ATOM 87 NH2 ARG A 9 190.900 177.166 231.328 1.00 11.98 ATOM 88 N THR A 10 193.066 175.397 223.570 1.00 14.69 ATOM 89 CA THR A 10 194.221 174.763 222.945 1.00 16.60 ATOM 90 C THR A 10 194.528 175.375 221.582 1.00 17.00 ATOM 91 O THR A 10 195.699 175.541 221.223 1.00 18.40 ATOM 92 CB THR A 10 193.986 173.260 222.820 1.00 15.55 ATOM 93 OG1 THR A 10 193.482 172.753 224.060 1.00 18.95 ATOM 94 CG2 THR A 10 195.284 172.563 222.517 1.00 16.05 ATOM 95 N ARG A 11 193.491 175.712 220.811 1.00 16.24 ATOM 96 CA ARG A 11 193.697 176.344 219.510 1.00 16.34 ATOM 97 C ARG A 11 194.351 177.710 219.643 1.00 16.16 ATOM 98 O ARG A 11 195.235 178.061 218.855 1.00 23.52 ATOM 99 CB ARG A 11 192.366 176.473 218.774 1.00 17.55 ATOM 100 CG ARG A 11 191.854 175.177 218.210 1.00 17.75 ATOM 101 CD ARG A 11 190.593 175.402 217.415 1.00 21.16 ATOM 102 NE ARG A 11 190.217 174.201 216.686 1.00 17.43 ATOM 103 CZ ARG A 11 189.460 174.195 215.600 1.00 18.29 ATOM 104 NH1 ARG A 11 188.945 175.311 215.111 1.00 18.62 ATOM 105 NH2 ARG A 11 189.220 173.041 214.986 1.00 21.78 ATOM 106 N ARG A 12 193.909 178.505 220.616 1.00 17.45 ATOM 107 CA ARG A 12 194.546 179.794 220.855 1.00 20.28 ATOM 108 C ARG A 12 195.967 179.616 221.371 1.00 18.78 ATOM 109 O ARG A 12 196.858 180.400 221.029 1.00 20.18 ATOM 110 CB ARG A 12 193.696 180.622 221.817 1.00 18.08 ATOM 111 CG ARG A 12 192.364 181.017 221.202 1.00 21.06 ATOM 112 CD ARG A 12 191.473 181.819 222.131 1.00 17.82 ATOM 113 NE ARG A 12 190.999 181.031 223.261 1.00 20.12 ATOM 114 CZ ARG A 12 190.316 181.526 224.283 1.00 22.73 ATOM 115 NH1 ARG A 12 189.984 182.806 224.337 1.00 20.45 ATOM 116 NH2 ARG A 12 189.942 180.714 225.267 1.00 20.14 ATOM 117 N LEU A 13 196.198 178.583 222.184 1.00 23.76 ATOM 118 CA LEU A 13 197.547 178.283 222.654 1.00 22.96 ATOM 119 C LEU A 13 198.459 177.848 221.511 1.00 23.03 ATOM 120 O LEU A 13 199.640 178.212 221.486 1.00 28.32 ATOM 121 CB LEU A 13 197.494 177.201 223.734 1.00 23.39 ATOM 122 CG LEU A 13 198.809 176.724 224.362 1.00 26.71 ATOM 123 CD1 LEU A 13 199.718 177.896 224.720 1.00 27.39 ATOM 124 CD2 LEU A 13 198.544 175.854 225.578 1.00 25.98 ATOM 125 N LYS A 14 197.933 177.065 220.562 1.00 23.18 ATOM 126 CA LYS A 14 198.752 176.562 219.460 1.00 22.11 ATOM 127 C LYS A 14 199.285 177.687 218.583 1.00 27.94 ATOM 128 O LYS A 14 200.443 177.652 218.155 1.00 29.44 ATOM 129 CB LYS A 14 197.946 175.577 218.614 1.00 25.27 ATOM 130 CG LYS A 14 197.893 174.164 219.166 1.00 27.47 ATOM 131 CD LYS A 14 196.832 173.331 218.459 1.00 23.39 ATOM 132 CE LYS A 14 197.014 173.370 216.949 1.00 28.50 ATOM 133 NZ LYS A 14 198.218 172.619 216.507 1.00 30.37 ATOM 134 N ARG A 15 198.465 178.694 218.305 1.00 26.79 ATOM 135 CA ARG A 15 198.919 179.851 217.547 1.00 22.03 ATOM 136 C ARG A 15 199.558 180.928 218.414 1.00 27.38 ATOM 137 O ARG A 15 199.890 182.000 217.899 1.00 31.63 ATOM 138 CB ARG A 15 197.786 180.402 216.678 1.00 24.47 ATOM 139 CG ARG A 15 196.582 180.977 217.365 1.00 23.64 ATOM 140 CD ARG A 15 195.581 181.337 216.279 1.00 24.68 ATOM 141 NE ARG A 15 194.373 181.964 216.791 1.00 28.67 ATOM 142 CZ ARG A 15 193.307 181.288 217.196 1.00 29.63 ATOM 143 NH1 ARG A 15 193.211 179.978 217.014 1.00 29.32 ATOM 144 NH2 ARG A 15 192.296 181.944 217.756 1.00 31.76 ATOM 145 N LYS A 16 199.739 180.673 219.709 1.00 29.21 ATOM 146 CA LYS A 16 200.801 181.364 220.431 1.00 32.21 ATOM 147 C LYS A 16 202.136 180.651 220.261 1.00 29.74 ATOM 148 O LYS A 16 203.183 181.309 220.240 1.00 27.76 ATOM 149 CB LYS A 16 200.463 181.496 221.918 1.00 28.15 ATOM 150 CG LYS A 16 199.167 182.227 222.213 1.00 29.42 ATOM 151 CD LYS A 16 199.391 183.713 222.442 1.00 31.12 ATOM 152 CE LYS A 16 198.079 184.418 222.760 1.00 30.77 ATOM 153 NZ LYS A 16 198.257 185.592 223.659 1.00 29.69 ATOM 154 N ARG A 17 202.126 179.320 220.140 1.00 28.27 ATOM 155 CA ARG A 17 203.373 178.587 219.944 1.00 28.29 ATOM 156 C ARG A 17 203.943 178.804 218.550 1.00 28.79 ATOM 157 O ARG A 17 205.156 178.968 218.392 1.00 35.43 ATOM 158 CB ARG A 17 203.176 177.092 220.191 1.00 29.02 ATOM 159 CG ARG A 17 202.499 176.723 221.486 1.00 24.14 ATOM 160 CD ARG A 17 202.452 175.215 221.622 1.00 25.74 ATOM 161 NE ARG A 17 202.428 174.786 223.013 1.00 27.70 ATOM 162 CZ ARG A 17 201.418 174.138 223.575 1.00 31.24 ATOM 163 NH1 ARG A 17 200.334 173.820 222.887 1.00 32.53 ATOM 164 NH2 ARG A 17 201.497 173.801 224.858 1.00 33.22 ATOM 165 N ARG A 18 203.100 178.785 217.518 1.00 29.29 ATOM 166 CA ARG A 18 203.643 179.006 216.185 1.00 26.67 ATOM 167 C ARG A 18 203.862 180.481 215.884 1.00 26.69 ATOM 168 O ARG A 18 204.445 180.803 214.844 1.00 28.50 ATOM 169 CB ARG A 18 202.757 178.357 215.115 1.00 29.35 ATOM 170 CG ARG A 18 201.365 178.921 214.952 1.00 26.95 ATOM 171 CD ARG A 18 200.657 178.208 213.807 1.00 25.36 ATOM 172 NE ARG A 18 199.306 178.706 213.580 1.00 28.97 ATOM 173 CZ ARG A 18 198.209 178.142 214.065 1.00 28.49 ATOM 174 NH1 ARG A 18 198.262 177.036 214.789 1.00 27.27 ATOM 175 NH2 ARG A 18 197.029 178.701 213.818 1.00 24.74 ATOM 176 N LYS A 19 203.416 181.376 216.766 1.00 32.46 ATOM 177 CA LYS A 19 203.798 182.779 216.663 1.00 30.77 ATOM 178 C LYS A 19 205.165 183.030 217.291 1.00 34.11 ATOM 179 O LYS A 19 205.959 183.816 216.764 1.00 36.28 ATOM 180 CB LYS A 19 202.734 183.658 217.322 1.00 33.51 ATOM 181 CG LYS A 19 203.077 185.137 217.374 1.00 35.33 ATOM 182 CD LYS A 19 202.154 185.883 218.327 1.00 36.01 ATOM 183 CE LYS A 19 202.437 187.374 218.318 1.00 35.61 ATOM 184 NZ LYS A 19 202.835 187.854 216.965 1.00 33.08 ATOM 185 N VAL A 20 205.466 182.364 218.408 1.00 37.29 ATOM 186 CA VAL A 20 206.783 182.524 219.016 1.00 33.66 ATOM 187 C VAL A 20 207.831 181.729 218.240 1.00 34.62 ATOM 188 O VAL A 20 209.012 182.094 218.230 1.00 38.37 ATOM 189 CB VAL A 20 206.741 182.150 220.513 1.00 32.11 ATOM 190 CG1 VAL A 20 206.505 180.667 220.718 1.00 32.92 ATOM 191 CG2 VAL A 20 208.003 182.606 221.231 1.00 35.95 ATOM 192 N ARG A 21 207.423 180.653 217.562 1.00 33.03 ATOM 193 CA ARG A 21 208.318 179.964 216.642 1.00 30.85 ATOM 194 C ARG A 21 208.578 180.780 215.384 1.00 32.88 ATOM 195 O ARG A 21 209.597 180.564 214.720 1.00 33.57 ATOM 196 CB ARG A 21 207.754 178.593 216.273 1.00 30.10 ATOM 197 CG ARG A 21 207.902 177.558 217.374 1.00 30.73 ATOM 198 CD ARG A 21 207.658 176.150 216.867 1.00 30.57 ATOM 199 NE ARG A 21 208.835 175.579 216.228 1.00 27.78 ATOM 200 CZ ARG A 21 208.828 174.459 215.519 1.00 28.71 ATOM 201 NH1 ARG A 21 207.713 173.780 215.312 1.00 31.74 ATOM 202 NH2 ARG A 21 209.967 174.011 215.003 1.00 30.25 ATOM 203 N ALA A 22 207.672 181.697 215.037 1.00 39.46 ATOM 204 CA ALA A 22 207.907 182.595 213.912 1.00 38.47 ATOM 205 C ALA A 22 209.037 183.578 214.200 1.00 39.56 ATOM 206 O ALA A 22 209.878 183.827 213.328 1.00 40.19 ATOM 207 CB ALA A 22 206.620 183.340 213.559 1.00 39.42 ATOM 208 N ARG A 23 209.064 184.167 215.402 1.00 47.04 ATOM 209 CA ARG A 23 210.186 185.030 215.772 1.00 45.85 ATOM 210 C ARG A 23 211.507 184.269 215.778 1.00 46.07 ATOM 211 O ARG A 23 212.521 184.784 215.288 1.00 49.07 ATOM 212 CB ARG A 23 209.964 185.696 217.137 1.00 46.51 ATOM 213 CG ARG A 23 211.100 186.686 217.444 1.00 47.70 ATOM 214 CD ARG A 23 211.065 187.469 218.766 1.00 47.53 ATOM 215 NE ARG A 23 210.023 188.451 219.026 1.00 47.99 ATOM 216 CZ ARG A 23 210.098 189.713 218.615 1.00 52.04 ATOM 217 NH1 ARG A 23 211.027 190.108 217.761 1.00 49.70 ATOM 218 NH2 ARG A 23 209.257 190.611 219.118 1.00 51.24 ATOM 219 N SER A 24 211.519 183.054 216.327 1.00 46.26 ATOM 220 CA SER A 24 212.776 182.321 216.478 1.00 45.53 ATOM 221 C SER A 24 213.394 181.966 215.130 1.00 45.46 ATOM 222 O SER A 24 214.617 182.009 214.976 1.00 48.09 ATOM 223 CB SER A 24 212.554 181.061 217.309 1.00 44.82 ATOM 224 OG SER A 24 211.538 180.253 216.748 1.00 46.37 ATOM 225 N LYS A 25 212.571 181.602 214.152 1.00 45.64 ATOM 226 CA LYS A 25 213.064 181.376 212.800 1.00 47.59 ATOM 227 C LYS A 25 213.509 182.693 212.177 1.00 48.41 ATOM 228 O LYS A 25 213.061 183.764 212.587 1.00 47.52 ATOM 229 CB LYS A 25 212.002 180.708 211.926 1.00 46.53 ATOM 230 CG LYS A 25 211.696 179.274 212.308 1.00 46.15 ATOM 231 CD LYS A 25 210.560 178.714 211.471 1.00 48.73 ATOM 232 CE LYS A 25 210.990 178.491 210.031 1.00 46.67 ATOM 233 NZ LYS A 25 211.995 177.399 209.921 1.00 46.59 TER