HEADER TRANSCRIPTION/DNA 31-DEC-69 8SSQ TITLE ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 35mer DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: Zinc finger domains ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.12 ANGSTORMS DBREF 8SSQ A 319 606 UNP P49711 CTCF_HUMAN 319 606 SEQRES 1 A 28 THR ARG PRO HIS LYS CYS PRO ASP CYS ASP MET ALA PHE SEQRES 2 A 28 VAL THR SER GLY GLU LEU VAL ARG HIS ARG ARG TYR LYS SEQRES 3 A 28 HIS THR ATOM 1 N THR A 1 -71.856 -10.030 -21.767 1.00240.24 ATOM 2 CA THR A 1 -71.073 -8.851 -21.416 1.00246.32 ATOM 3 C THR A 1 -71.535 -8.263 -20.086 1.00246.28 ATOM 4 O THR A 1 -71.297 -7.088 -19.803 1.00244.51 ATOM 5 CB THR A 1 -71.164 -7.767 -22.507 1.00241.46 ATOM 6 N ARG A 2 -72.187 -9.095 -19.279 1.00249.17 ATOM 7 CA ARG A 2 -72.740 -8.695 -17.990 1.00249.24 ATOM 8 C ARG A 2 -73.617 -7.446 -18.094 1.00249.24 ATOM 9 O ARG A 2 -73.279 -6.394 -17.539 1.00246.22 ATOM 10 CB ARG A 2 -71.627 -8.484 -16.970 1.00243.34 ATOM 11 CG ARG A 2 -70.941 -9.760 -16.512 1.00231.48 ATOM 12 CD ARG A 2 -69.964 -9.473 -15.384 1.00227.23 ATOM 13 NE ARG A 2 -69.414 -10.693 -14.805 1.00227.43 ATOM 14 CZ ARG A 2 -68.605 -10.723 -13.754 1.00234.49 ATOM 15 NH1 ARG A 2 -68.229 -9.614 -13.140 1.00227.17 ATOM 16 NH2 ARG A 2 -68.165 -11.896 -13.309 1.00239.66 ATOM 17 N PRO A 3 -74.746 -7.521 -18.808 1.00257.53 ATOM 18 CA PRO A 3 -75.630 -6.347 -18.894 1.00257.77 ATOM 19 C PRO A 3 -76.173 -5.896 -17.550 1.00253.53 ATOM 20 O PRO A 3 -76.355 -4.690 -17.338 1.00236.75 ATOM 21 CB PRO A 3 -76.755 -6.821 -19.827 1.00245.12 ATOM 22 CG PRO A 3 -76.185 -7.995 -20.561 1.00243.72 ATOM 23 CD PRO A 3 -75.272 -8.659 -19.580 1.00243.56 ATOM 24 N HIS A 4 -76.438 -6.824 -16.634 1.00254.29 ATOM 25 CA HIS A 4 -77.004 -6.473 -15.339 1.00245.38 ATOM 26 C HIS A 4 -75.906 -6.072 -14.363 1.00237.70 ATOM 27 O HIS A 4 -74.861 -6.722 -14.277 1.00234.71 ATOM 28 CB HIS A 4 -77.808 -7.644 -14.771 1.00230.96 ATOM 29 CG HIS A 4 -78.967 -8.052 -15.625 1.00229.50 ATOM 30 ND1 HIS A 4 -78.822 -8.815 -16.764 1.00231.97 ATOM 31 CD2 HIS A 4 -80.293 -7.802 -15.508 1.00220.03 ATOM 32 CE1 HIS A 4 -80.008 -9.018 -17.310 1.00213.19 ATOM 33 NE2 HIS A 4 -80.917 -8.413 -16.567 1.00211.09 ATOM 34 N LYS A 5 -76.145 -4.986 -13.632 1.00237.42 ATOM 35 CA LYS A 5 -75.207 -4.493 -12.635 1.00238.31 ATOM 36 C LYS A 5 -75.959 -4.136 -11.363 1.00238.64 ATOM 37 O LYS A 5 -77.094 -3.652 -11.417 1.00235.86 ATOM 38 CB LYS A 5 -74.434 -3.271 -13.149 1.00243.83 ATOM 39 CG LYS A 5 -73.604 -3.535 -14.396 1.00246.74 ATOM 40 CD LYS A 5 -72.860 -2.287 -14.840 1.00237.82 ATOM 41 CE LYS A 5 -72.062 -2.542 -16.107 1.00232.27 ATOM 42 NZ LYS A 5 -71.070 -3.637 -15.923 1.00233.62 ATOM 43 N CYS A 6 -75.326 -4.379 -10.222 1.00237.57 ATOM 44 CA CYS A 6 -75.924 -4.029 -8.940 1.00231.42 ATOM 45 C CYS A 6 -75.635 -2.567 -8.624 1.00229.19 ATOM 46 O CYS A 6 -74.464 -2.174 -8.583 1.00230.34 ATOM 47 CB CYS A 6 -75.384 -4.922 -7.831 1.00231.17 ATOM 48 SG CYS A 6 -76.107 -4.606 -6.203 1.00232.14 ATOM 49 N PRO A 7 -76.654 -1.732 -8.406 1.00226.96 ATOM 50 CA PRO A 7 -76.387 -0.323 -8.083 1.00225.72 ATOM 51 C PRO A 7 -75.828 -0.113 -6.687 1.00229.10 ATOM 52 O PRO A 7 -75.218 0.934 -6.436 1.00223.46 ATOM 53 CB PRO A 7 -77.762 0.337 -8.237 1.00219.11 ATOM 54 CG PRO A 7 -78.728 -0.763 -7.943 1.00220.19 ATOM 55 CD PRO A 7 -78.097 -2.025 -8.471 1.00225.24 ATOM 56 N ASP A 8 -76.012 -1.068 -5.774 1.00234.83 ATOM 57 CA ASP A 8 -75.577 -0.875 -4.396 1.00229.17 ATOM 58 C ASP A 8 -74.070 -1.035 -4.230 1.00224.00 ATOM 59 O ASP A 8 -73.481 -0.395 -3.351 1.00217.61 ATOM 60 CB ASP A 8 -76.316 -1.847 -3.474 1.00224.50 ATOM 61 CG ASP A 8 -77.817 -1.635 -3.489 1.00223.88 ATOM 62 OD1 ASP A 8 -78.253 -0.476 -3.652 1.00220.23 ATOM 63 OD2 ASP A 8 -78.562 -2.627 -3.340 1.00221.60 ATOM 64 N CYS A 9 -73.430 -1.870 -5.046 1.00226.12 ATOM 65 CA CYS A 9 -71.995 -2.112 -4.932 1.00220.78 ATOM 66 C CYS A 9 -71.404 -2.216 -6.335 1.00218.85 ATOM 67 O CYS A 9 -72.034 -1.846 -7.329 1.00228.48 ATOM 68 CB CYS A 9 -71.708 -3.367 -4.097 1.00217.06 ATOM 69 SG CYS A 9 -72.247 -4.917 -4.853 1.00200.59 ATOM 70 N ASP A 10 -70.173 -2.718 -6.407 1.00208.80 ATOM 71 CA ASP A 10 -69.419 -2.792 -7.651 1.00221.66 ATOM 72 C ASP A 10 -69.692 -4.053 -8.462 1.00226.08 ATOM 73 O ASP A 10 -69.250 -4.134 -9.613 1.00219.94 ATOM 74 CB ASP A 10 -67.919 -2.708 -7.352 1.00236.44 ATOM 75 CG ASP A 10 -67.475 -3.726 -6.318 1.00238.33 ATOM 76 OD1 ASP A 10 -68.351 -4.388 -5.722 1.00240.22 ATOM 77 OD2 ASP A 10 -66.253 -3.867 -6.101 1.00227.18 ATOM 78 N MET A 11 -70.399 -5.030 -7.902 1.00226.41 ATOM 79 CA MET A 11 -70.559 -6.313 -8.571 1.00231.68 ATOM 80 C MET A 11 -71.507 -6.203 -9.761 1.00223.64 ATOM 81 O MET A 11 -72.522 -5.502 -9.709 1.00218.59 ATOM 82 CB MET A 11 -71.073 -7.362 -7.586 1.00228.77 ATOM 83 CG MET A 11 -70.121 -7.677 -6.435 1.00216.12 ATOM 84 SD MET A 11 -68.709 -8.703 -6.900 1.00204.82 ATOM 85 CE MET A 11 -67.455 -7.464 -7.226 1.00220.65 ATOM 86 N ALA A 12 -71.165 -6.907 -10.839 1.00227.24 ATOM 87 CA ALA A 12 -71.991 -6.993 -12.035 1.00224.65 ATOM 88 C ALA A 12 -72.220 -8.458 -12.375 1.00232.62 ATOM 89 O ALA A 12 -71.291 -9.268 -12.314 1.00234.04 ATOM 90 CB ALA A 12 -71.341 -6.270 -13.221 1.00228.93 ATOM 91 N PHE A 13 -73.457 -8.794 -12.735 1.00232.07 ATOM 92 CA PHE A 13 -73.858 -10.178 -12.940 1.00224.14 ATOM 93 C PHE A 13 -74.518 -10.340 -14.303 1.00229.90 ATOM 94 O PHE A 13 -75.033 -9.385 -14.888 1.00229.04 ATOM 95 CB PHE A 13 -74.802 -10.655 -11.826 1.00216.58 ATOM 96 CG PHE A 13 -74.098 -10.986 -10.540 1.00214.95 ATOM 97 CD1 PHE A 13 -73.521 -9.989 -9.771 1.00213.90 ATOM 98 CD2 PHE A 13 -74.011 -12.296 -10.101 1.00215.34 ATOM 99 CE1 PHE A 13 -72.868 -10.293 -8.593 1.00215.13 ATOM 100 CE2 PHE A 13 -73.364 -12.605 -8.920 1.00205.41 ATOM 101 CZ PHE A 13 -72.788 -11.603 -8.168 1.00214.36 ATOM 102 N VAL A 14 -74.494 -11.575 -14.803 1.00230.38 ATOM 103 CA VAL A 14 -74.987 -11.850 -16.150 1.00229.26 ATOM 104 C VAL A 14 -76.510 -11.919 -16.168 1.00220.63 ATOM 105 O VAL A 14 -77.177 -11.127 -16.844 1.00233.60 ATOM 106 CB VAL A 14 -74.362 -13.146 -16.696 1.00221.26 ATOM 107 CG1 VAL A 14 -74.902 -13.453 -18.084 1.00217.86 ATOM 108 CG2 VAL A 14 -72.845 -13.035 -16.719 1.00217.66 ATOM 109 N THR A 15 -77.080 -12.863 -15.428 1.00214.23 ATOM 110 CA THR A 15 -78.517 -13.092 -15.429 1.00214.38 ATOM 111 C THR A 15 -79.185 -12.357 -14.272 1.00214.67 ATOM 112 O THR A 15 -78.539 -11.943 -13.307 1.00199.98 ATOM 113 CB THR A 15 -78.830 -14.589 -15.344 1.00211.11 ATOM 114 OG1 THR A 15 -78.350 -15.110 -14.098 1.00213.25 ATOM 115 CG2 THR A 15 -78.167 -15.338 -16.489 1.00215.33 ATOM 116 N SER A 16 -80.505 -12.197 -14.390 1.00224.11 ATOM 117 CA SER A 16 -81.270 -11.542 -13.333 1.00216.42 ATOM 118 C SER A 16 -81.270 -12.372 -12.055 1.00220.87 ATOM 119 O SER A 16 -81.176 -11.821 -10.952 1.00213.69 ATOM 120 CB SER A 16 -82.700 -11.282 -13.804 1.00207.94 ATOM 121 OG SER A 16 -83.374 -12.497 -14.081 1.00212.68 ATOM 122 N GLY A 17 -81.378 -13.696 -12.184 1.00221.20 ATOM 123 CA GLY A 17 -81.383 -14.548 -11.005 1.00219.22 ATOM 124 C GLY A 17 -80.088 -14.474 -10.220 1.00199.44 ATOM 125 O GLY A 17 -80.098 -14.467 -8.987 1.00197.04 ATOM 126 N GLU A 18 -78.954 -14.427 -10.924 1.00198.85 ATOM 127 CA GLU A 18 -77.670 -14.279 -10.246 1.00196.39 ATOM 128 C GLU A 18 -77.589 -12.952 -9.502 1.00202.11 ATOM 129 O GLU A 18 -77.098 -12.895 -8.368 1.00198.75 ATOM 130 CB GLU A 18 -76.526 -14.394 -11.254 1.00196.23 ATOM 131 CG GLU A 18 -76.258 -15.803 -11.749 1.00200.18 ATOM 132 CD GLU A 18 -75.141 -15.849 -12.773 1.00202.90 ATOM 133 OE1 GLU A 18 -74.823 -14.790 -13.355 1.00200.64 ATOM 134 OE2 GLU A 18 -74.578 -16.941 -12.993 1.00204.13 ATOM 135 N LEU A 19 -78.061 -11.871 -10.127 1.00209.59 ATOM 136 CA LEU A 19 -78.025 -10.565 -9.477 1.00201.88 ATOM 137 C LEU A 19 -78.960 -10.519 -8.274 1.00197.87 ATOM 138 O LEU A 19 -78.638 -9.894 -7.256 1.00199.94 ATOM 139 CB LEU A 19 -78.381 -9.470 -10.482 1.00212.31 ATOM 140 CG LEU A 19 -78.167 -8.031 -10.011 1.00208.25 ATOM 141 CD1 LEU A 19 -76.720 -7.821 -9.598 1.00206.32 ATOM 142 CD2 LEU A 19 -78.566 -7.045 -11.097 1.00224.29 ATOM 143 N VAL A 20 -80.125 -11.164 -8.375 1.00204.06 ATOM 144 CA VAL A 20 -81.058 -11.199 -7.251 1.00202.32 ATOM 145 C VAL A 20 -80.444 -11.943 -6.072 1.00202.07 ATOM 146 O VAL A 20 -80.530 -11.494 -4.922 1.00198.42 ATOM 147 CB VAL A 20 -82.396 -11.826 -7.685 1.00193.07 ATOM 148 CG1 VAL A 20 -83.236 -12.184 -6.468 1.00193.84 ATOM 149 CG2 VAL A 20 -83.157 -10.869 -8.588 1.00194.47 ATOM 150 N ARG A 21 -79.814 -13.090 -6.337 1.00198.26 ATOM 151 CA ARG A 21 -79.145 -13.829 -5.272 1.00192.08 ATOM 152 C ARG A 21 -78.007 -13.014 -4.670 1.00190.68 ATOM 153 O ARG A 21 -77.791 -13.038 -3.453 1.00199.79 ATOM 154 CB ARG A 21 -78.627 -15.166 -5.806 1.00195.02 ATOM 155 CG ARG A 21 -77.774 -15.946 -4.812 1.00192.26 ATOM 156 CD ARG A 21 -76.659 -16.693 -5.520 1.00193.64 ATOM 157 NE ARG A 21 -77.121 -17.954 -6.087 1.00198.68 ATOM 158 CZ ARG A 21 -76.564 -18.562 -7.126 1.00203.30 ATOM 159 NH1 ARG A 21 -75.518 -18.047 -7.751 1.00203.28 ATOM 160 NH2 ARG A 21 -77.078 -19.711 -7.555 1.00206.03 ATOM 161 N HIS A 22 -77.269 -12.284 -5.511 1.00195.64 ATOM 162 CA HIS A 22 -76.187 -11.440 -5.012 1.00187.39 ATOM 163 C HIS A 22 -76.710 -10.356 -4.078 1.00192.87 ATOM 164 O HIS A 22 -76.110 -10.089 -3.030 1.00208.68 ATOM 165 CB HIS A 22 -75.435 -10.808 -6.180 1.00198.49 ATOM 166 CG HIS A 22 -74.692 -9.562 -5.812 1.00192.99 ATOM 167 ND1 HIS A 22 -73.545 -9.577 -5.048 1.00199.24 ATOM 168 CD2 HIS A 22 -74.940 -8.261 -6.094 1.00198.50 ATOM 169 CE1 HIS A 22 -73.115 -8.339 -4.880 1.00208.31 ATOM 170 NE2 HIS A 22 -73.943 -7.522 -5.505 1.00204.84 ATOM 171 N ARG A 23 -77.820 -9.712 -4.448 1.00192.96 ATOM 172 CA ARG A 23 -78.405 -8.694 -3.579 1.00192.73 ATOM 173 C ARG A 23 -78.835 -9.291 -2.247 1.00196.39 ATOM 174 O ARG A 23 -78.629 -8.684 -1.190 1.00208.05 ATOM 175 CB ARG A 23 -79.591 -8.022 -4.270 1.00209.54 ATOM 176 CG ARG A 23 -79.216 -6.893 -5.214 1.00206.69 ATOM 177 CD ARG A 23 -80.457 -6.154 -5.693 1.00206.74 ATOM 178 NE ARG A 23 -81.241 -5.628 -4.582 1.00209.39 ATOM 179 CZ ARG A 23 -81.200 -4.371 -4.161 1.00204.67 ATOM 180 NH1 ARG A 23 -80.432 -3.469 -4.751 1.00210.67 ATOM 181 NH2 ARG A 23 -81.951 -4.008 -3.125 1.00186.18 ATOM 182 N ARG A 24 -79.440 -10.479 -2.277 1.00193.42 ATOM 183 CA ARG A 24 -79.837 -11.133 -1.035 1.00196.51 ATOM 184 C ARG A 24 -78.624 -11.493 -0.187 1.00204.03 ATOM 185 O ARG A 24 -78.659 -11.377 1.044 1.00221.72 ATOM 186 CB ARG A 24 -80.672 -12.376 -1.341 1.00208.60 ATOM 187 CG ARG A 24 -81.973 -12.080 -2.071 1.00200.60 ATOM 188 CD ARG A 24 -82.753 -13.353 -2.356 1.00197.33 ATOM 189 NE ARG A 24 -84.042 -13.074 -2.976 1.00207.06 ATOM 190 CZ ARG A 24 -85.155 -12.813 -2.303 1.00211.04 ATOM 191 NH1 ARG A 24 -85.171 -12.785 -0.981 1.00214.30 ATOM 192 NH2 ARG A 24 -86.278 -12.574 -2.974 1.00199.31 ATOM 193 N TYR A 25 -77.541 -11.938 -0.827 1.00208.02 ATOM 194 CA TYR A 25 -76.354 -12.349 -0.084 1.00192.73 ATOM 195 C TYR A 25 -75.674 -11.166 0.596 1.00186.99 ATOM 196 O TYR A 25 -75.381 -11.213 1.797 1.00198.51 ATOM 197 CB TYR A 25 -75.373 -13.060 -1.016 1.00188.66 ATOM 198 CG TYR A 25 -75.367 -14.562 -0.859 1.00190.99 ATOM 199 CD1 TYR A 25 -76.130 -15.178 0.124 1.00190.18 ATOM 200 CD2 TYR A 25 -74.590 -15.362 -1.684 1.00187.83 ATOM 201 CE1 TYR A 25 -76.125 -16.550 0.275 1.00192.17 ATOM 202 CE2 TYR A 25 -74.578 -16.733 -1.540 1.00190.91 ATOM 203 CZ TYR A 25 -75.347 -17.323 -0.559 1.00194.94 ATOM 204 OH TYR A 25 -75.338 -18.691 -0.412 1.00203.69 ATOM 205 N LYS A 26 -75.417 -10.093 -0.153 1.00182.25 ATOM 206 CA LYS A 26 -74.558 -9.017 0.319 1.00187.36 ATOM 207 C LYS A 26 -75.247 -7.665 0.445 1.00198.52 ATOM 208 O LYS A 26 -74.602 -6.704 0.879 1.00192.42 ATOM 209 CB LYS A 26 -73.343 -8.869 -0.609 1.00177.96 ATOM 210 CG LYS A 26 -72.227 -9.870 -0.353 1.00181.00 ATOM 211 CD LYS A 26 -71.680 -9.728 1.058 1.00178.92 ATOM 212 CE LYS A 26 -70.330 -10.413 1.202 1.00187.23 ATOM 213 NZ LYS A 26 -69.909 -10.528 2.626 1.00194.86 ATOM 214 N HIS A 27 -76.515 -7.549 0.083 1.00215.30 ATOM 215 CA HIS A 27 -77.123 -6.223 0.140 1.00220.41 ATOM 216 C HIS A 27 -78.425 -6.173 0.924 1.00222.98 ATOM 217 O HIS A 27 -78.665 -5.193 1.632 1.00226.09 ATOM 218 CB HIS A 27 -77.346 -5.699 -1.286 1.00230.99 ATOM 219 CG HIS A 27 -76.100 -5.181 -1.931 1.00232.69 ATOM 220 ND1 HIS A 27 -75.110 -4.539 -1.219 1.00234.68 ATOM 221 CD2 HIS A 27 -75.676 -5.216 -3.217 1.00238.05 ATOM 222 CE1 HIS A 27 -74.133 -4.196 -2.038 1.00238.42 ATOM 223 NE2 HIS A 27 -74.452 -4.595 -3.256 1.00237.81 ATOM 224 N THR A 28 -79.269 -7.198 0.825 1.00226.01 ATOM 225 CA THR A 28 -80.517 -7.193 1.579 1.00230.69 ATOM 226 C THR A 28 -80.393 -7.924 2.906 1.00231.11 ATOM 227 O THR A 28 -81.072 -7.558 3.873 1.00232.59 ATOM 228 CB THR A 28 -81.645 -7.823 0.758 1.00235.13 ATOM 229 OG1 THR A 28 -81.548 -9.251 0.823 1.00226.73 ATOM 230 CG2 THR A 28 -81.560 -7.377 -0.693 1.00237.81 ATOM 231 ZN ZN A -74.420 -5.621 -4.999 1.00216.42 TER