HEADER TRANSCRIPTION/DNA 31-DEC-69 8SSU TITLE ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 19mer DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Transcriptional repressor CTCF,LIM domain-binding protein COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: Zinc finger domains 3-11 of CTCF, Residues 195-258 of ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.89 ANGSTORMS DBREF 8SSU A 320 582 UNP P49711 CTCF_HUMAN 320 582 DBREF 8SSU A 601 664 UNP Q86U70 LDB1_HUMAN 195 258 SEQRES 1 A 30 GLU ASN VAL ALA LYS PHE HIS CYS PRO HIS CYS ASP THR SEQRES 2 A 30 VAL ILE ALA ARG LYS SER ASP LEU GLY VAL HIS LEU ARG SEQRES 3 A 30 LYS GLN HIS SER ATOM 1 N GLU A 113 57.127 -25.493 44.917 1.00132.35 ATOM 2 CA GLU A 113 57.898 -24.749 45.901 1.00129.98 ATOM 3 C GLU A 113 58.388 -23.433 45.305 1.00137.67 ATOM 4 O GLU A 113 58.270 -23.179 44.103 1.00135.17 ATOM 5 CB GLU A 113 59.083 -25.580 46.402 1.00130.08 ATOM 6 CG GLU A 113 58.712 -26.979 46.856 1.00142.24 ATOM 7 CD GLU A 113 59.850 -27.685 47.573 1.00158.63 ATOM 8 OE1 GLU A 113 60.882 -27.035 47.841 1.00154.96 ATOM 9 OE2 GLU A 113 59.713 -28.890 47.870 1.00158.47 ATOM 10 N ASN A 114 58.945 -22.590 46.178 1.00130.80 ATOM 11 CA ASN A 114 59.481 -21.280 45.797 1.00129.88 ATOM 12 C ASN A 114 58.432 -20.433 45.082 1.00135.89 ATOM 13 O ASN A 114 58.730 -19.713 44.127 1.00139.70 ATOM 14 CB ASN A 114 60.740 -21.422 44.938 1.00127.15 ATOM 15 CG ASN A 114 61.893 -22.045 45.695 1.00145.52 ATOM 16 OD1 ASN A 114 62.057 -23.265 45.705 1.00166.47 ATOM 17 ND2 ASN A 114 62.701 -21.209 46.336 1.00141.20 ATOM 18 N VAL A 115 57.192 -20.520 45.548 1.00126.56 ATOM 19 CA VAL A 115 56.105 -19.740 44.969 1.00133.12 ATOM 20 C VAL A 115 56.212 -18.300 45.456 1.00131.33 ATOM 21 O VAL A 115 56.409 -18.045 46.650 1.00124.11 ATOM 22 CB VAL A 115 54.743 -20.357 45.324 1.00138.85 ATOM 23 CG1 VAL A 115 54.494 -21.597 44.479 1.00111.16 ATOM 24 CG2 VAL A 115 54.686 -20.708 46.804 1.00138.91 ATOM 25 N ALA A 116 56.099 -17.354 44.527 1.00136.36 ATOM 26 CA ALA A 116 56.215 -15.938 44.860 1.00129.86 ATOM 27 C ALA A 116 54.965 -15.488 45.605 1.00124.03 ATOM 28 O ALA A 116 53.886 -15.376 45.015 1.00117.77 ATOM 29 CB ALA A 116 56.426 -15.113 43.594 1.00120.64 ATOM 30 N LYS A 117 55.107 -15.229 46.901 1.00113.22 ATOM 31 CA LYS A 117 54.002 -14.780 47.733 1.00103.56 ATOM 32 C LYS A 117 54.050 -13.266 47.891 1.00108.81 ATOM 33 O LYS A 117 55.124 -12.659 47.924 1.00118.90 ATOM 34 CB LYS A 117 54.038 -15.462 49.101 1.00 96.35 ATOM 35 CG LYS A 117 54.037 -16.979 49.008 1.00 99.62 ATOM 36 CD LYS A 117 53.519 -17.628 50.277 1.00101.63 ATOM 37 CE LYS A 117 53.376 -19.130 50.092 1.00110.83 ATOM 38 NZ LYS A 117 52.736 -19.783 51.265 1.00119.51 ATOM 39 N PHE A 118 52.871 -12.662 47.989 1.00104.47 ATOM 40 CA PHE A 118 52.721 -11.214 47.940 1.00100.39 ATOM 41 C PHE A 118 52.609 -10.643 49.346 1.00101.73 ATOM 42 O PHE A 118 51.882 -11.181 50.187 1.00103.66 ATOM 43 CB PHE A 118 51.492 -10.832 47.117 1.00 87.30 ATOM 44 CG PHE A 118 51.448 -11.485 45.769 1.00102.99 ATOM 45 CD1 PHE A 118 50.829 -12.712 45.601 1.00101.94 ATOM 46 CD2 PHE A 118 52.035 -10.878 44.673 1.00101.09 ATOM 47 CE1 PHE A 118 50.792 -13.319 44.366 1.00 97.93 ATOM 48 CE2 PHE A 118 51.999 -11.480 43.433 1.00 96.01 ATOM 49 CZ PHE A 118 51.377 -12.702 43.280 1.00110.26 ATOM 50 N HIS A 119 53.330 -9.555 49.591 1.00101.51 ATOM 51 CA HIS A 119 53.293 -8.857 50.865 1.00102.21 ATOM 52 C HIS A 119 52.362 -7.658 50.760 1.00101.29 ATOM 53 O HIS A 119 52.312 -6.987 49.725 1.00 95.31 ATOM 54 CB HIS A 119 54.692 -8.395 51.279 1.00106.05 ATOM 55 CG HIS A 119 55.674 -9.513 51.452 1.00129.72 ATOM 56 ND1 HIS A 119 55.941 -10.433 50.460 1.00131.62 ATOM 57 CD2 HIS A 119 56.459 -9.853 52.501 1.00135.24 ATOM 58 CE1 HIS A 119 56.845 -11.294 50.893 1.00138.02 ATOM 59 NE2 HIS A 119 57.176 -10.965 52.128 1.00149.30 ATOM 60 N CYS A 120 51.613 -7.406 51.823 1.00 96.64 ATOM 61 CA CYS A 120 50.755 -6.230 51.852 1.00 93.71 ATOM 62 C CYS A 120 51.614 -4.974 51.947 1.00 92.31 ATOM 63 O CYS A 120 52.523 -4.913 52.782 1.00 92.77 ATOM 64 CB CYS A 120 49.783 -6.291 53.024 1.00 90.44 ATOM 65 SG CYS A 120 48.771 -4.805 53.192 1.00 88.01 ATOM 66 N PRO A 121 51.382 -3.969 51.100 1.00 98.70 ATOM 67 CA PRO A 121 52.170 -2.730 51.208 1.00 93.15 ATOM 68 C PRO A 121 51.931 -1.965 52.498 1.00 98.24 ATOM 69 O PRO A 121 52.816 -1.218 52.937 1.00105.17 ATOM 70 CB PRO A 121 51.722 -1.926 49.980 1.00 91.75 ATOM 71 CG PRO A 121 50.370 -2.465 49.647 1.00102.91 ATOM 72 CD PRO A 121 50.406 -3.919 49.999 1.00 96.55 ATOM 73 N HIS A 122 50.767 -2.130 53.123 1.00 97.43 ATOM 74 CA HIS A 122 50.404 -1.355 54.304 1.00 96.27 ATOM 75 C HIS A 122 50.680 -2.083 55.611 1.00 88.86 ATOM 76 O HIS A 122 51.120 -1.455 56.579 1.00123.85 ATOM 77 CB HIS A 122 48.924 -0.960 54.242 1.00103.21 ATOM 78 CG HIS A 122 48.577 -0.102 53.063 1.00112.18 ATOM 79 ND1 HIS A 122 48.675 -0.548 51.763 1.00 98.76 ATOM 80 CD2 HIS A 122 48.135 1.176 52.989 1.00104.87 ATOM 81 CE1 HIS A 122 48.309 0.417 50.938 1.00 88.39 ATOM 82 NE2 HIS A 122 47.977 1.474 51.657 1.00 98.76 ATOM 83 N CYS A 123 50.441 -3.390 55.667 1.00 94.27 ATOM 84 CA CYS A 123 50.668 -4.179 56.869 1.00 87.15 ATOM 85 C CYS A 123 51.619 -5.331 56.567 1.00 83.49 ATOM 86 O CYS A 123 51.893 -5.659 55.411 1.00 96.36 ATOM 87 CB CYS A 123 49.348 -4.711 57.442 1.00 95.48 ATOM 88 SG CYS A 123 48.603 -6.048 56.491 1.00103.83 ATOM 89 N ASP A 124 52.124 -5.951 57.633 1.00106.78 ATOM 90 CA ASP A 124 53.112 -7.023 57.511 1.00122.38 ATOM 91 C ASP A 124 52.410 -8.383 57.506 1.00118.58 ATOM 92 O ASP A 124 52.464 -9.161 58.460 1.00126.57 ATOM 93 CB ASP A 124 54.140 -6.925 58.631 1.00100.97 ATOM 94 N THR A 125 51.741 -8.664 56.388 1.00 89.63 ATOM 95 CA THR A 125 51.100 -9.953 56.172 1.00101.70 ATOM 96 C THR A 125 51.469 -10.478 54.791 1.00108.08 ATOM 97 O THR A 125 51.763 -9.707 53.872 1.00108.90 ATOM 98 CB THR A 125 49.567 -9.871 56.312 1.00 97.02 ATOM 99 OG1 THR A 125 49.027 -11.193 56.419 1.00105.65 ATOM 100 CG2 THR A 125 48.946 -9.188 55.106 1.00 97.54 ATOM 101 N VAL A 126 51.464 -11.802 54.657 1.00 98.22 ATOM 102 CA VAL A 126 51.831 -12.477 53.419 1.00 97.47 ATOM 103 C VAL A 126 50.628 -13.262 52.914 1.00 99.04 ATOM 104 O VAL A 126 49.932 -13.924 53.693 1.00111.29 ATOM 105 CB VAL A 126 53.054 -13.399 53.610 1.00100.07 ATOM 106 CG1 VAL A 126 54.296 -12.568 53.888 1.00113.14 ATOM 107 CG2 VAL A 126 52.814 -14.390 54.741 1.00105.73 ATOM 108 N ILE A 127 50.377 -13.174 51.610 1.00 82.63 ATOM 109 CA ILE A 127 49.218 -13.796 50.985 1.00 83.09 ATOM 110 C ILE A 127 49.691 -14.692 49.848 1.00100.37 ATOM 111 O ILE A 127 50.599 -14.327 49.093 1.00101.61 ATOM 112 CB ILE A 127 48.216 -12.745 50.465 1.00 89.49 ATOM 113 CG1 ILE A 127 48.017 -11.630 51.494 1.00 88.23 ATOM 114 CG2 ILE A 127 46.885 -13.398 50.159 1.00 89.28 ATOM 115 CD1 ILE A 127 47.285 -12.070 52.732 1.00 85.83 ATOM 116 N ALA A 128 49.068 -15.866 49.728 1.00 93.54 ATOM 117 CA ALA A 128 49.438 -16.810 48.679 1.00 88.32 ATOM 118 C ALA A 128 48.935 -16.351 47.313 1.00 87.99 ATOM 119 O ALA A 128 49.722 -16.176 46.377 1.00 95.15 ATOM 120 CB ALA A 128 48.896 -18.201 49.013 1.00 92.99 ATOM 121 N ARG A 129 47.625 -16.154 47.183 1.00 89.40 ATOM 122 CA ARG A 129 47.035 -15.730 45.919 1.00 75.77 ATOM 123 C ARG A 129 47.116 -14.216 45.769 1.00 79.28 ATOM 124 O ARG A 129 46.945 -13.472 46.739 1.00 78.49 ATOM 125 CB ARG A 129 45.572 -16.167 45.833 1.00 78.84 ATOM 126 CG ARG A 129 45.258 -17.508 46.473 1.00 91.76 ATOM 127 CD ARG A 129 45.656 -18.673 45.590 1.00 85.85 ATOM 128 NE ARG A 129 45.053 -19.919 46.050 1.00 92.63 ATOM 129 CZ ARG A 129 45.545 -20.677 47.020 1.00103.21 ATOM 130 NH1 ARG A 129 46.648 -20.341 47.668 1.00108.23 ATOM 131 NH2 ARG A 129 44.913 -21.800 47.350 1.00 99.27 ATOM 132 N LYS A 130 47.366 -13.759 44.539 1.00 93.83 ATOM 133 CA LYS A 130 47.361 -12.321 44.281 1.00 88.62 ATOM 134 C LYS A 130 45.974 -11.727 44.492 1.00 81.01 ATOM 135 O LYS A 130 45.833 -10.652 45.086 1.00 77.22 ATOM 136 CB LYS A 130 47.853 -12.033 42.863 1.00 86.08 ATOM 137 CG LYS A 130 47.849 -10.552 42.518 1.00 85.98 ATOM 138 CD LYS A 130 48.241 -10.298 41.072 1.00 76.85 ATOM 139 CE LYS A 130 48.143 -8.816 40.737 1.00 75.98 ATOM 140 NZ LYS A 130 48.534 -8.531 39.328 1.00 91.09 ATOM 141 N SER A 131 44.936 -12.415 44.011 1.00 77.72 ATOM 142 CA SER A 131 43.576 -11.906 44.154 1.00 73.57 ATOM 143 C SER A 131 43.152 -11.818 45.615 1.00 83.79 ATOM 144 O SER A 131 42.390 -10.917 45.982 1.00 79.45 ATOM 145 CB SER A 131 42.607 -12.788 43.370 1.00 61.01 ATOM 146 OG SER A 131 42.902 -14.162 43.553 1.00 64.97 ATOM 147 N ASP A 132 43.629 -12.737 46.460 1.00 76.12 ATOM 148 CA ASP A 132 43.306 -12.664 47.882 1.00 82.85 ATOM 149 C ASP A 132 43.936 -11.443 48.541 1.00 82.98 ATOM 150 O ASP A 132 43.391 -10.919 49.519 1.00 81.32 ATOM 151 CB ASP A 132 43.749 -13.943 48.593 1.00 74.20 ATOM 152 CG ASP A 132 42.787 -15.095 48.377 1.00 85.87 ATOM 153 OD1 ASP A 132 41.601 -14.837 48.080 1.00108.07 ATOM 154 OD2 ASP A 132 43.214 -16.259 48.516 1.00 79.56 ATOM 155 N LEU A 133 45.084 -10.987 48.035 1.00 79.05 ATOM 156 CA LEU A 133 45.645 -9.727 48.509 1.00 69.71 ATOM 157 C LEU A 133 44.719 -8.563 48.180 1.00 73.23 ATOM 158 O LEU A 133 44.579 -7.626 48.974 1.00 83.80 ATOM 159 CB LEU A 133 47.030 -9.503 47.903 1.00 73.34 ATOM 160 CG LEU A 133 47.717 -8.174 48.230 1.00 74.58 ATOM 161 CD1 LEU A 133 47.838 -7.980 49.734 1.00 85.58 ATOM 162 CD2 LEU A 133 49.084 -8.101 47.566 1.00 77.83 ATOM 163 N GLY A 134 44.083 -8.601 47.008 1.00 63.72 ATOM 164 CA GLY A 134 43.085 -7.593 46.694 1.00 66.64 ATOM 165 C GLY A 134 41.913 -7.624 47.655 1.00 64.55 ATOM 166 O GLY A 134 41.416 -6.577 48.078 1.00 71.69 ATOM 167 N VAL A 135 41.462 -8.826 48.020 1.00 64.29 ATOM 168 CA VAL A 135 40.394 -8.957 49.008 1.00 68.37 ATOM 169 C VAL A 135 40.839 -8.379 50.345 1.00 75.76 ATOM 170 O VAL A 135 40.068 -7.700 51.035 1.00 71.83 ATOM 171 CB VAL A 135 39.974 -10.433 49.144 1.00 65.72 ATOM 172 CG1 VAL A 135 38.786 -10.572 50.082 1.00 62.76 ATOM 173 CG2 VAL A 135 39.654 -11.013 47.783 1.00 78.66 ATOM 174 N HIS A 136 42.088 -8.649 50.734 1.00 75.26 ATOM 175 CA HIS A 136 42.633 -8.081 51.962 1.00 68.17 ATOM 176 C HIS A 136 42.668 -6.559 51.898 1.00 64.81 ATOM 177 O HIS A 136 42.290 -5.880 52.859 1.00 83.58 ATOM 178 CB HIS A 136 44.034 -8.645 52.209 1.00 78.47 ATOM 179 CG HIS A 136 44.755 -8.011 53.359 1.00 77.75 ATOM 180 ND1 HIS A 136 44.491 -8.332 54.672 1.00 90.78 ATOM 181 CD2 HIS A 136 45.742 -7.085 53.390 1.00 80.91 ATOM 182 CE1 HIS A 136 45.279 -7.626 55.464 1.00 83.51 ATOM 183 NE2 HIS A 136 46.048 -6.862 54.711 1.00 69.77 ATOM 184 N LEU A 137 43.113 -6.005 50.769 1.00 65.22 ATOM 185 CA LEU A 137 43.180 -4.554 50.634 1.00 67.19 ATOM 186 C LEU A 137 41.792 -3.926 50.643 1.00 73.46 ATOM 187 O LEU A 137 41.581 -2.883 51.274 1.00 76.04 ATOM 188 CB LEU A 137 43.931 -4.187 49.356 1.00 64.05 ATOM 189 CG LEU A 137 45.412 -4.568 49.349 1.00 71.47 ATOM 190 CD1 LEU A 137 46.012 -4.389 47.964 1.00 76.71 ATOM 191 CD2 LEU A 137 46.176 -3.751 50.379 1.00 79.79 ATOM 192 N ARG A 138 40.831 -4.544 49.953 1.00 75.80 ATOM 193 CA ARG A 138 39.490 -3.971 49.889 1.00 72.75 ATOM 194 C ARG A 138 38.770 -4.054 51.230 1.00 74.31 ATOM 195 O ARG A 138 37.971 -3.169 51.554 1.00 89.91 ATOM 196 CB ARG A 138 38.671 -4.663 48.795 1.00 71.93 ATOM 197 CG ARG A 138 39.105 -4.301 47.379 1.00 84.25 ATOM 198 CD ARG A 138 38.157 -4.856 46.323 1.00 66.10 ATOM 199 NE ARG A 138 38.270 -6.301 46.160 1.00 63.04 ATOM 200 CZ ARG A 138 39.167 -6.897 45.386 1.00 76.26 ATOM 201 NH1 ARG A 138 40.076 -6.202 44.722 1.00 80.77 ATOM 202 NH2 ARG A 138 39.151 -8.224 45.274 1.00 64.35 ATOM 203 N LYS A 139 39.035 -5.095 52.020 1.00 67.05 ATOM 204 CA LYS A 139 38.349 -5.289 53.293 1.00 77.10 ATOM 205 C LYS A 139 39.043 -4.570 54.447 1.00 75.25 ATOM 206 O LYS A 139 38.388 -3.883 55.238 1.00 70.73 ATOM 207 CB LYS A 139 38.230 -6.787 53.599 1.00 75.46 ATOM 208 CG LYS A 139 37.902 -7.112 55.055 1.00 89.98 ATOM 209 CD LYS A 139 36.480 -6.708 55.433 1.00 79.49 ATOM 210 CE LYS A 139 35.626 -7.928 55.759 1.00 63.09 ATOM 211 NZ LYS A 139 34.212 -7.561 56.055 1.00 63.62 ATOM 212 N GLN A 140 40.366 -4.708 54.553 1.00 67.08 ATOM 213 CA GLN A 140 41.069 -4.214 55.731 1.00 66.35 ATOM 214 C GLN A 140 41.403 -2.732 55.619 1.00 74.53 ATOM 215 O GLN A 140 41.184 -1.969 56.566 1.00 86.82 ATOM 216 CB GLN A 140 42.345 -5.026 55.962 1.00 71.97 ATOM 217 CG GLN A 140 42.254 -5.998 57.125 1.00 81.15 ATOM 218 CD GLN A 140 41.084 -6.949 56.991 1.00 84.94 ATOM 219 OE1 GLN A 140 40.122 -6.882 57.756 1.00 92.28 ATOM 220 NE2 GLN A 140 41.158 -7.844 56.013 1.00 95.75 ATOM 221 N HIS A 141 41.937 -2.306 54.477 1.00 66.87 ATOM 222 CA HIS A 141 42.565 -0.997 54.367 1.00 68.51 ATOM 223 C HIS A 141 41.712 0.044 53.655 1.00 68.04 ATOM 224 O HIS A 141 42.128 1.204 53.569 1.00 72.68 ATOM 225 CB HIS A 141 43.915 -1.132 53.657 1.00 68.99 ATOM 226 CG HIS A 141 44.871 -2.051 54.351 1.00 81.45 ATOM 227 ND1 HIS A 141 44.782 -2.341 55.696 1.00 81.28 ATOM 228 CD2 HIS A 141 45.933 -2.751 53.886 1.00 81.84 ATOM 229 CE1 HIS A 141 45.750 -3.175 56.029 1.00 85.89 ATOM 230 NE2 HIS A 141 46.463 -3.439 54.949 1.00 72.23 ATOM 231 N SER A 142 40.537 -0.323 53.152 1.00 66.21 ATOM 232 CA SER A 142 39.704 0.640 52.447 1.00 73.66 ATOM 233 C SER A 142 38.984 1.555 53.430 1.00 72.86 ATOM 234 O SER A 142 38.583 1.140 54.521 1.00 78.42 ATOM 235 CB SER A 142 38.681 -0.069 51.559 1.00 82.54 ATOM 236 OG SER A 142 37.665 -0.682 52.335 1.00 84.93 ATOM 237 ZN ZN A 47.285 -5.278 54.832 1.00 76.35 TER