HEADER RIBOSOME 31-DEC-69 8EVS TITLE Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) TITLE 2 internal ribosome entry site (IRES), eEF2 and GDP, Structure II COMPND MOL_ID: 76; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: An; EXPDTA ELECTRON MICROSCOPY DBREF 8EVS A 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 An 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 An 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET A 1 184.700 170.958 232.529 1.00 29.08 ATOM 2 CA MET A 1 184.725 171.714 231.286 1.00 29.27 ATOM 3 C MET A 1 184.350 170.839 230.094 1.00 30.32 ATOM 4 O MET A 1 184.679 169.653 230.031 1.00 38.54 ATOM 5 CB MET A 1 186.084 172.406 231.131 1.00 20.13 ATOM 6 CG MET A 1 186.179 173.361 229.947 1.00 25.53 ATOM 7 SD MET A 1 187.692 174.352 229.870 1.00 23.53 ATOM 8 CE MET A 1 188.912 173.121 230.181 1.00 29.62 ATOM 9 N ARG A 2 183.666 171.470 229.143 1.00 12.06 ATOM 10 CA ARG A 2 183.270 170.817 227.905 1.00 14.33 ATOM 11 C ARG A 2 184.469 170.368 227.093 1.00 20.39 ATOM 12 O ARG A 2 185.559 170.937 227.174 1.00 17.60 ATOM 13 CB ARG A 2 182.438 171.770 227.050 1.00 17.45 ATOM 14 CG ARG A 2 180.989 171.832 227.404 1.00 9.74 ATOM 15 CD ARG A 2 180.258 172.782 226.494 1.00 7.72 ATOM 16 NE ARG A 2 179.639 172.169 225.326 1.00 21.61 ATOM 17 CZ ARG A 2 178.615 172.735 224.704 1.00 17.18 ATOM 18 NH1 ARG A 2 178.136 173.906 225.091 1.00 15.89 ATOM 19 NH2 ARG A 2 178.058 172.116 223.674 1.00 20.36 ATOM 20 N ALA A 3 184.234 169.342 226.279 1.00 17.61 ATOM 21 CA ALA A 3 185.195 168.962 225.258 1.00 17.23 ATOM 22 C ALA A 3 185.392 170.079 224.241 1.00 22.41 ATOM 23 O ALA A 3 186.504 170.275 223.736 1.00 24.98 ATOM 24 CB ALA A 3 184.739 167.678 224.570 1.00 17.81 ATOM 25 N LYS A 4 184.331 170.822 223.918 1.00 16.01 ATOM 26 CA LYS A 4 184.492 171.848 222.895 1.00 19.42 ATOM 27 C LYS A 4 185.216 173.066 223.436 1.00 20.96 ATOM 28 O LYS A 4 185.801 173.822 222.653 1.00 29.26 ATOM 29 CB LYS A 4 183.157 172.264 222.277 1.00 10.16 ATOM 30 CG LYS A 4 182.230 173.031 223.173 1.00 12.81 ATOM 31 CD LYS A 4 180.944 173.335 222.420 1.00 19.25 ATOM 32 CE LYS A 4 181.156 174.306 221.286 1.00 13.88 ATOM 33 NZ LYS A 4 179.870 174.661 220.626 1.00 7.29 ATOM 34 N TRP A 5 185.181 173.287 224.750 1.00 20.69 ATOM 35 CA TRP A 5 185.986 174.371 225.286 1.00 9.83 ATOM 36 C TRP A 5 187.424 173.915 225.490 1.00 13.04 ATOM 37 O TRP A 5 188.337 174.743 225.447 1.00 26.48 ATOM 38 CB TRP A 5 185.375 174.920 226.571 1.00 9.77 ATOM 39 CG TRP A 5 183.934 175.387 226.434 1.00 15.02 ATOM 40 CD1 TRP A 5 182.936 175.224 227.348 1.00 16.73 ATOM 41 CD2 TRP A 5 183.340 176.084 225.322 1.00 16.98 ATOM 42 NE1 TRP A 5 181.771 175.787 226.890 1.00 12.16 ATOM 43 CE2 TRP A 5 181.991 176.314 225.648 1.00 17.30 ATOM 44 CE3 TRP A 5 183.818 176.538 224.088 1.00 12.02 ATOM 45 CZ2 TRP A 5 181.117 176.970 224.789 1.00 17.85 ATOM 46 CZ3 TRP A 5 182.947 177.186 223.240 1.00 14.46 ATOM 47 CH2 TRP A 5 181.613 177.394 223.592 1.00 16.40 ATOM 48 N ARG A 6 187.652 172.617 225.713 1.00 21.15 ATOM 49 CA ARG A 6 189.012 172.111 225.583 1.00 27.57 ATOM 50 C ARG A 6 189.487 172.248 224.151 1.00 31.98 ATOM 51 O ARG A 6 190.626 172.651 223.893 1.00 34.26 ATOM 52 CB ARG A 6 189.090 170.629 225.950 1.00 23.72 ATOM 53 CG ARG A 6 188.744 170.211 227.337 1.00 28.17 ATOM 54 CD ARG A 6 189.757 170.760 228.299 1.00 34.54 ATOM 55 NE ARG A 6 191.101 170.243 228.107 1.00 37.06 ATOM 56 CZ ARG A 6 192.195 170.795 228.611 1.00 35.80 ATOM 57 NH1 ARG A 6 192.141 171.885 229.365 1.00 30.23 ATOM 58 NH2 ARG A 6 193.376 170.273 228.304 1.00 36.90 ATOM 59 N LYS A 7 188.599 171.945 223.207 1.00 22.28 ATOM 60 CA LYS A 7 188.927 172.047 221.797 1.00 17.92 ATOM 61 C LYS A 7 189.209 173.485 221.376 1.00 12.24 ATOM 62 O LYS A 7 190.162 173.738 220.629 1.00 28.64 ATOM 63 CB LYS A 7 187.786 171.438 220.980 1.00 23.16 ATOM 64 CG LYS A 7 188.031 171.315 219.501 1.00 25.37 ATOM 65 CD LYS A 7 186.767 170.810 218.823 1.00 15.66 ATOM 66 CE LYS A 7 187.007 170.507 217.364 1.00 20.66 ATOM 67 NZ LYS A 7 187.559 169.140 217.182 1.00 29.05 ATOM 68 N LYS A 8 188.427 174.445 221.869 1.00 18.94 ATOM 69 CA LYS A 8 188.638 175.825 221.443 1.00 20.37 ATOM 70 C LYS A 8 189.944 176.408 221.952 1.00 19.74 ATOM 71 O LYS A 8 190.694 177.023 221.187 1.00 32.59 ATOM 72 CB LYS A 8 187.481 176.697 221.916 1.00 13.16 ATOM 73 CG LYS A 8 187.703 178.181 221.688 1.00 18.04 ATOM 74 CD LYS A 8 186.601 178.997 222.325 1.00 25.40 ATOM 75 CE LYS A 8 185.537 179.355 221.317 1.00 21.45 ATOM 76 NZ LYS A 8 185.944 180.523 220.487 1.00 23.30 ATOM 77 N ARG A 9 190.249 176.228 223.230 1.00 24.96 ATOM 78 CA ARG A 9 191.443 176.877 223.728 1.00 31.44 ATOM 79 C ARG A 9 192.713 176.051 223.527 1.00 34.71 ATOM 80 O ARG A 9 193.801 176.582 223.725 1.00 40.29 ATOM 81 CB ARG A 9 191.224 177.409 225.159 1.00 32.87 ATOM 82 CG ARG A 9 190.815 176.556 226.343 1.00 30.81 ATOM 83 CD ARG A 9 190.877 177.600 227.449 1.00 35.31 ATOM 84 NE ARG A 9 190.388 177.308 228.793 1.00 39.57 ATOM 85 CZ ARG A 9 191.018 176.665 229.769 1.00 36.66 ATOM 86 NH1 ARG A 9 192.334 176.666 229.856 1.00 26.70 ATOM 87 NH2 ARG A 9 190.314 176.313 230.844 1.00 39.43 ATOM 88 N THR A 10 192.585 174.777 223.140 1.00 27.96 ATOM 89 CA THR A 10 193.777 174.079 222.671 1.00 34.42 ATOM 90 C THR A 10 194.026 174.380 221.204 1.00 29.38 ATOM 91 O THR A 10 195.141 174.208 220.724 1.00 30.08 ATOM 92 CB THR A 10 193.665 172.556 222.863 1.00 32.32 ATOM 93 OG1 THR A 10 194.965 171.962 222.759 1.00 31.84 ATOM 94 CG2 THR A 10 192.761 171.917 221.788 1.00 28.66 ATOM 95 N ARG A 11 192.992 174.865 220.505 1.00 23.08 ATOM 96 CA ARG A 11 193.194 175.442 219.184 1.00 24.00 ATOM 97 C ARG A 11 193.823 176.821 219.288 1.00 27.82 ATOM 98 O ARG A 11 194.616 177.206 218.423 1.00 30.21 ATOM 99 CB ARG A 11 191.870 175.519 218.436 1.00 27.28 ATOM 100 CG ARG A 11 191.634 174.374 217.473 1.00 31.81 ATOM 101 CD ARG A 11 190.192 174.338 217.013 1.00 26.09 ATOM 102 NE ARG A 11 189.843 173.079 216.369 1.00 29.89 ATOM 103 CZ ARG A 11 188.933 172.959 215.412 1.00 32.98 ATOM 104 NH1 ARG A 11 188.267 174.006 214.957 1.00 32.90 ATOM 105 NH2 ARG A 11 188.678 171.756 214.909 1.00 29.31 ATOM 106 N ARG A 12 193.485 177.567 220.339 1.00 31.98 ATOM 107 CA ARG A 12 194.137 178.842 220.600 1.00 31.82 ATOM 108 C ARG A 12 195.574 178.644 221.059 1.00 31.25 ATOM 109 O ARG A 12 196.440 179.477 220.771 1.00 34.50 ATOM 110 CB ARG A 12 193.342 179.617 221.651 1.00 32.78 ATOM 111 CG ARG A 12 192.021 180.167 221.133 1.00 33.43 ATOM 112 CD ARG A 12 191.107 180.604 222.267 1.00 36.85 ATOM 113 NE ARG A 12 190.161 181.628 221.837 1.00 40.84 ATOM 114 CZ ARG A 12 189.083 181.991 222.518 1.00 40.12 ATOM 115 NH1 ARG A 12 188.742 181.391 223.646 1.00 37.23 ATOM 116 NH2 ARG A 12 188.317 182.969 222.045 1.00 36.02 ATOM 117 N LEU A 13 195.848 177.546 221.766 1.00 28.94 ATOM 118 CA LEU A 13 197.217 177.227 222.142 1.00 35.00 ATOM 119 C LEU A 13 198.037 176.795 220.934 1.00 32.77 ATOM 120 O LEU A 13 199.213 177.158 220.814 1.00 35.46 ATOM 121 CB LEU A 13 197.226 176.138 223.212 1.00 36.37 ATOM 122 CG LEU A 13 198.598 175.803 223.791 1.00 33.51 ATOM 123 CD1 LEU A 13 199.169 177.012 224.499 1.00 39.29 ATOM 124 CD2 LEU A 13 198.507 174.619 224.730 1.00 37.10 ATOM 125 N LYS A 14 197.440 176.015 220.029 1.00 31.30 ATOM 126 CA LYS A 14 198.136 175.637 218.805 1.00 29.70 ATOM 127 C LYS A 14 198.427 176.849 217.939 1.00 28.31 ATOM 128 O LYS A 14 199.460 176.900 217.263 1.00 33.43 ATOM 129 CB LYS A 14 197.308 174.630 218.007 1.00 26.64 ATOM 130 CG LYS A 14 197.419 173.196 218.467 1.00 31.15 ATOM 131 CD LYS A 14 196.645 172.280 217.537 1.00 36.07 ATOM 132 CE LYS A 14 195.151 172.409 217.762 1.00 36.33 ATOM 133 NZ LYS A 14 194.370 171.443 216.943 1.00 32.38 ATOM 134 N ARG A 15 197.536 177.837 217.958 1.00 31.89 ATOM 135 CA ARG A 15 197.707 179.008 217.114 1.00 28.12 ATOM 136 C ARG A 15 198.830 179.892 217.635 1.00 28.22 ATOM 137 O ARG A 15 199.625 180.426 216.852 1.00 27.77 ATOM 138 CB ARG A 15 196.388 179.768 217.065 1.00 32.68 ATOM 139 CG ARG A 15 196.329 180.978 216.179 1.00 30.27 ATOM 140 CD ARG A 15 194.913 181.488 216.259 1.00 29.26 ATOM 141 NE ARG A 15 194.017 180.522 215.640 1.00 37.19 ATOM 142 CZ ARG A 15 192.694 180.579 215.689 1.00 38.44 ATOM 143 NH1 ARG A 15 192.066 181.606 216.234 1.00 34.74 ATOM 144 NH2 ARG A 15 191.985 179.571 215.190 1.00 37.66 ATOM 145 N LYS A 16 198.920 180.045 218.956 1.00 35.95 ATOM 146 CA LYS A 16 200.028 180.787 219.543 1.00 40.06 ATOM 147 C LYS A 16 201.338 180.019 219.424 1.00 39.02 ATOM 148 O LYS A 16 202.405 180.632 219.313 1.00 36.69 ATOM 149 CB LYS A 16 199.715 181.120 221.002 1.00 36.82 ATOM 150 CG LYS A 16 198.590 182.138 221.154 1.00 41.70 ATOM 151 CD LYS A 16 198.221 182.394 222.609 1.00 43.21 ATOM 152 CE LYS A 16 199.303 183.169 223.341 1.00 44.24 ATOM 153 NZ LYS A 16 199.426 184.563 222.836 1.00 40.58 ATOM 154 N ARG A 17 201.282 178.685 219.449 1.00 42.46 ATOM 155 CA ARG A 17 202.501 177.893 219.323 1.00 35.42 ATOM 156 C ARG A 17 203.091 177.998 217.924 1.00 36.12 ATOM 157 O ARG A 17 204.313 178.081 217.766 1.00 45.78 ATOM 158 CB ARG A 17 202.224 176.430 219.665 1.00 30.79 ATOM 159 CG ARG A 17 202.362 176.086 221.132 1.00 37.08 ATOM 160 CD ARG A 17 202.574 174.595 221.316 1.00 39.09 ATOM 161 NE ARG A 17 201.328 173.843 221.261 1.00 39.34 ATOM 162 CZ ARG A 17 200.830 173.145 222.272 1.00 42.80 ATOM 163 NH1 ARG A 17 201.451 173.077 223.437 1.00 43.14 ATOM 164 NH2 ARG A 17 199.683 172.493 222.106 1.00 37.79 ATOM 165 N ARG A 18 202.246 177.975 216.895 1.00 36.37 ATOM 166 CA ARG A 18 202.742 178.091 215.532 1.00 38.22 ATOM 167 C ARG A 18 202.992 179.535 215.118 1.00 41.95 ATOM 168 O ARG A 18 203.520 179.766 214.026 1.00 44.29 ATOM 169 CB ARG A 18 201.771 177.412 214.561 1.00 39.62 ATOM 170 CG ARG A 18 200.576 178.244 214.146 1.00 39.04 ATOM 171 CD ARG A 18 199.747 177.497 213.114 1.00 36.14 ATOM 172 NE ARG A 18 198.425 178.082 212.932 1.00 41.93 ATOM 173 CZ ARG A 18 197.299 177.537 213.371 1.00 42.13 ATOM 174 NH1 ARG A 18 197.300 176.409 214.061 1.00 41.19 ATOM 175 NH2 ARG A 18 196.144 178.141 213.114 1.00 38.97 ATOM 176 N LYS A 19 202.626 180.504 215.955 1.00 47.09 ATOM 177 CA LYS A 19 203.090 181.874 215.789 1.00 40.86 ATOM 178 C LYS A 19 204.441 182.104 216.456 1.00 39.63 ATOM 179 O LYS A 19 205.307 182.773 215.885 1.00 44.23 ATOM 180 CB LYS A 19 202.055 182.851 216.349 1.00 41.92 ATOM 181 CG LYS A 19 202.456 184.307 216.238 1.00 40.57 ATOM 182 CD LYS A 19 201.786 185.147 217.309 1.00 44.18 ATOM 183 CE LYS A 19 201.428 186.523 216.775 1.00 47.38 ATOM 184 NZ LYS A 19 202.622 187.241 216.250 1.00 46.31 ATOM 185 N VAL A 20 204.642 181.551 217.656 1.00 40.17 ATOM 186 CA VAL A 20 205.912 181.726 218.349 1.00 40.00 ATOM 187 C VAL A 20 206.994 180.867 217.716 1.00 43.25 ATOM 188 O VAL A 20 208.186 181.153 217.872 1.00 44.80 ATOM 189 CB VAL A 20 205.768 181.411 219.851 1.00 39.76 ATOM 190 CG1 VAL A 20 205.589 179.921 220.077 1.00 43.29 ATOM 191 CG2 VAL A 20 206.967 181.932 220.628 1.00 40.43 ATOM 192 N ARG A 21 206.606 179.819 216.995 1.00 46.76 ATOM 193 CA ARG A 21 207.562 179.065 216.203 1.00 47.28 ATOM 194 C ARG A 21 207.876 179.751 214.883 1.00 44.33 ATOM 195 O ARG A 21 208.938 179.502 214.306 1.00 48.59 ATOM 196 CB ARG A 21 207.034 177.651 215.957 1.00 40.59 ATOM 197 CG ARG A 21 208.116 176.592 215.954 1.00 44.36 ATOM 198 CD ARG A 21 207.572 175.230 215.584 1.00 45.91 ATOM 199 NE ARG A 21 208.639 174.322 215.186 1.00 48.22 ATOM 200 CZ ARG A 21 208.466 173.248 214.430 1.00 46.86 ATOM 201 NH1 ARG A 21 207.271 172.907 213.980 1.00 45.35 ATOM 202 NH2 ARG A 21 209.518 172.498 214.120 1.00 48.27 ATOM 203 N ALA A 22 206.983 180.615 214.399 1.00 43.52 ATOM 204 CA ALA A 22 207.249 181.358 213.174 1.00 44.23 ATOM 205 C ALA A 22 208.242 182.494 213.387 1.00 47.06 ATOM 206 O ALA A 22 208.993 182.827 212.465 1.00 42.90 ATOM 207 CB ALA A 22 205.945 181.909 212.599 1.00 48.53 ATOM 208 N ARG A 23 208.275 183.097 214.580 1.00 51.07 ATOM 209 CA ARG A 23 209.250 184.159 214.809 1.00 50.94 ATOM 210 C ARG A 23 210.660 183.595 214.898 1.00 49.59 ATOM 211 O ARG A 23 211.624 184.286 214.552 1.00 53.47 ATOM 212 CB ARG A 23 208.912 184.971 216.070 1.00 50.73 ATOM 213 CG ARG A 23 207.597 185.747 215.966 1.00 50.68 ATOM 214 CD ARG A 23 207.204 186.578 217.209 1.00 50.54 ATOM 215 NE ARG A 23 208.075 187.720 217.495 1.00 52.70 ATOM 216 CZ ARG A 23 208.915 187.815 218.520 1.00 52.81 ATOM 217 NH1 ARG A 23 209.075 186.820 219.375 1.00 48.53 ATOM 218 NH2 ARG A 23 209.591 188.951 218.705 1.00 52.88 ATOM 219 N SER A 24 210.805 182.348 215.354 1.00 58.04 ATOM 220 CA SER A 24 212.115 181.706 215.367 1.00 55.11 ATOM 221 C SER A 24 212.532 181.217 213.988 1.00 52.10 ATOM 222 O SER A 24 213.729 181.190 213.683 1.00 49.82 ATOM 223 CB SER A 24 212.125 180.535 216.351 1.00 58.20 ATOM 224 OG SER A 24 211.258 179.501 215.921 1.00 56.95 ATOM 225 N LYS A 25 211.577 180.821 213.154 1.00 60.43 ATOM 226 CA LYS A 25 211.875 180.367 211.802 1.00 57.96 ATOM 227 C LYS A 25 212.503 181.486 210.979 1.00 57.37 ATOM 228 O LYS A 25 213.363 181.244 210.135 1.00 58.26 ATOM 229 CB LYS A 25 210.606 179.858 211.115 1.00 56.14 ATOM 230 CG LYS A 25 210.829 179.345 209.702 1.00 58.67 ATOM 231 CD LYS A 25 209.525 178.906 209.057 1.00 59.77 ATOM 232 CE LYS A 25 208.553 180.068 208.961 1.00 59.61 ATOM 233 NZ LYS A 25 209.126 181.207 208.199 1.00 56.23 TER